Daphnia pulicaria: 124344383
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Entry
124344383 CDS
T08670
Name
(RefSeq) nuclear pore complex protein Nup214-like
Organism
dpz
Daphnia pulicaria
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WDCP
Motif
Other DBs
NCBI-GeneID:
124344383
NCBI-ProteinID:
XP_046653880
EnsemblRapid:
LOC124344383
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All DBs
Position
6:3099093..3104860
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AA seq
1652 aa
AA seq
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MANVPDPVEVLDFKMKQLCKFRVTKKEYDVQDTTSLLATSNLFGLIFVGTPDKLVVIKVS
DLIQIDNTTSKKSEISSFPIKEILLPNKPSFVTLSSDNLTLMVCLQKSGSSVGWMYDVRG
FARQSGEWNPFQEVRLSSTDGVTVKDCAWNPVIPTLVAVCLSDGSLVAVEINNTQFTINS
LPSSTGAQSVCWSPKGKQLVVARPSKLVQYKPDLKEAKTIAFSGSDVHMTQPMVCGLQWL
STSQFLVTFVDQNEPNSRPHLYIVNVQKSGATTFIDYDDVCYGSPSERPHSYLTLSLSQW
NVLLACSANAIEVAVLAQTGAGDADHPEWRQWALEGEWRAELPLNENAETNPLGMAIDTT
SQIPISWDDNQTLPPAPILFILSTHGLLCPFHVINLKNGAAKFNQAPQELSVTGERPALS
GIGLKAAPLAASTPLPAAGKIAFPRTNLGERFAAFADAPFLAVPVTTKPPSNPPISDSFL
GNKPQLQPALPSVTKVAPAPVVPAVKIEAVPVVPKATPLTVKLTSQTPIADESNIHSSMG
AAAAILRDEVAKFVQDLKEFKARSLTLKVTIASDEEKERLLKMTSDLAEFGVDLVDTTKV
QDEEVRGLCTDLVEVAALLEDARVRRARRKNSHFCHLLKLRPLDPGNRRKMDGIERLHVH
IEQQLVEASRSLDSISRDRTRDTRKIEIPITQVIYEAIRNNTKVISQLKSRVERIMVQSK
EQQLKLAGAAFEALRPKSGDESRKWESELAVLADSLLSSSIRGEGETQSHHPVIPQVSPD
KQAMLRSVLAHRPVARIRAVRPESVAESRLLSNLTGFIHGEDKKDTSSVSPKISQAPSKT
ILPTVKSVSYSTPQEIKSDLPMPKMGLPDHGFNAKVSMASSRVDFAKPTPRPPSEVEDVT
PPSSPVNLDQKAKSLGNQLMMSSLSLPSRAPVTTVEDTKPVSKMADFKPVVSLPTSLPPP
YEPKPSFSSVPTSTPILQHLSFGAPKKDLNSLGLGSTSLFGKSSFGSAFGAAASPSTTIA
AASSKPTAEVTSPFSTSGTPVTSAAIPATSVLPQTTKVVSTSSFGFSAPPALSASASTPS
LVASKPAEPAPTLKTSFSFKELSSLSGSTAPASITTTTVTPAAVTPSSFTFSSTSLTPSV
AAVTSAIAATPLPIVAPPSTTSNTDDSTTTVKPSVAPTNFSFSLAETPNSSSTSVPGATA
PFTFNLSGTGSATTSSTPTGFAAPSSTPVAGSLFSLTPSNKAPVAFGVVNTSSVSSPSIF
GQAAAPVVPTTTPAATSVFGQAPPLVPATSTSDSGVATLFGQSKPIQNVSLTTAAPVTQS
ALGLAVAPTSTPSALSPAPATTTIFGRPSAAPGSLFGQSVTTAGSFPSSFGQIGFAQPTS
TTSTTSSTSVFGQSSFAKPAQASGVQPTSTFGSPSVFGQSSGGTPSGLLVGNVFGQGAAP
ATTAIKPLFGVSTFGQTSVNAPTSSAPNANQGFGAGLFGSMGLGGTPTSANANRNVFGGS
SVFGGGTPSGQGTFGATSAPSSFGVQPTAAAPASSFGSTSPPSFGGFGQAQPAFGGAATF
GGSPLFGSKPTFGGGATFGSPVNSNVAPKPEAGFGAFAASSNVPTFGVLANSGPSFETLA
SSGNAQPAFGGAAFPASNPPSFGGGSSFSSWR
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgttcctgatcctgttgaagtcttggacttcaaaatgaaacagctgtgtaag
tttagagtcactaaaaaggaatatgatgtacaggacaccacatcattgctggctacttct
aatttgtttggtctgatctttgttgggacacctgacaaacttgttgtcatcaaagtttca
