Daphnia pulicaria: 124331356
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Entry
124331356 CDS
T08670
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
dpz
Daphnia pulicaria
Pathway
dpz04150
mTOR signaling pathway
dpz04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124331356
04150 mTOR signaling pathway
124331356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124331356
Membrane trafficking [BR:
dpz04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124331356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
SGL
Ldl_recept_a
DUF5050
cEGF
EGF
TM_ErbB1
Las1
Motif
Other DBs
NCBI-GeneID:
124331356
NCBI-ProteinID:
XP_046644751
EnsemblRapid:
LOC124331356
LinkDB
All DBs
Position
1:12982160..12988480
Genome browser
AA seq
1754 aa
AA seq
DB search
MRLLVQLLAVFLVTVQQGASAHPWLLFANRKDIRLVDATQTRNRNNNVTIIIKDLEDAAA
LDYHYEKGMVCWTDISLEMIRCAYHQGANLLNKTNVITTGLVSPDGLAIDWLGNKLYWTD
SETNRLEVSTLNGENRKVLFWEDLDQPRAICLFPKKGLLFWTDWGENPKIESAGMNGDLT
TRHVIIKDEIFWPNGLTIDYEEEAIFWADAKLNIICSASLTGANRRTVSQGDLQHPFALT
MYKNVLYWTDWQTKSIHSCNKKTGAGRKAVLGSSLTPMDIHVYDQERQPYSALPCQNQNA
KCSHLCLSAPYPPWFTCACPTGSKLVDNFTCADGAQQLLLLARRTDLRRISLDTPDYTDV
VLPLDGVKHAIAVDYDPVDGFVYWSDDEVRGIRRAKLDGSQQEDVVMAEVDHPDGIAVDW
IGRNLYWTDTGTDRIEVARLNGTWRKVLISENLDEPRALALDPEVGWMFWTDWGKEPKIE
RASMDGSDRVVLVNTSLGWPNGIALDYVQRRLYWCDAKTDKIEVADMDGSKRKEILSENV
PHIFGFSLLGDFLYWTDWQHRSIERVHKWTGEDRKIIVDQLPDLMGLKAINITEVRGTNA
CAVGNGGCSHLCLNRPGKYVCACPIGYELTADEINCVIPEAFLLFTRKEDIRRISLEANH
KNVIIPIAGVKEASALDFDVNDNRIYWTDIGVKSISRAFMNGSNLEVVVEFGLEYPEGMA
VDWVAHNIYWADMGSHRVEVARLDGSSRRVLIWKDLKNPRSIALDPGEGYMYLGVWGSVP
HIERAGLDGSQRITLVNGVGRVNGLVVDFADRRLYWADVDGKHIESCDLDGKQRQVVVSG
NMPQPHGLTQYEEFIYWADWTTRSIERAHKQSGENRTRIQTQVDYVMDILVFHSSRQSGW
NPCAVNNGGCSHLCLALPAGSTSSSSPRTQPSVSSTTTAASSSSASTSSAAAATNLPATT
VVVRQSHTHRCTCPTHYELVADNKTCVAPKSFLLFSQKNYINRLLPSSPDSPDVILPIRG
LKQVRGIEFDPVGQHLYWIDGRSQTIRRALDNGTQASVVVANPTQSLHPYDLAVEPYSRV
LFWSCSRFNAINATRIDNHLSVGILVGGPSTSDKPRNLAVHPVKGWLFFTNLVSPARIER
CRLDGSDRVKIIETDIDQPSALTIDTEEEMIFWADTSLKVIEVAALDGTNRRKLISSQLV
QPIALTVHGRHLYWLEKDSQLIERALKINGEDRQRVQGRIPYLSDLLSTSTLDPNTLASN
PCYPPNSGCGHLCVLMDSGERGRCACPLNMILEDGKTCVEPPACSPEHFTCRSGIYETGP
SGSGATRCIPLSWRCDGQTECSDASDEEDCPECRPDQFRCQTGQCIAKKHECDGVPQCMD
RSDEQRCCPLGQFYCSELCLPDILLCDGVPHCPDESDESVTSCANRVANPLAGDSSIRTT
YIIGIVVGLGSVALLCVLFFCWHRRHSHADPDEGAHDPLNPVAPRHTIVPGHTQLQTDYQ
LQYVSNIVGERTAGVGASSHLGSSAVDLLSGRGVKNGGAIIVDGGGVVVGSSSSCQLYDR
SHVTGASSSSSSGPGYPQETLNPPPSPATDTRSHCTEPYCCTAVSGQSHKSHTLSRQTAR
GHHLGHQPRLSGTSSQVYSTLRSYKHYKVRNQPPPPTPCSTDNFEESDSQVAYHSSPSPS
SIPKMGPGFKNAGRRQQSSHRHQRLGADYDSDPYPPPPTPARSHYVSDASCPPSPSTERS
YFNPLPPPPSPSPQ
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgttggtgcagctcttggcggttttccttgtaaccgtccaacaaggtgcctct
