Daphnia pulicaria: 124338472
Help
Entry
124338472 CDS
T08670
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124338472
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124338472
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Helicases
124338472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Membralin
Motif
Other DBs
NCBI-GeneID:
124338472
NCBI-ProteinID:
XP_046648512
EnsemblRapid:
LOC124338472
LinkDB
All DBs
Position
4:complement(9977028..9980422)
Genome browser
AA seq
825 aa
AA seq
DB search
MPELQGFGDGGYQSEAELDTRALVQEQNRKKKKSGGFQSMGLSYNVYHGIMKCGYKIPTP
IQRKCIPLIMEKKDVVAMARTGSGKTACFLIPLFERLQAHSTIGTRALIMSPTRELALQT
LKFTRELGKFTGLKAATILGGDSMEAQFAAMHEIPDIIIATPGRFAHLCVEMELKLKEIE
YVVFDEADRLFEMGFGEQLLEILNRLPELRQTLLFSATLPKLLVDFTKAGLTDPVLVRLD
VDSKLPEALKLGFVFCPCESKASVLLHLLRNAVKSGELTLVFAATMHHVEYLHLLLDKAG
ISNTYIYSSLDQAARKIHAAKFQTKQTHVMITTDVAARGIDIPLLDNVINYNFPAKAKLF
VHRVGRVARAGRSGCAYSLVALDELPALVDLHLFLGRPVKQIPQDGLGKDVDWDGFLGRV
GQTVIDDGSSAMTLWHQESVELQNMIKVYTSAYKQYKRSCPPPSHESVKKAKEIKLELLG
PHPVFVAESSELEGDRLNLLEQMKSYRPHHTIFEIGVTANSVKAKVMLEKRIKHQRIIIK
QKNANMKQSETKPSDEPESSGVPQEEANEELVQEAFSTVIAQKKRTSRKPFDPNQSKKRR
LQSQTTKDEENYINYNSKDHQTESGLALGCDFGRAAADAVLDLTGDDDQELRKQRSLLKW
DRKKKKFIGEDDTKKRKIRTESGVWIPATYKTDRYERWKDKSKVDQNDPASEDSGDDEKV
GNRNAPARFDGGYQRRGIPMGMNLEGRLGSLPKNHPAMVKAWAEVKQGGQRVRDEVKRPE
QIEKARKLKEKARLRGNKEIRIKLQMKQKKPTLKTKQKKGGKRRR
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcaagggtttggagatggaggatatcaatcagaagctgagcttgataca
cgagctctggttcaagaacagaatcgtaaaaagaaaaaatcaggtggtttccagtcgatg
ggccttagttacaatgtttaccatggaataatgaaatgtggttataaaataccaacacca
attcaaagaaaatgtattcctttaatcatggaaaaaaaagatgtcgtagccatggccaga
actggcagtggcaaaactgcctgcttcttaattcctttatttgaaaggctccaagcacac
tccaccataggaactcgtgcacttattatgtcccctacaagagaattggcattacagact
ttgaaatttactcgagagcttggtaaattcacagggctgaaagcagctaccattcttgga
ggagattctatggaagctcaatttgcggcaatgcatgaaataccggatatcattattgca
acacctggacgatttgcccatctttgtgttgaaatggaattaaaactcaaggaaattgaa
tatgtggtttttgatgaagccgacagactttttgagatgggatttggggagcagctgttg
gagattttgaatcgactaccggaattgaggcagactctccttttctccgctactcttcca
aaactgctcgttgatttcaccaaagctggactaactgaccctgtccttgtcagattggat
gttgattcaaaattacctgaagcactgaaattgggttttgtattttgtccgtgtgaatcg
aaagcgtctgttcttcttcatttactacgcaatgcagtcaagtcgggggaactgacactt
gtgtttgcagcgaccatgcatcacgtggaatatttgcacttgttgcttgacaaagctggc
atctctaatacctacatttactccagtttggatcaagctgcgcgtaaaatccatgcagcc
aaatttcaaacaaagcaaacacatgttatgatcactacggacgttgcggcccgtggtatt
gatatcccacttctggataacgttatcaattataatttcccggctaaagcaaaacttttt
gttcacagagtcggacgtgttgcccgtgctggacgttctggttgcgcttattccctggtt
gctcttgatgaactaccagctttagtagatctgcatctcttcctgggacggccggttaaa
cagattccgcaagatggactcgggaaggatgtcgactgggacggctttcttggtcgcgtc
ggccagactgtaatagacgatggaagtagtgccatgacgctctggcatcaagaatcagta
gaacttcaaaacatgatcaaggtctacacttcagcttacaagcaatacaaacgttcatgc
ccacctccttcgcacgaatcagtcaagaaggcgaaagaaatcaagcttgaacttttaggc
cctcatcctgtgtttgttgcagaaagttctgaactcgaaggagatcggctaaacttgttg
gaacagatgaagagctatcgtcctcatcacactatatttgaaattggtgtaacagccaat
tccgtgaaagctaaagttatgttagaaaaacgcatcaaacatcaaaggatcatcattaag
cagaaaaatgcgaatatgaaacagagcgaaacgaaaccatcagacgagcctgaaagtagt
ggtgttccacaggaagaagccaacgaagaattggttcaagaggctttcagtaccgttata
gcccaaaagaaacggaccagccgaaaaccatttgatcccaaccaatccaagaagagacga
cttcagtctcaaacaaccaaggacgaagaaaactacattaattacaattcgaaggatcac
cagacggaatcgggattggccctgggttgtgattttggacgagctgccgctgatgcggtt
ctggatttgacaggtgatgatgaccaggaacttcgtaaacagaggagcctcttaaagtgg
gatcgaaagaagaagaagtttatcggagaggacgataccaagaagcgtaagatccgtacc
gaatctggtgtttggattccagctacatacaaaactgaccgttacgagagatggaaggac
aaatctaaggttgaccaaaacgacccagctagtgaggattcgggtgatgatgaaaaggtt
ggcaatcgtaatgcacctgctcggttcgatggaggttatcagagacgaggtatccctatg
gggatgaatcttgaaggacgattgggaagcttaccaaagaatcatccagccatggtcaag
gcttgggctgaggttaagcaaggtggacagcgtgtgcgtgacgaggtgaagcgccctgag
caaatcgagaaggctcgcaaattgaaggagaaggctcgactgcgtggaaataaggaaatt
cggataaaacttcaaatgaagcaaaagaagccaactttgaagaccaaacaaaagaagggt
ggtaaaaggcgaaggtaa
DBGET
integrated database retrieval system
