Daphnia pulicaria: 124328241
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Entry
124328241 CDS
T08670
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpz01002
]
124328241
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124328241
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124328241
Peptidases and inhibitors [BR:
dpz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124328241
Ubiquitin system [BR:
dpz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124328241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
DUF1002
Motif
Other DBs
NCBI-GeneID:
124328241
NCBI-ProteinID:
XP_046642902
EnsemblRapid:
LOC124328241
LinkDB
All DBs
Position
3:complement(10938561..10944514)
Genome browser
AA seq
1397 aa
AA seq
DB search
MVCKMVPGDNTPAVNDSANMILSSNLSAGSHSGQEGEIRMALIVVQDMTTATLQVGHVSL
SLASTVLVRMLVQQVATSANYVNGTFLLHLQPANPDSSAVLLNERLDETLESVGFVCDDG
HTRNNLIIADAGSEPPKRDSPVKPELGTLCSKRITAVPDTKSSNTVYSKRITDSSPDGDR
TPSDKICEMNPRRGFVGLVNQAMTCYLNSLIQTLYMTPEFRNAMYRWHFDGTEDEQAKSI
PFQLQSLFLMLQTTDKSSIGTTNLTRSFGWDSSEAWQQHDIQELCRVMFDALEHKFKNTE
QSDLISRLYEGKMMDYVRCLECRTEKAREDTFLDIPLPVRPFGSQTAYASIEEALKAFVA
PETLDGNNQYWCEKCGKKCDAHKGLKFSRFPYLLTLHLKRFDFDYTTLHRIKLNDKVTFP
EQLHLDSLLVDDRNSDPNSSNKDSQDTAIEDSMSEASGSSRANSSNGIESQDDDEGIDVR
AENCTSSTSNASGASGSDHNRKNRGQGQYSYELFSIMIHSGSASGGHYYAYIKDFLTCEW
HCFNDQTVSNITIDDIRKTYGGGPSRSAGYFTSAYTSSTNAYMLMYRRIDKERNANFMSP
SEFPDHLQQLLRRMQEEEESQRAVEEQERNTCRIQLYCHHPKRGRVDLPFKLHKEVTLRQ
AVSMAYEQIGDLSDIGVPLSRCRLVKYNEVYDSVECSWDHRMDETVNDIFDGVKSSYKFD
LLLEIIPEGQTFQVYAPGSLNAKIFMVDVDARELHLPVSIRMPFSSSVQDLKLSMKSTMN
IAEDPDHIHLVTIRYSNELHRLTQKDRSLRSEGFQRAEKVYATVFASSDENEFLSLCKPR
LYDLIDQYENALTVRMTLPKADKETLERLGIDIAIPTIPTLSATAAATARTTSPMESYSP
EDAASDDSLSHLERERALSEGEEEEEENRRRRLGDIEDFAAISATFQECYSEGEELPQRL
PNSTSSASASEDSSLSLTDSDRTLLGDPPLAEETDCDVEMGLATRRRNALVQVEPESIDT
IPELETVKFFFKVMSISEDADEKCCTAMVDKRIPLANFKSELEVLLNVPAEFLLVYKKTP
TTASTFGTTEREWAQQNETLETLGDDPQISVRLGRALRPGEVRGKIFQLKINDTQERTQL
LFEWVLSTGVQIGKMKRDILAEMKSRHGIEIPPEKCILRKKHWRTPSTVYGDEEEVLDTE
LLYIFKNWEMFLQLLDVNNPLELSSNYRGAETVIFTRRWRPSTFTLEPFVDTPLAEFNRI
VLGRKLSEVSGLKPEQIEIAKAPGTFPCEGSLLGIHDDITWVPLLTTGSDDDGSFKYPCS
VQTDGDVVYWREKGEPLKKLTEQERREILSRENTDSTASGTSYSTVSASPRKERPLRIFI
DSPKSSSVKETIEPDLD
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcaaaatggtgccaggcgataacactcctgctgtcaacgactcggccaacatg
attcttagtagtaatctaagtgcgggttcccatagtggtcaagaaggagagattcgaatg
gctttgatagttgtccaggatatgacgacggccactctacaagttggtcatgtaagcctt
tcattggcttctactgtgctagtcagaatgctagtgcagcaggtcgccacctcggccaat
tacgtgaacggcacgttcctgttgcatctacagcctgccaatcccgactccagtgctgtg
ctcttaaacgaacgtcttgacgaaaccctcgagtctgtcggttttgtgtgtgacgacggc
cacactagaaacaaccttataatcgccgatgcaggttctgagccccctaaaagggactca
cccgtcaaaccagaattggggacactctgttcaaaacgaatcacagcagtaccagacaca
aaatcgtcaaatacagtttattctaaacgaatcacagatagttctccagacggtgataga
acaccgtcggataagatttgcgaaatgaatcctcgaagaggattcgtaggattggtgaat
caagcgatgacgtgttatctcaatagtttaattcagacgttgtatatgacaccagagttt
cgcaatgcaatgtaccgttggcatttcgacggtacggaagacgagcaagccaaatcaatc
ccttttcagttgcaaagcctctttcttatgcttcaaacgacggacaaatcatcgattggg
actacaaatttgactcgtagtttcggttgggactccagtgaagcttggcaacaacatgac
attcaggagctctgtcgagtcatgtttgatgcactcgagcacaaattcaaaaatacagag
caatcagacttaatctcccgactgtatgaagggaaaatgatggactatgttcgttgctta
gaatgccgaacggaaaaagctcgcgaagacactttcctcgatatccctctcccagttcgt
