Daphnia pulex (common water flea): DAPPUDRAFT_300823
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Entry
DAPPUDRAFT_300823 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K05636
laminin, beta 1
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
DAPPUDRAFT_300823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
cobW
Motif
Other DBs
NCBI-ProteinID:
EFX84988
JGI:
Dappu1_300823
UniProt:
E9G6I3
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MDSKFSLLVLIVVVATCLTTGVVSQRPHPCEQSSCYPATGNLLLGREMRLSSSSTCGLQK
KEKYCIVSHLEDKKKCFWCDSRPEQVNSPSSHHIQNILYRYTPTSRRRSWWQAQNGVENV
SIQLDLEAEFHFTHLIMTFKTFRPAALLIERSYDFGRTWKIYRYFAYNCAESFPGVSREP
PRNLTEVICESRYSGVAPSTEGEVIFRVLPPNLPIDDPYSQEVQNLLKMTNLRVNFTKLH
TLGDDLLDNREEIQDKYYYAIYDMVVRGSCSCYGHASRCLPLPGVDERTDMVHGRCECTH
NTKGLNCEQCEDFYHDLPWRPAIGRQTNACKRCNCNQHSDQCHFDPAVYEATGRISGGVC
DDCNHNTMGRNCEQCKAFFYQDPTKAISDADVCLPCDCDPRGSLDDGICDARSDPSGGVQ
AGQCHCKRFVEGRRCDQCQHGYWNFTEENPDGCQVCSCNLLGTYENQGCNVYSGECVCKR
YVTGRDCDQCLPEHWGLSEARDGCKACECDPGGSYDNNCDLLTGQCKCRPHVTGRTCSQP
EQGYFAGLLDYKIYEAEYGGISDRAQLQIREPYRDRDPSWTGPGFVRAVEDSSIQFTLDA
ISQSMEYDLVIRYEPQLSGQWEDVRVVVERPGEVDPDGPCANQFNQQGPPSGGLEISRVS
LPSGARHAVIYPPTCLETGKKYNVRLEFKSYDSNQETPSAAVLIDSITVVPRAGSIPFLG
GSPAADYRRQEFDHYRCAQYFYSVVKTNIPEVCKKHLYSIGFYVLGSGFECQCDPTGSSS
SICDSLGGQCSCKPNVVGRRCDQCAPGTFGFGPEGCSPCECNPVGSLDNFCDSGTGQCRC
RPNTYGRVCDQCQPGYWNFPSCQRCECNGHADLCDSRTGRCLDCRDFTTDDHCDRCLDSY
YGDPRLGVDIPCRACPCPGTIDSGHSYAPRCSLDRETQDVICECQEGYAGPRCDVCADNY
FGNPEVLGGQCRPCQCSNNIDLSRPGNCAGKSGECLQCLFNTEGFSCEVCQKGFFGDALS
QQCTPCVCNLLGSDSSLEGPSVCNRQTGQCPCLPNVEGLSCDRCAVDHWKIASGEGCEAC
SCDPVGSLSTQCNEFDGQCECREGFGGRKCDQCRANYWGNPSDNSCRPCLCDPLGSATQQ
CHHATGACVCLPGMGGEKCDRCARGYVGAIVPDCQPCGECFDNWDRILQELRGQTEQVVV
AAGQIRETGATGAYTREFETMENKLSDVRALLLNTTLSGHELSQLEELFSSIKTNLTMAG
QGMDGLDATVENTTQRVFSVVLALSNLRSKATDLQTAAQSLKNNATKLQEANVEGALNLT
REARQRSQKAQDRVEFTQQPVSDSERQRRRTEALLSRVAPQLGESQQRNAADLADLGGRL
AVIERSLPELNDVVCDGRGDPCDSLCGGGGCGKCGALSCDEGSVTKAENALSLAKEAEGI
LRNRQSESEEMMRGVRQAEVEAEAARVMAREALLAAELAQNRSEAAKAEVDELMNQIDEY
LEQSGASPADIRSLATDVLSKGISLQPEQITDLARRINETISSLTNIDAILAETSGDLAS
AKALKDRADAAKAHAQGILTVAQQVLDSLAAAKAAQDKAEEAIQTADKDISAAELHLTQI
ASETADAQAKASESVQEVEGLRERLKELQRKLIKNERDVKEAARESDVAASLASRAGQGA
SELDTAYQRALKALEEKTARSGDARERSARLQDKANRLSASVFAKVQELKEMEDEYLLHE
RRLTDLSDQVMAMNVRMTDYLQVISDRSEFYRTCQK
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaattcagtctactcgtgctcatcgttgtcgttgcaacctgcttaacaacc
ggtgtggtgtcgcaaaggccgcatccatgcgagcagagttcctgttacccggccacgggc
aatttgttgctcggcagggaaatgcgtttgtcctcttcgtccacttgcggtctccaaaag
aaggaaaaatattgcatcgtttcccatttggaagataagaaaaagtgtttctggtgtgac
tcgaggccggagcaggtcaacagtcccagcagccatcacattcagaacattctctaccgt