gctcatccttggcttttattcgccaatcgcaaagatattcgtttggtggacgccactcag
acaaggaatcgaaacaacaatgtcaccatcatcattaaggatctcgaggatgctgctgcc
cttgattatcattatgagaaggggatggtctgctggacagacattagccttgagatgatt
cgatgtgcctaccatcagggagccaatttacttaataaaacaaatgttatcactacaggt
ttggtgtccccagatgggctggcgatagattggttggggaacaagttgtattggacagat
agtgaaaccaatcgccttgaagtttcaacactgaatggagaaaacagaaaagttcttttt
tgggaggacttggatcagccaagagccatctgcttgtttccgaagaaaggcttgctgttc
tggaccgattggggagagaatcccaaaattgaatctgctggcatgaatggtgatcttaca
acaagacatgtcattatcaaggatgaaatattttggcccaatggactgactattgattat
gaagaagaggccatattttgggccgacgccaagttgaatatcatctgttcagccagtcta
actggtgcgaataggaggacagtaagtcagggagatttacaacatccatttgctttgacc
atgtacaaaaatgtgctgtactggaccgattggcagaccaaatccattcattcatgcaat
aagaaaacgggagctggtaggaaagctgttcttggctcttctcttactcctatggacatt
cacgtgtacgaccaagagaggcaaccctacagcgccttaccgtgtcagaatcagaatgcc
aagtgttctcatctttgtctctcagctccttatcctccatggttcacctgtgcatgcccc
acagggtcaaaattagtcgacaattttacgtgcgctgatggtgctcaacagttgttgctg
ttggcaaggcgtactgatctgaggcgcatctcactcgacactcctgattacacagacgtc
gttctacctttggatggcgtcaagcacgccatcgcagtcgactacgatcccgtagatgga
tttgtctactggtcagatgacgaagttcgaggcatccgtcgtgcaaaacttgatggcagt
caacaggaggatgttgttatggctgaagttgaccacccggacggaattgctgttgactgg
atcggccgtaacctttattggacagatactgggacggatagaattgaagttgctcgactc
aatggcacctggcgtaaggtgctcatatcagaaaatttggatgaaccccgtgccctggcc
ttagatcctgaagttggctggatgttttggactgattggggtaaagagccgaaaattgaa
cgagcttccatggatggctcggatcgcgtagtccttgtaaatacttccttgggctggccc
aacggtatcgctctcgattacgttcagcgtcgcctctactggtgtgatgcaaaaacggac
aaaattgaagtggctgacatggacggctccaaacgcaaagaaatactcagcgaaaatgtg
ccccacattttcggtttctccttgctcggcgattttctctactggacagactggcaacat
cgtagtattgagagagtgcataagtggacgggcgaggatcgcaaaatcattgtagatcag
ctcccagatctaatgggactcaaagcaatcaacatcacagaggttcgagggacaaatgct
tgtgctgttggaaatggtggatgttcccacttgtgcctgaaccgaccaggcaaatatgtt
tgtgcctgtcccatcggttacgaactgacggctgatgagattaactgtgtgattccggaa
gctttcttgctcttcactcgtaaagaagacattcgccgcatcagtttagaagcgaaccac
aaaaacgtcatcattccgattgctggtgtcaaggaagctagtgccttagatttcgacgtc
aacgacaatcgcatttactggacagatattggagtcaagtccatttcgcgagcctttatg
aacggatcaaatctggaagtagtggttgaatttggtttggagtatccagaaggcatggct
gtcgactgggtggcccacaatatctattgggcagacatgggaagccatcgtgtggaagtg
gcccgacttgacggatcttcacggcgtgttttgatttggaaagatttgaaaaatccacgc
agcatcgccctggacccaggagaaggatacatgtacctcggtgtctggggttctgtccca
cacattgaacgcgctggactagatgggagccaacgcatcactttggtcaatggtgtaggt
cgcgtcaacgggctggtggtagactttgccgacagacgcctctactgggccgatgttgac
ggcaagcacattgagagctgtgacctagacggcaaacaacgacaagttgtggtctcgggt
aatatgcctcagccgcacggcctgacgcagtatgaggagtttatttactgggctgactgg
acaacacgctcgatcgagagagcccacaagcaatcgggtgaaaatagaacacgtatccaa
actcaggtagattacgttatggatattctcgtcttccattcgtcgcgacagtccggctgg
