Daphnia pulex (common water flea): DAPPUDRAFT_302036
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Entry
DAPPUDRAFT_302036 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_302036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_302036
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAPPUDRAFT_302036
Spliceosome [BR:
dpx03041
]
Complex A
U2 snRNP components
U2 related factors
DAPPUDRAFT_302036
Complex B
DAPPUDRAFT_302036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
AhpC-TSA_2
Motif
Other DBs
NCBI-ProteinID:
EFX67324
JGI:
Dappu1_302036
UniProt:
E9HLP9
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MQDIQSEVRKVQKLDVQKSKGSGVMVMTGVAKKAAKKKGELVEQNQDALEYSSEEESEDL
ASAMSGLANSNIKQKEKVFKIDHNKINYFPFRKNFYVEVPDIARMTQEEVDEYRQELEGI
KVKGKGCPRPIKAWAQCGVSKKEMEILKKLAYEKPTPIQTQTIPAIMSGRDIIGIAKTGS
GKTLAFLLPMFRHILDQPALEETDGPIAIIMSPTRELCLQIGKECKRFTKSLNLRVVTVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYIVLDEADRMFDMGFE
PQVMRIIDNTRPDRQTVMFSATFPRQMEALARRILNKPVEITVGGRSVVCADVEQHVLVM
EDEQKFLKLLELLGVYQEQGSVLVFVEKQESADDLLKDLMKAGYDCISLHGGIDQYDRDS
AVVDFKNGKIKLMIATSVAARGLDVKHLILVVNYDCPNHHEDYIHRCGRTGRAGNKGFAY
TFITPDQQRAAGDIIKAMEQSETPVPVELQTLWDQYKSKLAAEGKTVRSGGGGFSGKGFK
FDESEAMAVSEKKKFQKAALGLQDSDEEDIENDLDEQIETLMAAKRIVREVQASTLVSGG
GGSVAASIPSKTATDKLELAKRLASRINLAKQSTGPVPAIPETSIGAISARNVAEQLAAK
LNTRLNYAPVESEEPMEGSVEEGGENTPSSSDVIQKFEEELEINDFPQPVRWKITSREAL
AQVSEFSEAGVFVRGTYCAPGKKIADEERKLYLAIESTSEMAVSKARKEIVRILKEEMLR
LASSTSYQGSKTGRYKV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacattcaaagtgaagttcgaaaggttcagaaacttgacgttcaaaaatcaaaa
ggatctggcgtgatggtaatgaccggagtagcaaagaaagctgctaaaaagaaaggtgag
cttgtagaacaaaatcaggacgctttggaatattcctcagaagaagagtcggaagacttg
gcatcagcaatgtccggactggcgaatagcaacataaaacagaaagaaaaggtttttaaa
attgatcacaacaaaatcaactattttcctttccggaagaacttttacgtggaagtaccc
gacatagcacgtatgacccaagaagaagtagatgaataccgacaggaacttgaaggcatt
aaagttaaaggaaaagggtgtccgagacctataaaagcatgggcacaatgtggtgttagt
aaaaaggaaatggaaattctaaaaaaattagcatatgaaaaaccaacccccattcaaacg
cagacaatccctgcaatcatgtctggcagggacataataggtattgccaaaactggcagt
ggcaaaacactggcatttttgctgcctatgtttaggcatattttagaccagcctgcatta
gaagagactgatgggccaatcgctatcataatgtctcctacccgagaattgtgcttacaa
atcggcaaagaatgtaaaagattcaccaagtcattgaatttgcgtgtggtgacggtctac
ggaggaacgggaatatcagagcaaatagctgaactaaaacgtggcgctgaaattattgtg
tgcacacccggaagaatgattgatatgttagctgccaacaacggacgtgtcaccaatttg
cggcgtgtgacttacatagttttggatgaagctgatcgcatgttcgacatgggtttcgag
ccacaagtaatgcgaatcattgataacactcgccctgatcgacaaactgttatgtttagt
gctacatttccccgtcaaatggaggccttggctcgtagaatcctaaacaaacctgttgaa
atcacggttggaggtcgtagcgttgtttgtgctgacgtcgaacagcatgttcttgttatg
gaagacgaacaaaaatttttgaaacttttagagttgttgggggtttatcaggaacaaggg
agtgttcttgtatttgttgagaaacaagaaagtgctgatgacctgctcaaagatttgatg
aaagctggatacgattgcatttcccttcatggtggtattgatcagtacgatcgtgattca
gctgtagttgacttcaaaaatggaaaaatcaaattgatgattgccacatctgttgccgct
cgtggtttagatgtgaagcaccttattttggtcgtcaactacgattgccccaaccaccat
gaagactacattcatagatgtggacgcaccggaagagcaggcaataaaggatttgcctac
acttttattactccagatcagcaaagggctgcaggggatattattaaagcaatggaacaa
tctgaaacgccagtgccagttgaattacaaactctttgggaccaatacaaatccaagctt
gctgcggaagggaaaactgtccgttcaggaggtggtggattttctggtaaagggttcaaa
tttgatgaatctgaagctatggctgtgtcagaaaagaaaaaattccagaaagccgctttg
ggtctgcaagattcagatgaagaagatatagaaaatgatttggatgaacaaatcgaaact
ttaatggctgcaaaacgtatagtgcgtgaagttcaagcttcaacactggtctctgggggt
ggcggttctgttgccgcgagcattccaagcaaaacggctaccgacaagctggaattggcc
aaacggttagcttcaaggattaatcttgccaagcaatctactggtcccgttccagccatt
cccgaaacatccataggagcaatttcggctagaaatgttgcagagcagttggcggcaaaa
ctcaatacacgactcaattatgcccctgttgaaagtgaagaacctatggaaggatcagta
gaagaaggcggagaaaatactccatctagctcggacgtcattcagaagttcgaggaagag
ttagaaattaacgacttcccacaacctgttcgctggaaaatcacgtctagggaggctttg
gcccaggtaagcgaattttcagaagctggcgtttttgtccgaggaacatattgcgcaccg
ggaaagaagatcgctgacgaagagagaaaattatatttagccatcgagagcacgagtgaa
atggcagtttcaaaagcacgaaaagaaattgtccgtattctaaaggaagaaatgcttcga
ttggccagttcaacctcctatcaaggttctaaaactggtagatacaaagtttga
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integrated database retrieval system