tataccccgacgtctcgccggcgatcttggtggcaagcgcaaaacggtgttgagaacgtc
agcatccagctggacctggaggccgaattccattttactcacttgatcatgacgttcaag
acctttagaccggccgctttacttatcgagcgctcttatgatttcggacgcacatggaag
atttatcgctactttgcttacaattgcgctgaatcattcccgggtgtgtctcgtgagccc
ccgcgtaatctgacggaagtcatttgcgaatcgcgctactctggcgtcgctccttcaact
gaaggtgaggtcatcttccgcgttttgccgcccaatttgcccatcgacgatccttactcg
caagaggtccagaatctcctcaaaatgaccaacttgcgcgtcaatttcaccaaactgcac
actctcggtgacgatctccttgacaacagggaggagatccaggacaagtactactacgcc
atttatgacatggtggtgagaggttcttgctcgtgttacggtcacgcttctcgctgtttg
cccttgcctggtgtagacgagcggacggacatggttcatggtcgctgcgaatgtactcac
aacaccaagggtctcaattgcgagcagtgtgaagatttctaccacgatctgccctggagg
ccggccattggtcgccagaccaacgcgtgcaaacgctgtaattgtaaccaacattcagac
cagtgtcatttcgacccggccgtctacgaagccactgggcgcatctctggtggtgtttgc
gacgattgtaaccacaacactatgggccgaaactgcgaacagtgcaaagctttcttctac
caggatcctaccaaggcgattagcgatgccgacgtttgtttgccatgcgactgcgatcct
cgcggttcattggatgatggcatctgcgatgctcgctctgatccttctggtggcgtccag
gccggtcagtgtcactgcaaacgtttcgtggaaggtcgccgttgcgatcaatgccagcac
ggatactggaacttcaccgaagagaacccagacggttgccaggtgtgcagctgtaatttg
ctgggcacttacgaaaatcaaggttgcaacgtctacagtggcgaatgcgtctgcaaacgc
tacgtgactgggcgtgactgcgaccaatgtctgcccgaacactggggcctgtcggaggct
cgtgatggctgcaaggcttgcgagtgtgaccctggaggctcctacgacaacaactgcgat
ctgttgactggtcagtgcaaatgccgaccgcatgtcactggacgcacttgctctcaacca
gagcagggctacttcgctggattgctcgactacaaaatctacgaggccgaatatggaggc
atttccgatcgtgcccagctccagatccgtgaaccctacagagatcgtgatcccagttgg
actggacctggcttcgttcgtgctgtcgaagactcttccatccaattcactctggatgcc
atcagccaatcgatggaatacgatttggttattcgttacgagcctcagctgtccggtcaa
tgggaagacgttcgtgtcgtcgtcgaacgacccggtgaagtcgatccggacggaccttgc
gccaatcaatttaatcaacaagggccacctagtggcggtctagaaatatcgagagtttca
ctcccatccggcgctcgtcacgctgtcatctatccgcccacttgcctggaaaccggaaaa
aaatacaacgtccggctggaattcaagtcgtacgactccaaccaagaaactccatcggcc
gctgtcctgatcgattccatcacggtcgtgccgcgcgcaggttcaatcccgttcttggga
ggatcaccggccgccgactaccgtcgccaagagttcgaccactaccgttgcgcccagtac
ttttattccgtcgtcaagaccaacatccctgaagtctgcaagaaacatctctacagtatc
ggcttctacgtccttggatcaggtttcgagtgccagtgcgatcccactggatcctcaagc
agcatctgcgattcgctaggtggtcagtgctcgtgcaaacccaacgtcgttggccgtcgt
tgcgaccagtgcgctcctggcacctttggattcgggccagaaggttgctcgccatgcgag
tgcaaccctgttggctcgctcgacaacttttgcgatagcggaactggacagtgtcgctgc
cgacccaatacttacggccgagtttgtgaccagtgccaaccaggatattggaacttccct
tcgtgccaacgttgcgaatgtaacggacatgccgacctttgcgattcacgaacaggccga
tgccttgactgtcgcgattttacgaccgacgaccattgcgaccgctgcttggacagttat
tacggagacccccgtttgggtgtcgacattccttgccgtgcctgcccttgcccaggaacc
atcgattcgggacattcttacgctcctcgctgctcgctggaccgcgaaacccaagacgtg
atttgcgaatgccaggaaggctacgccggaccccgctgtgacgtctgcgctgacaactat