aacccctgtgctgtcaataacggagggtgttctcacctgtgccttgctctaccagctgga
tctacaagtagttcctcacctcgtactcagccatcagtttcttctacaactaccgctgca
tcttcttcatcagcatcgacgtcgtctgctgctgcagcgacaaatctaccagcaactaca
gtagtcgtccgtcaatcgcatactcatcgatgtacctgtcccacccattacgagcttgtg
gcagacaacaaaacatgtgtcgccccgaaatcatttcttctcttcagccaaaagaattac
atcaaccgacttcttccgagttcccctgatagcccggatgtgattctgcctattcgaggc
ttgaaacaagttcgtggtattgagtttgacccggttggacagcacttatactggatagac
ggacgttcacaaaccattcgtcgcgcgctagataatgggacccaagcttcagttgttgtg
gccaatccaacacagtcactacatccatacgatttggcagtggaaccttattcacgagta
ctcttttggagttgctcaaggttcaatgccatcaacgctaccagaatcgataatcacctt
tctgttggtatcctggttggaggtccgtccaccagcgacaaaccaaggaacttggccgtt
caccctgtcaaaggatggctgttcttcaccaacttagtctcgccggcccgaatcgaacgg
tgccgtttagacggtagtgaccgcgtcaagataatagaaacagatattgaccaaccttca
gcgctgactatcgacacagaagaggagatgatcttttgggctgacaccagtttgaaggtc
atcgaagttgcagctctagacggaaccaatcgcaggaagttgatctcttctcaattagtt
cagcctattgcattaactgttcacggacggcacctttattggttagaaaaggattcacaa
ctcatcgaacgagcactcaagattaacggtgaagacagacaaagagtccagggtcggatt
ccatatttgtcggatttactttcaacgtctacactggatccaaatactctagcatccaat
ccgtgttatccacccaactcaggctgtggtcatctttgcgtcttgatggattccggcgaa
cgtggcagatgtgcttgtccattaaacatgatactcgaagatggcaaaacgtgtgtagaa
ccacctgcttgttctccagaacattttacctgtcgttccggaatttacgaaacgggaccg
tctggaagcggggccactcgctgcattcccctgtcgtggcgttgtgatggccagacggaa
tgttcagatgcttcggatgaagaagattgcccagaatgtcggccagatcagttccggtgc
cagaccggccagtgcatcgctaagaaacatgaatgtgatggcgtccctcaatgcatggat
cgatcagatgaacaaaggtgttgtccccttgggcaattttactgttcagaactttgtctt
cccgatattcttctttgcgatggtgtgcctcattgcccggatgaatccgacgaatcagtt
acttcctgcgcaaaccgtgtggctaatccattagccggcgattcgtccattaggactact
tacatcatcggcattgtggttggattgggatcggttgcgcttctttgtgttctctttttc
tgttggcatagaagacacagccacgctgaccctgacgaaggagcccacgatcctctcaat
ccagttgcgccccgacacactattgtacccggccacactcagctgcaaacagactatcaa
cttcaatatgtcagtaatattgttggtgagaggacggcaggtgtaggagcatcctctcac
ctcggcagcagcgcggtggacctcttgagcggccgtggagtgaaaaatgggggagccatt
attgtggatggaggtggcgtcgtggttggttcaagttccagctgccaattgtacgaccgc
agtcatgttactggtgcatcgagttcgagttcgagcggtcctggatatcctcaggagact
ctaaatccaccgcccagcccggcaacagatacacgatctcactgcacggaaccatactgc
tgtacagctgtgagtggtcaatctcacaagtcgcacacattgagccgtcagactgctcgt
gggcaccatctgggacatcaacccaggctaagtggtacttcgagccaagtttattctact
ttacgatcttataagcattacaaagtccgcaaccaacctccaccacccacaccctgcagt
accgacaacttcgaagaatcggattcgcaagtggcttatcacagttcaccttcgccttcg
tctatacctaagatgggcccaggattcaaaaatgctggtagaaggcaacagtcttcacat
cgacaccaacgattgggagcggactacgacagtgatccttaccctccaccacctactcca
gcaagatcacattacgtgtcagatgcatcatgtccgccatccccttcgacagaacgatca
tattttaatcctttaccccctccaccttctccatcacctcagtag
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integrated database retrieval system