gatcttatacaaattgacaatacaacatcaaaaaaatcagaaatatcatcatttcccatc
aaggaaattcttttacccaacaaacctagttttgtaacactgagttctgataatcttacc
ttaatggtgtgccttcaaaaatctggaagctcagtaggttggatgtatgatgttcgtgga
tttgcaagacagtcaggtgaatggaatcccttccaggaagtcaggctttcgtctactgat
ggagttactgtgaaagattgtgcgtggaaccctgttataccaactctagtagctgtctgt
cttagtgatggctctttagttgcagtggagatcaacaacactcaattcactataaatagc
cttccatcaagtacaggagcccagtcagtctgttggagtcccaaaggaaaacagctagtt
gtggccaggcctagtaaactagttcagtataagcctgatttaaaggaagccaagactata
gcgtttagtggtagcgatgtccatatgactcagccaatggtttgtggacttcagtggctt
tccacatctcagttccttgtcacgtttgttgatcaaaatgaacccaattctcgtccccac
ctctacatagtcaacgtacaaaaatcgggggcaacaactttcatagattatgacgatgtt
tgctacggaagtccgtctgaaagaccacacagttatctaacattgagtttatcccaatgg
aatgtgttattggcttgttcagctaacgcaatagaagttgccgtgctagctcaaacagga
gctggagatgctgatcaccctgaatggaggcaatgggcactagaaggtgaatggcgagct
gaactaccattaaatgagaatgctgagactaacccgttgggaatggccatcgataccact
agccaaattccaatcagttgggatgacaatcaaactttaccgcccgcacccattcttttc
atactcagcactcatggtctgctttgcccgtttcatgttatcaatctaaagaacggtgct
gccaaattcaatcaggctcctcaagaattgtcggtcaccggtgagagaccagcgcttagt
ggaattggtctcaaggcggctccattagcagcttccactccattacctgctgctggtaaa
attgcatttcctagaacaaatcttggagaacgatttgctgcatttgcggatgctcctttc
ttagcagtcccagttacaacgaaaccaccttcaaatccgcctatttcggactcgtttttg
ggcaacaaaccccaacttcaacctgccttaccttcagtgacgaaagtggcacctgcacct
gttgtaccagctgtgaagatagaagcggttccggttgtcccgaaagctactccacttact
gtcaaactaacaagtcaaactccaatcgcagatgaatctaacatccattcatccatgggc
gctgccgctgcaatattacgtgacgaagtggccaaattcgttcaagacttgaaggaattc
aaagctcgttcgttgactttgaaagttacgatcgcgagtgatgaggagaaagaacgattg
ttaaagatgacatccgatctggctgagtttggtgtggacctggtcgatactaccaaagtg
caagacgaagaagttcgaggcttgtgcactgatttggtcgaagttgccgcccttttggaa
gatgcccgtgttcgacgtgctcgtcgcaaaaattctcatttctgtcatttgctcaagtta
cggcctctagatccaggcaatcgcagaaaaatggacggcattgagcgcttgcacgttcac
atagaacagcagcttgtagaagcttcacgaagcctagattcgattagcagagaccgtact
agagacacccgcaaaattgaaatccccataactcaggttatttatgaagcaattagaaac
aatacgaaagtaatttcacagttaaaatctcgtgttgaacgaattatggttcagagcaaa
gaacagcaactgaaactcgccggtgctgccttcgaagctttaagaccaaagagtggtgat
gagtcaagaaaatgggagtctgaactggctgttctggctgattctcttttgtcgtcaagt
ataagaggagaaggggaaactcaatcacaccatcctgtgatcccacaagtatcacctgat
aaacaagcaatgttaaggagtgtattagcgcatagaccggtagctcggattcgagccgtt
cgcccagaatcagttgcagaatcacgcttgctgtcaaatctcaccggttttattcacggt
gaagataagaaagatacttcttcagttagtcctaagatttcacaagctccttccaagacc
atattgcccactgtcaaaagtgtaagctattcgacaccacaggagattaaatcagacctg