tttgggaatccagaagtccttggtggccagtgccgaccttgccaatgtagcaacaacatt
gatctttctcgaccgggcaactgcgctggtaaatcgggtgaatgtcttcagtgtctgttc
aacactgaaggcttcagctgtgaagtctgccagaaaggcttcttcggcgatgccctctcc
cagcaatgtacgccttgcgtttgtaacctcctgggcagcgattcctctttagaagggcca
tccgtctgtaaccgacagaccggacagtgcccgtgcttgcccaacgtggagggtctgtca
tgcgatcgctgcgcagttgaccactggaaaatcgcttcaggcgaaggttgcgaggcttgc
agttgtgatccagtcggctcactctcgacccaatgtaacgaattcgacggccaatgcgaa
tgccgcgaaggtttcggtggacgaaaatgcgatcagtgtcgcgccaactactggggtaat
ccgtccgacaactcttgtcggccgtgtctctgcgacccactgggatcagccacccaacag
tgccatcacgcaacgggcgcctgcgtctgcttgcccggcatgggcggcgagaaatgtgat
cgatgcgctcgcggatacgtcggcgccatcgttcccgactgccagccatgcggcgaatgt
ttcgacaactgggatcgcattcttcaggaattgcgcggacaaaccgaacaagtggtagtg
gctgccggacaaatccgcgagacgggagcaactggagcttacacccgagaattcgaaacg
atggaaaataagttgagcgacgtgagagctctgcttctcaatactactctcagcggccac
gagttatcccaactagaagaacttttcagctccatcaaaacgaatttgacaatggccggt
caaggaatggacggattggatgccactgtagaaaacaccacccaacgtgtcttctccgtg
gttttggcactttccaacctgagatccaaagccaccgatctgcaaactgccgcccagtca
ctcaagaacaacgccaccaaattgcaggaagccaacgtcgaaggagctttgaacttgaca
cgtgaagctcgtcaacgatcccagaaagctcaagatcgggttgaattcactcaacaacca
gtcagcgactcggaaaggcaacgcaggaggacggaagcattgctgtcacgtgtcgctcca
cagctgggcgagagtcagcaaagaaacgcggccgatctggccgatcttggtggtcggctc
gccgttattgaacgatccctacccgagttgaacgacgtcgtctgtgacggacgcggtgat
ccttgcgacagtttgtgcggtggcggtggatgcggaaaatgtggagctctgtcatgcgac
gaaggatccgttaccaaagccgaaaatgcgctcagtttggccaaggaggcggaaggaatt
ctacgcaatcggcagtccgaatcggaagagatgatgcgcggcgtacgtcaggctgaagtg
gaagcggaggctgcccgggtgatggcccgtgaggctcttttagccgccgaattggcccaa
aatcgttcagaagcagccaaagctgaagtcgacgagctgatgaatcaaattgacgaatac
ctcgagcagtctggcgcaagtccggccgacattcgttcactggctaccgatgttttgtct
aagggcatttcattgcaacccgaacagattactgacctagcccgtcgaatcaacgaaacc
atctcatctctgaccaacattgacgccattctggccgagacgtctggagatttggcttcg
gctaaggccctcaaagatcgtgccgatgcagccaaagctcacgctcagggcattctgact
gttgcccagcaggttcttgactctctggctgccgccaaggctgctcaggacaaggccgaa
gaagctattcaaacagcagataaggatatcagtgcggccgaactccatctgacgcagatt
gccagcgagactgccgatgctcaagcgaaagccagtgaatcagtccaggaggtggaagga
ctacgggagaggcttaaggaacttcagcgcaagctgatcaaaaacgagcgagacgtgaaa
gaggcggctcgtgaatccgatgtggctgcgtcgttagcctcgcgcgctggacaaggcgca
tccgagctggacacggcttatcagcgagcattgaaagctttggaagagaagacggcaaga
agtggtgatgcccgagagcgctctgcccgtctccaagataaggccaatcggctgtcggct
agcgtgtttgccaaagttcaagagctcaaagaaatggaagatgaatatttactgcatgag
cgccggctgaccgacctgtctgatcaagtgatggcaatgaatgtgcgcatgaccgactac
ttgcaggttattagcgatcgctccgaattctaccgcacctgtcaaaagtag
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integrated database retrieval system