Danio rerio (zebrafish): 100006685
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Entry
100006685 CDS
T01004
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100006685 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
100006685 (fancm)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100006685 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
Helicase_C
DEAD
ResIII
ERCC4
MRC1
Motif
Other DBs
NCBI-GeneID:
100006685
NCBI-ProteinID:
NP_001107132
ZFIN:
ZDB-GENE-090929-1
UniProt:
A8QLH8
LinkDB
All DBs
Position
17:648899..726602
Genome browser
AA seq
1761 aa
AA seq
DB search
MSGAQRTLFQAWGQSGAPRTRSPQQPEIKPYAAAADDDDDDDDVLLVAVCEAERSAGDLG
FDYSAGRVWIYPTNLPLREYQLRVCEAALLQNTLVCLPTGLGKTFIASVLMYNYYRWFPA
GKIVFMAPTKPLVAQQIEACYRVMGIPQEHTAELTGSTAAPQRRSLWSSRRVFFLTPPDR
CVVIDEAHKATGNHAYCQVIRELRKQTPQFRVLALSATPGGDVKAVQQVISNLLISHIEL
RSEDSPDVQTHVHQRSLEKMVVPLGESLTHYQTRYLQVLERFSSRLTQMRLLNQRDLRAF
SKYQIILAREQFRRNPPPHIQGPQQQGVLEGDFALLISLYHGFELLLQMGIRSLFLFIQN
IFTGPRESSRVRNELQRCSLFMDLYREMENMFNTASRGLEEPYVYTHPKLQKLDEVVLRH
FQTCAESSDVSAVDTRVMIFSSYRESVQEIAEMLNRHQPLVRVMTFMGQASAGRGVRGFT
QKEQLEVVWRFREGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRQR
QGRIVVILAEGREERTYNQSQSNRRSINKSIMGNKHSFQMFSDSPRMLPADVTPALHKMH
ISCAQQFQHRDSGRRSSKSRRSSLTLNMTAGADQRCLKQDWSLSAAEQAVWSSSMRLSET
EAQPVFRPSSMLSFNEERAPLCGSGVCVSGECVCVSRPLRELSLWEWRHWQNRPLHTHRV
QHSERCLHFTTIMELIDTLRHQEEEGDCSVQSELMKHLQMEDIDGGQTSTNNRTASSTEE
QRNATPAAHTPGALLQVQECVSISDGVDDDVQTCSAAAHECVECLLDGQEDESSDLQHIF
YQPELQKPKRCRHSLNSRRFLEIIRNVEQMLCRSPPKLLEEEEPLTEGFRVSFSLTSALG
DPDEDDEDTGVCAQSTAPSAAAAGSPGWDELFDDALLEDGDGFMKAEERQEDQLSLDLFD
DEDFLQMSMPDVQTPDNSTGPEGEQPEEKHQTLADVSGERSTLTGPEGEQQAPPNVSGSR
LNITGPDGEHSEQKHWTLADCSRRSSITGPDGEQVTPVSVSGSRLNLTGPEGEQRTPVNV
TQGRSNLTGPEGKQETEGSRSRSSLTGPEGEQESPVNVTGSRSNLTGPEGEQAAGGSGSS
CVFRCSQDFFSVNFGLGFESESEEEAAAGASVSGLTSDLPPLTSDLCSAAPQPSASTPNH
LYLSAHRRTHTPIQRRRTCAGVFVSDSEDETHHQRFPALELAPVFSPEVKQQQQQEVSSD
VDSPLQVCRKRTATLNTSEDSDGDDVLQLISVHQSGRHRSIKKFPRGAARQFLDEEAELS
EDEDGDVSSDEDDGDEQNQSLQGFVVNNTQCSQGLNDSEMQAFYLKSVRSPALQKPVRMT
FKPKHNLNIFSQVPEQDESYAEDSFVVDGSEEEDEVSADEESVELIPEDSFIDGRRQYAT
RRRARIRQIRAANPATDQQRKNKRSRIIRPQDSSDEDEDQPQTHTVFKVPQSVCRRPEPE
IQKRQRLEDQAELSEELDFQTHKQAPDAGFPVSADAPLAVLVDARCISGGSELLSLLRIR
HHLQVHVCSLGSTDFIVSNRTAVEWQSESEVSSAHNRRRLQERMQRLQATYERVCLIIQK
DRTRPGETVRVFQRSRYYDSTLAALVTAGVRLLFSNGFDETATILTDLTQVEKRKGQAIQ
VPLEVKGHRQQALQFYLTLPNMSYICALNMSHRFSSISHMISSSVEDLQASACVSRSRAE
EIYRCLRYSCDPVLINQTNQT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgctcagaggactctgttccaggcgtggggccagagcggagccccgaggacc
aggagcccgcagcagcccgagattaagccgtacgctgctgctgcagatgatgatgatgat
gatgatgatgtgttgctggtggcggtgtgcgaggccgagcgcagtgcaggggatctgggc