cctatgcctaaaatggggttacccgatcatggattcaatgctaaggtctctatggcatcg
tctcgagtggattttgccaaacctactccacgtccgccctccgaggtcgaagatgttact
ccgccgtcttcaccagttaacttggaccaaaaggccaaatctctcggcaatcagctgatg
atgagcagtttgagtttaccctcgcgcgctcccgtaactaccgtggaagatacaaagccg
gtgtctaaaatggccgattttaaaccagtcgtttctttgcctacttcgcttccaccacct
tacgagcccaaaccttctttctcttcagtgcccacgtcaacacctattcttcaacacctt
tcgtttggtgctcccaagaaagacctaaactcactcggattaggatcgaccagtttgttc
gggaaatcttcctttggttccgcatttggcgctgctgcatccccttctacgactattgcg
gctgcatcatctaaaccaacagccgaagttacatcaccattctcaacttcaggaacgccg
gttaccagtgccgcaataccggctacgtcagttttgccgcagacaactaaggttgtttct
acttcttcgtttggcttctctgctccaccagctttatcagcctccgcttcaactccgtcg
ctggtggcatcgaaaccggcagagccagccccgactttaaaaacaagtttttctttcaaa
gagctttcatctctctctggatctacagctccggcttccattacaacaacaaccgtgacg
ccggctgcagtaacaccttcaagttttacgttttcttctacctcccttacaccttcagta
gcagcagtaacctctgctatcgccgctactcccttgccgattgtagcgccgccttcgacc
acttccaacactgatgattcaactaccaccgttaaaccgtcagtcgcaccgacaaatttc
tctttcagtttggctgaaactcctaacagttccagtaccagtgtaccaggagctactgct
ccttttacttttaatctctctggaaccggttcagctactactagttccacacccacagga
tttgcagcaccttcttccactcctgttgctgggtcattgttctctttgactccatcaaat
aaagcacccgtcgcctttggtgtagttaatacttcaagtgtgtccagtccctcaatcttt
ggtcaagcagcagcacccgttgtcccaacaacgacaccagcggccacatctgtctttggc
caagcaccacctctagttcccgcgacaagtacctccgattcaggcgtggcaactttattt
ggccaaagcaaaccaatccagaatgtatcattgactactgctgcccctgtcactcaatcc
gctcttggactggcagttgctcccactagcacaccttccgccttgtcgccagcaccagcc
acgaccacaatttttggtcgtccatcagcagcccctggaagtttgttcggtcagtctgta
acgactgccggatctttcccatcttccttcggacagattgggtttgcccagcctacttca
acaacttcgactacatcaagcacctcagtctttggacagtcaagctttgccaaaccagct
caggctagtggagtacagccgacttcaacctttggttcgccctccgtgtttgggcaatca
agtggtggaacacccagtggattgttagtagggaacgtttttggacaaggtgcggctcca
gcaacaaccgcgatcaaaccgctgtttggggtatctacatttggacaaacatctgtgaat
gctcctacttcttcagctccaaatgccaaccaaggatttggtgccggtttgtttggtagc
atgggactcggtggtaccccaacctctgccaacgctaaccgcaatgttttcggcggatcg
tctgtatttggtggtggcactccatctggtcaaggaacgttcggagcgacttctgcgcca
tcttcttttggtgttcaacctactgctgctgctccagcttcttcgtttggcagtacttca
ccgccaagttttggaggctttggacaagcccaacccgcattcggaggagctgcgaccttc
ggtggttccccgctattcggaagcaaacctacctttggtggtggagcaacatttggttct
cccgttaacagcaatgttgcgccaaaaccagaagcgggatttggtgcctttgctgcttcc
agtaacgtccctacatttggagtacttgcaaactctggaccatcttttgaaactttggca
agtagcggtaatgcccaaccagcctttggaggtgcagcttttccagcaagcaatccacca
tcatttggagggggaagttctttttcgtcgtggcgttaa
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