Daphnia pulicaria: 124340340
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Entry
124340340 CDS
T08670
Name
(RefSeq) uncharacterized protein LOC124340340
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124340340
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
124340340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
124340340
NCBI-ProteinID:
XP_046648900
EnsemblRapid:
LOC124340340
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All DBs
Position
1:32352103..32354993
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AA seq
555 aa
AA seq
DB search
MIGVVLFDNHDDLLYVYSDREFKNRIHCVSDTLDMCAVPGEEVMDDDIRSRRDAESMILM
QIFSPLLTSHRIMNQEFQNSYDCIACEDGSTVAFYEQMGFLLITVARSSVNAVHLARVSF
SLMQHVCGPSLSVLKHSNTHSELATLLIETFLRLRQSSQPIVTESLHYEPISEAVNSSIL
RVLQVAVSDLNVRGGIPESRAHILIIKETSIVAIYSGKGTSELKIDEILFLIIVANAFDH
SRSSTRHSLIILESCVPYTIHIQRVEDGLDVVVLIEGGLHQIATGLFSLLKSLYATPIRS
DLISKQLKQVQKMAYKYNQRHQWWDLLVWRPEQSQNQSAMSAFSRQILRGFEIVCLNPSL
LFAAVEHVSAVIDDIQLSIPMQSLSQPCRLTPLLKIYPGLVHFVLIDRKNHRMISPALPL
GRHDSSFDNMWKIFHTSLEWLNEGMHNLLWNDKQLCYSHAIWIEDTSNKKLPWKSNWDMQ
TGTFGYPALMGSGFYENLMKGGLEDEEAETTHYLQFFCIHLALTSPSLVVEQSERMADHL
KRFIYPSFGKLEDLF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgtcgttttatttgacaatcacgatgatttgctctatgtttatagtgaccga
gagttcaaaaacagaattcattgcgtatcggataccttggacatgtgtgccgtgccagga
gaggaagtaatggacgatgacattcgatcgagaagagatgccgaatcaatgatcctcatg
caaatcttttctccgctcttgacttcacatagaatcatgaatcaagagtttcaaaattct
tacgattgtatcgcctgtgaagacggttccaccgtggccttttatgagcaaatgggattt
ctgctcatcacagtagccaggtcatctgtaaatgctgttcacttggctagggttagcttc
agtctcatgcaacatgtttgcggtccttcattatcagtgttgaaacactcgaatactcac
tcagagcttgccactcttctgattgaaacatttttaagattgagacaatctagtcagccc
attgttacagaatcactgcattatgaacccatcagtgaggctgtaaattcttccattcta
agagtcctccaagtcgcagtttcagatttgaatgtgcgtggaggaattccagagagcagg
gctcacatcctcatcataaaagaaaccagtattgttgccatttactctggaaaggggaca
tcagaattaaagattgatgagattctgtttctgattattgttgccaatgcctttgaccat
tctagatcttcaactcgccatagtctcatcatccttgaatcgtgtgtaccttacacaatt
cacattcaaagggtggaggacggtctcgatgtggtcgtcttaattgagggtggattgcat
cagatagccactggccttttttcattattgaaaagtctctacgcaacgcccataaggagc
gacttgatttcgaaacaattgaaacaagtgcaaaaaatggcttacaagtataatcagcgg
catcaatggtgggacttgctggtttggcgaccggagcagagccaaaatcaatcagccatg
tccgcattttcgcgccaaattctccgcggatttgaaatcgtctgcctcaatccatccctt
ctgtttgcagctgttgaacacgtttcggccgtgattgacgacatccaattgagtattccc
atgcagtccttatcgcagccctgcaggcttaccccactgctcaaaatctaccccgggctt
gtgcatttcgtcctcattgataggaaaaatcatcgaatgatctcccccgctctgccgctg
ggacggcacgactcctcctttgacaacatgtggaaaatctttcatacctccttagaatgg
ctaaatgaaggtatgcacaatttattgtggaacgataagcagctgtgctattcgcacgcc
atctggatagaggacacatcgaacaaaaaattgccatggaaatccaactgggacatgcaa
accggtacttttggctatccagctttgatgggtagcggtttttacgaaaatttaatgaag
ggagggctggaagatgaggaggccgaaacgacccattacctccagtttttctgcattcat
ctcgccctaaccagcccaagtcttgtagtcgagcagtcggaacgcatggctgatcacttg
aaacgatttatttatccttcgtttggtaagttggaagatctcttctag
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