ccttttgggtctcaaacggcatatgcctcaattgaagaggccctgaaggcattcgtcgca
ccggaaacactggacggcaataaccagtattggtgcgaaaaatgtgggaaaaagtgtgac
gcccacaagggtctcaagttttcccgttttccgtacttgctgactttacatctcaagcga
tttgactttgattatacgactttacatcgtatcaaattaaatgacaaagtcaccttccca
gaacagctccacttagattcgctgctcgtcgacgaccgaaatagtgatccaaactcttca
aacaaagattcgcaagataccgcgattgaagattccatgtctgaagctagcgggtcgtca
cgcgccaattcgagtaacggaatcgaatctcaggatgatgacgaaggcattgatgtaagg
gcagaaaattgtacttcaagtacgtctaatgcgtcaggtgctagtggtagcgatcataat
cgcaaaaaccgcggacaaggtcaatacagctacgagttattttccatcatgatccattct
ggtagtgcttccggtggccactattacgcttatattaaagattttctcacatgtgaatgg
cactgtttcaacgaccagactgtatcgaatattaccattgatgatattcggaagacgtat
ggaggtggcccttcccgaagcgccggatactttaccagtgcctatacttcaagtaccaac
gcctacatgcttatgtacagacggattgataaagaacgtaatgcaaatttcatgtctccg
agtgaatttcccgatcaccttcagcaattactgcgacgtatgcaagaagaagaagagagc
cagcgagctgtagaagagcaagaaaggaatacgtgccgcatccagttgtactgtcatcat
ccaaaacgcggtcgcgttgatttacctttcaaacttcacaaagaagtgactctacgtcag
gccgtttcaatggcatatgagcaaattggcgatctatccgatattggtgtgccactcagc
cggtgtcggctagtcaagtataacgaggtttacgacagtgtagaatgtagctgggatcac
cgaatggacgaaactgtcaatgatatatttgacggtgtcaaatcttcctacaagtttgac
ttgctcttggaaattattcctgaaggccaaactttccaagtttatgctcccggcagtctg
aatgccaagatttttatggtggatgtggatgcaagagagcttcacttacctgtgtccatt
cgtatgcctttcagtagctctgtccaagatctgaagctcagcatgaaatctacgatgaac
attgccgaggatccagatcatatccacctggtcaccatacgttactcaaatgagctacat
agattgacccaaaaagaccgtagtttaaggagcgaaggcttccagagggcagaaaaagtc
tacgccaccgtgtttgcctccagtgatgaaaacgaattcctatcgttgtgcaaaccacgc
ctgtatgatctgattgaccaatatgaaaatgccctaactgtacgcatgacactacccaaa
gccgataaagaaacgttggaacgtcttggtatcgatattgccattcccacaatcccgacc
ctttcggcaactgctgctgccactgccagaacaacttctccgatggagtcgtacagtccc
gaagatgcagcctcggacgactccctatcccatttagaacgcgaacgagccttgtcggaa
ggcgaagaagaagaagaagaaaatcgccgccgtcgccttggagacattgaagactttgct
gccatttctgcgacttttcaagaatgctattcagaaggagaagagcttcctcagagactt
cctaattctacctcgtctgcctcagccagtgaggacagtagtttgagcttgacggacagt
gatcgtacactcttgggtgatccgcctttagctgaagaaaccgactgcgatgttgaaatg
ggtctagccactcgcagaagaaatgctttggttcaagtcgagccggaatctatcgataca
ataccggaactggagaccgtgaaatttttttttaaggtgatgtcaatcagtgaagatgcg
gatgaaaaatgctgcacggccatggtcgacaagcggatcccgttggcaaatttcaaatca
gaactagaggtgcttctaaatgttcctgcagagtttcttttagtttataaaaaaacccca
acaacggcgtctacctttggaacaacggaaagggagtgggctcaacaaaatgaaaccctt
gaaacccttggagacgacccacaaatatctgttcgccttggtcgagccctgagaccgggt
gaagtgcgtggcaaaatttttcagctgaaaatcaatgacacccaagaacgtacacagtta
ctgtttgaatgggtgctttcaactggtgttcaaatcggtaaaatgaaacgagacattttg
gccgaaatgaagagtcgtcatggcattgaaatccctcctgaaaaatgtatcttgcgcaag
aaacactggcgtacaccgtctaccgtctatggagacgaagaagaagtattggacacggaa
ttactctacattttcaaaaattgggaaatgtttttacaattgttggatgttaacaacccc
ctcgaactttcgtcaaattatcgaggagctgaaacggtcattttcactcgtcggtggcga
ccgagcacatttacactggagccttttgtcgacacgcctcttgccgaatttaatcgtatt
gtgctaggccgcaaattgtcagaggtgagtggtttgaaacctgaacagatcgagatagcc
aaggcacccggaacttttccttgcgagggctcccttcttggaatccacgatgatattaca
tgggtccccttgctgacgaccggttcggatgacgacggctccttcaaatacccttgcagc
gtgcagacggacggtgatgtagtctattggcgcgagaaaggcgagccgctcaagaagcta
acggaacaggaacgtagagagattcttagccgagagaacactgattcaaccgcttccgga
acttcctattcaaccgtttccgcttcacctcgcaaagaacgcccgctcagaatctttata
gactcgcccaaatctagcagcgtgaaagaaacgattgaaccagatttggattga
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integrated database retrieval system