ttcgactactccgccggccgtgtctggatctaccccaccaacctgccgctgagggagtac
cagctgcgagtgtgtgaggcggcgctgctccagaacacactggtctgcctgcccaccggc
ctcgggaagaccttcatcgcctctgtgctgatgtacaactactaccgctggttccccgca
ggcaagatcgtcttcatggcgcccaccaaacccctggtggcgcagcagatagaggcctgc
tacagggtgatggggatcccacaggagcacacggcggagctcacaggctctacagcggct
cctcagcggcgctccctctggagctccaggcgtgtgttcttcttgactccgccggacagg
tgtgtggtcatcgacgaggctcacaaggccacaggaaaccacgcctactgccaggtgatc
cgggagctccgcaagcagacgccgcagtttcgggttctggctctcagtgccacacctgga
ggagacgtcaaggcggtgcagcaggtgatctccaatctgctgatctcccacatcgagctg
cgctctgaggacagtccagatgtccagacccacgtccaccagcgcagcctggagaagatg
gtggtgccgctgggagagtcactaacacactatcagacacgctacctgcaggtcttggag
cgtttctcatcccggctgacccagatgcggctgctgaatcagcgtgacctcagagccttc
agcaaataccagatcatactggcccgagaacagttcaggcgcaacccgccaccgcacata
cagggtcctcagcagcagggtgtgctggagggggattttgcgctcctcatcagtctttat
catgggtttgagctgctgctgcagatgggcatcaggtctctgttcctcttcatccagaac
atcttcactggaccccgagaatcgtctcgagtgaggaatgagctgcagaggtgttcactc
ttcatggatctctacagggagatggagaacatgttcaacacggctagcagaggtcttgaa
gagccgtatgtctacacacaccctaaactgcagaagctggatgaggtggtgctgcggcac
ttccagacgtgtgcggagagctcagatgtgtcagcagtggacacgcgcgtgatgatcttc
tcctcgtaccgtgagagcgtgcaggagatagccgagatgctgaaccgacaccagccgctg
gtcagagtcatgaccttcatgggccaggcgtctgcggggagaggggtcaggggattcacc
cagaaagagcagctggaggtggtgtggcggtttcgtgagggcggtttcaacactctggtc
tccacgtgtgtgggtgaggagggtctggacattggggaggtggacctgattgtgtgtttc
gatgcgcagaagagccccatccgtctggtgcagcgcatgggccgcacgggccgccagagg
cagggacgcatcgtggtcatcctggccgagggccgagaggaacggacttataaccagagc
cagagcaaccggcgcagcataaacaagagcatcatgggaaataagcacagtttccagatg
ttttctgacagtcctcgtatgctgccggcagatgtgactccagcgctacacaagatgcac
atcagctgcgctcagcagttccagcacagagacagcggacgcagatccagcaagagccgc
cgctcatccctcaccctcaacatgaccgcaggtgctgatcagcggtgtttaaagcaggac
tggagtctgagcgccgctgagcaggccgtgtggtcgtccagcatgaggctgtcagagact
gaagctcagccggtgttcagaccctccagcatgctcagcttcaacgaggagcgcgcaccc
ctgtgtgggtcgggagtgtgtgtgtctggagagtgtgtgtgtgtgtcgcggccgctaaga
gagctgtccctgtgggagtggagacactggcagaaccggccgctgcacacacaccgcgtc
cagcattcagagcgatgccttcatttcaccaccatcatggagctgatcgacactctgaga
caccaggaggaggagggcgactgcagcgttcagtctgarctcatgaagcatctccagatg
gaggacattgatggaggacaaacaagcaccaacaacaggacagcatccagcactgaagag
cagaggaacgctactcctgcggcacacaccccgggtgctctccttcaggtccaggagtgt
gtgtccatctcagatggtgttgatgatgatgtgcagacgtgttccgctgctgctcatgag
tgtgtggagtgtctgctagacggacaggaggacgagagctcagatctacagcacatcttc
taccagccggagctccagaagcccaaacgctgccgtcacagtctgaacagcaggaggttt
ctggagatcatcagaaatgtggagcaaatgctgtgcaggtctccacctaaactgctggag
gaggaagagccgctgactgagggcttcagggtcagcttcagcctgacgtcagcactggga
gaccctgatgaagatgatgaagatacgggtgtctgcgctcagagtacagcaccgtctgca
