Deinococcus radiodurans: DR_1289
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Entry
DR_1289 CDS
T00025
Name
(RefSeq) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dra
Deinococcus radiodurans
Pathway
dra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR_1289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dra03019
]
DR_1289
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_1289
Enzymes [BR:
dra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DR_1289
Messenger RNA biogenesis [BR:
dra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR_1289
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DR_1289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
RecQ_Zn_bind
DEAD
Helicase_C
HHH
HHH_5
ResIII
Motif
Other DBs
NCBI-GeneID:
1799726
NCBI-ProteinID:
NP_295013
UniProt:
Q9RUU2
Structure
PDB
LinkDB
All DBs
Position
1:complement(1293434..1295908)
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AA seq
824 aa
AA seq
DB search
MTAAPAALHDRALHLLQTIWGYPAFRGVQGEIVQQVAEGGNALVLMPTGGGKSLCYQLPS
LLRPGTGIVVSPLIALMKDQVDTLRQNGVRAAFLNSTLLPHEAREVEDALLRGDLDLLYV
APERLLMPRTLDLLERAPVALFAIDEAHCVSQWGHDFRPEYQQLSVLAERFPELPRVALT
ATADERTRADIKSVLRLEDAPQFVSSFDRPNIQYRVGLKDSPKTQLLHFIREEHPGDAGI
VYCLSRKSVEETAKWLQAQGIDALAYHAGLSSTERNNVQERFLNEEGVIVCATVAFGMGI
DKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLSDVVNVRRMLAQSDAPEE
VKRVEASKLDALLTYCEAATCRRQVLLHYFGEELSEPCGNCDVCLNPPRVRDLTREAQMA
LSATIRTGNRFGAAHLTDVLLGRETDKVLAQGHHQLPTFGVGKEHDEKLWRSVLRQLVSL
GYLSADDHFGLRATGKSRGILKEGQKLLLREDTLLPGAGKSKRDRASASRAALDSHDAPL
FEALRAWRLQKAKELSLPPYTIFHDATLKTIAELRPGSHATLGTVSGVGGRKLAAYGDEV
LQVVRDSSGGGQAGPENLLDSPAFDPAVRGARNNNAVLDVLGSKGELQPQPKPAHPGVLG
ALRELRRTLAAEQGRSLSWVFPEATIDELARKLPTRSEELKDVFGLGGQRIQAFGDRILA
TIRAELTGGAPSPAPSAPAALFDEAVPPAPNADLSEALRELRRELMKETGYSAFVVFTNA
TLEALAARQPRTLAELAEVPGLGEKRIEAYGERILDAINTVLDG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgctcctgccgccctccacgaccgcgccctgcatctgctccagaccatctgg
ggctatccggccttccggggcgtgcagggcgagatcgtgcagcaggtggcggaaggtggc
aacgcgctggtgctgatgcccaccggcggcggcaaaagcctgtgctaccagctgccctcg
ctgctgcggcccggcaccggcatcgtggtgtcgccgctgattgcgctgatgaaagaccag
gtggacaccctgcggcaaaacggcgtgcgggcggctttcctcaactcgacgttgctgccg
cacgaggcgcgtgaggtggaagacgctttgctcaggggcgacctcgacctgctgtacgtt
gcccccgaacgcctgctgatgccgcgcaccctcgacctgctggagcgcgcgcccgtcgcc
ctgttcgccatcgacgaggcgcactgtgtctcgcagtggggccacgacttccggcccgag
taccagcagctcagcgtgctcgccgagcgctttccagagctgccccgcgtcgccctgacc
gccaccgccgacgagcggacgcgcgccgacatcaagagcgtgctgcgcctggaggacgcg
ccgcagttcgtctcctccttcgaccggcccaacattcagtaccgggtgggcctcaaggac
agccccaagacgcaactgctgcacttcatccgcgaggagcaccctggggacgccggaatc
gtctactgcctctcgcgcaagtcggtggaagaaacggcgaagtggttgcaggcccagggg
atagatgcgctcgcgtaccacgccggcctctcctcaaccgagcgcaacaacgtgcaggag
cgctttctgaacgaggaaggcgtcatcgtgtgcgcgaccgtcgccttcgggatgggtatc
gacaagccgaatgtgcgcttcgtggctcacctcgacctacccaagagcatggagggctac
taccaggaaacgggccgcgccgggcgcgacgggctgccgagcaccgcgtggatggtctac
ggcctgagcgatgtggtgaacgtgcgccggatgctcgcccagagcgacgcgccggaggag
gtcaagcgggtggaggcgagcaaactcgacgcgctgctgacctactgcgaggccgcgacc
tgccgccgtcaggtgctgctgcactacttcggtgaggaactgtccgagccctgcggcaac
tgcgacgtgtgcctgaacccgccgcgtgtgcgcgacctgacccgcgaggcacagatggcg
ctgtcggccaccattcgcaccggcaaccgttttggggcggcgcacctcaccgacgtgctg
ctgggccgcgaaaccgacaaggtgctcgcgcaggggcaccaccagctcccgaccttcggc
gtgggcaaggaacacgacgaaaagctgtggcgctcggtactgcgccagctcgtcagcctg
ggatacctgagcgccgacgaccatttcggcctgcgggccaccggcaagtcgcgcggcatc
ctcaaagaggggcaaaagctgctgctgcgcgaggacacgttgctgccgggcgcgggcaag
agcaagcgcgaccgggcgagtgccagccgcgcggctctggacagccacgacgccccgctg
ttcgaggcgctgcgggcgtggcgactgcaaaaggcgaaggagctgagcctaccgccctac
actatctttcacgacgcgaccctcaaaacgattgccgagctgcgccccggcagccacgcg
actctcggcaccgtgagcggcgtcggcggacgcaaactggcggcctacggcgacgaggtg
ttgcaggtcgtgcgcgactccagcggcgggggccaggcgggaccggaaaacctgctagac
agcccggccttcgacccggcggtgcgtggcgcgcgcaataacaacgcggtgctggacgtg
ctcggcagcaaaggcgagttgcaaccgcagcccaagcccgcgcatcccggcgtgttgggt
gccctccgcgaactgcggcgcacgctcgccgccgagcaggggcgctcgctgtcgtgggtc
tttcccgaggcgaccatcgacgaactcgcccgcaaactgcccacccgcagcgaggagctg
aaggacgtgttcggactgggaggccagcggattcaggcgttcggggaccggattctggcg
accattcgggccgagttgacggggggtgcgccatcgcccgcaccgtcagcccccgccgca
ctgttcgacgaagccgttccgcccgcccccaacgccgacctcagcgaagccctgcgcgag
ctgcggcgtgagctgatgaaggaaacgggctacagcgccttcgtcgtgttcaccaacgcc
acgctcgaagccctcgccgcccggcagccgcgcacgctcgccgagctggccgaggtgccg
ggtctgggcgaaaagcgcatcgaggcgtatggggaacggattctggatgcgatcaacacg
gtgctcgatggataa
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