gcagctgctggatctcctggctgggacgagctgtttgatgacgctctgctggaggatgga
gacgggtttatgaaggctgaggagcgtcaggaggatcagctgagcctcgacctgttcgat
gatgaagacttcctgcagatgagcatgcctgatgtgcagacgccagacaacagtacagga
cctgaaggagagcagcctgaggagaagcatcagactctcgctgatgtgtcaggagaacgg
tcgactctcacaggacctgaaggagagcagcaggctcctcctaatgtgtcaggcagtaga
ttaaacatcacaggacctgatggagagcactctgagcagaaacactggactctcgctgat
tgttcaagaagatcaagcattacaggacctgatggagagcaggtgacacctgtcagtgtg
tcgggtagcagattaaacctcacaggacctgagggagagcagcggacacctgttaatgtg
acacaaggtagatcaaacctcacaggacctgaaggaaagcaggagacagaaggttcaaga
agcagatcaagccttacaggacctgaaggggagcaggagtcgccagtcaatgtcacggga
agtagatcaaacctcacaggacctgaaggagagcaggcggcgggcggttcagggagcagc
tgtgtgttccgctgctctcaggattttttctcggtgaactttggcctgggcttcgagtct
gagtctgaggaggaagcagcagcaggcgccagcgtctctgggttgacctctgacctccca
ccgctgacctctgacctctgcagtgcagcaccacagcccagcgcatccacacccaaccac
ctgtacctgtctgcgcacagaagaacacacacacctatccagaggagacgcacctgcgca
ggtgtgtttgtcagtgacagtgaggatgagactcatcatcagagatttccagcgcttgaa
ctggctccagtcttctctccagaggtgaagcagcagcagcagcaggaggtcagcagtgat
gtggattctcctcttcaagtgtgtcggaagcgtacggctacattaaacacgtcagaggac
agtgatggagacgatgtccttcagctcatcagtgttcatcagtctggacgccacagatca
attaaaaagtttccccgtggcgcggctcgtcagtttctggatgaggaggccgaactctct
gaggatgaagatggagatgtttcctcagatgaagatgatggagacgagcagaaccaatca
ctgcagggcttcgtggtcaacaacacacagtgctcgcaggggctcaacgactctgagatg
caggcgttttatctgaagtccgtcaggagtccagcgctgcagaagccggtgcgcatgacc
tttaaacccaaacacaacctcaacatcttctcacaggtgccagaacaggacgagtcgtac
gccgaggacagttttgtggttgatggaagcgaggaggaggatgaagtgtctgctgatgag
gagtctgtggagctgatccctgaagactccttcatcgatgggaggaggcagtacgccacg
cgccgcagggctcggatacggcagatacgtgcggcaaaccctgccacagatcagcagcgt
aaaaacaaacgctcccgcatcatccgcccacaggattctagcgatgaggacgaggaccaa
cctcagacccacactgtgtttaaagtcccgcagagtgtctgccgtcggcccgagccggag
atccagaagaggcagagacttgaagatcaggcagagctgtcagaagagctggacttccag
acccacaaacaggctcctgacgctgggttcccagtgtctgcagacgctcctctggctgtg
ttagtggacgctcgctgcatcagcggcggctcagagctgctgtcgctcctgcggatccgc
catcatttgcaggtccacgtctgctctctgggcagcacagactttatcgtcagcaaccgc
accgctgtggagtggcagagcgagtctgaggtgtccagcgctcacaaccgcagacgtctg
caggagcgaatgcagcgtctgcaggccacatatgagcgtgtgtgtctgatcatccagaag
gacagaaccagacctggagagacggtgcgagtgttccagcgcagccgctattatgactcc
acactggcggctctggtgacggcgggcgttcggctgctgttcagtaacgggttcgacgaa
accgccactatactgaccgatctcacacaggtggagaagaggaaaggtcaggccatacag
gtgccactggaggtcaaagggcaccggcagcaggcactccagttctacctgacgctgccg
aacatgagctacatctgtgctctgaacatgagccaccgcttcagctccatcagccacatg
atcagcagctcagtggaggatctgcaggcctcggcgtgtgtcagtcgctccagagctgag
gagatctaccgctgcctgcgctacagctgtgacccggtgctgataaaccagactaaccag
acctga
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integrated database retrieval system
