Danio rerio (zebrafish): 100101645
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Entry
100101645 CDS
T01004
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
100101645 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
100101645 (usp47)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100101645 (usp47)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100101645 (usp47)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100101645 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Motif
Other DBs
NCBI-GeneID:
100101645
NCBI-ProteinID:
NP_001318058
ZFIN:
ZDB-GENE-070719-7
Ensembl:
ENSDARG00000102645
UniProt:
A0A0R4IFT8
LinkDB
All DBs
Position
7:65398025..65464573
Genome browser
AA seq
1354 aa
AA seq
DB search
MEMVPSEEKQLVPKEIESAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTTLSKFFEDVA
HKAGYVNGTFCLSWANTGDMAPLDQASEMSLVMSGFEAGKRNFLQLTDKDGEQPQIASDE
SATADSGGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSYSSILNKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDGVDEGICLDNASSAERVLKPKSSLTFELFSVMVHSGSA
AGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
MYRLKDPSRNAKFLEVEDFPEHIKRLVQREKESEEQEKRQREIERNTCKIKLFCMHPVKM
MMMENKLEVHKDKTLNEATEMAYKLMDLEGVVPLDCCRLVKYDEFHEYLERSYEGEEDMP
MGLLLGGVKSSYMFDLLLEIRRPEQAFQPYKPGEVMVKVHVVDLKSESIAAPVSVRAYLN
QTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSDS
TDHQAAFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSFANRTSCPKASADSEDSFDGAKAG
RKSVEAILEESTEKLKNLSLQQQQQQQQTSSTSDSQKSSEHSDFEHIESPAQEPDASSQP
SQTENCTRAASDTDNQFPSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSGPLPL
ANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENGKSKADTQYLYFKAEPYSQ
EDGAGDGQKSLLVHVDKRITLAAFKQNLEPFVGVPSTQFKVFRVYANNQEFESVRLNETL
SFFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLLDTVFAKGMTVRQSKEELLP
QLKDQCKLDLSIDRFRLRKKTWKNPGTVFLDYHVYEEDINISSNLEVFLEVLEEPERMKS
MSQLAVLTRRWCPAQMKLEAFREVVLESSSVEELKEKLSEVSGIPLENLEFAKGRGTFPC
DISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDSSEELMELSEEERNELMKKESS
RLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGLD
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagattgaaagtgcagcg
gaggagccaagagtgttgtgtatagtgcaggacaccaccaatgccaagaccgtcaatgag
aggctgacgctcaacctgcccgcctccaccactctcagcaaattctttgaagatgtggcg
cacaaggctggatacgtcaacggcactttctgcctgtcatgggccaacactggcgacatg
gctcctctggaccaggccagtgaaatgtccctggtgatgtccggttttgaggcggggaaa
agaaattttctgcagctcacagacaaggatggggagcagccgcagatcgcttcagatgaa
tctgccacagcagacagcggtggtcttgatgacagctctcaggatcgcttcatcggaccc
ttaccgcgggacggtactgtaggctgcagcagtgactacagcagccccagttattcctac
tcctccatactcaacaaatcagagacaggttatgttggtttggtcaaccaagcgatgacc
tgttacctgaacagcctcctgcagacccttttcatgacccctgagttcaggaatgcactc
tataattgggagtttgaggattctgaggaggatccggtcaccagtattccataccagctc
cagaggctgtttgttctcctgcagaccagtaaaaagcgtgccatcgagaccacagacgtg
acccgcagctttggctgggacagcagtgaggcttggcagcagcatgacgtccaggagctg
tgccgagtcatgtttgatgcactggagcagaagtggaaacagactgagcaggccgacctg
atcaaccagctttaccagggcaagctgaaggactatgtgcgctgtttggagtgtggctat
gagagctggaggattgatacgtacctggacatccctctggtcatcaggcccttcggcgcc
agccaggcttttggcagcgtggaagaagctctgcaggccttcatccagcctgagactcta
gacgggcccaatcagtacttctgtgagcgctgcaaaaagaaatgtgacgcccggaagggt
ctgagattccttcatttcccatacctgctgactctgcaactgaaacgcttcgactttgat
tacaccactatgcaccgcattaaactcaacgaccgcatgaccttccctgaggagctggac
atgagccccttcattgatgtcgaggatgagaaatctcctcagactgaaagttgcactgac
agtggggcagagaatgaaggaagctgccacagtgaccagatgagcaacgatttctctacg
gatgatggtgtagatgagggcatctgtctggataacgccagcagcgcggagcgggtgctc
aaaccaaagagctccttgacctttgaactcttctcggtcatggtgcattctgggagtgca
gcaggtggacactactatgcctgcatcaagtccttcagtgacagccaatggtacagcttt
aatgaccagcacgtcagcaagatcacgcaggacgacatacggaagacatatggcggatcc
tcagggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctg
atgtacagactaaaagacccctccaggaatgcaaagtttctggaggtggaggattttcct
gagcatataaagagactggtgcagcgagagaaagagtctgaggagcaggagaagaggcaa
agagaaattgagcgcaacacttgcaagatcaagctgttctgcatgcatcctgtgaagatg
atgatgatggaaaataaactggaggttcacaaggacaagaccctcaatgaagcaactgaa
atggcctataagctgatggatttggagggagtggtgcccctggactgctgtcgattggtc
aaatacgatgagtttcatgaatatctggaacgttcgtatgagggtgaagaagacatgccc
atgggtttgctgctcggcggggtcaaatcttcatacatgtttgacctgctcctggagatc
cgcagacccgagcaagcgttccaaccctacaaacctggagaagtgatggtgaaggtccat
gtggtggatctaaagagtgaatctattgccgcaccagtcagtgtcagggcatatctcaac
cagactattacagagtttaagcaactcattgcacaggcaacgggactttgtgcagagacg
atgcgtgtcgtcttagagcgctgctataatgaccttcggcttctttatgtgcccaacaag
accctgaaagcagaaggtttcttcaggagtaacaaggttttcgtggagagctccgactct
acggatcatcaggctgccttcaccgactctgttctgtggaagctcctggaccgccacgga
aacacaatcagactctttgtctctctgcctgagcagtcgccaggctctttcgccaataga
actagttgccccaaagccagcgctgactccgaggactcttttgatggcgccaaggccggc
agaaagtcagtagaggcgatccttgaagagagcacagagaagctgaagaacctttcttta
cagcaacaacagcagcagcagcaaacctccagcaccagtgacagtcagaagagctccgaa
cacagcgatttcgagcacatcgagtcaccagcacaggagccggatgcttcctcacagcct
tcgcagacggagaactgcacgcgggccgcttccgacacggacaaccagttcccttctgag
gagcgttcagactcggatgtcaataacgaccgcagcaccagctcagtggacagcgatatc
ctgagctccagccatagcagcgacacactgtgtaatgcagacagcggcccgctgccattg
gctaacggattggactcacacagcatcaccagcagccgacgctccaaggcacatgagggg
aagaaggagacgtgggacacggcagaggaggactcaggcacggacagcgagtatgatgag
aacggcaagagcaaagctgacacgcagtacctgtacttcaaagcagagccgtactctcag
gaggacggggctggagacggacagaaaagtttacttgttcacgtggacaagaggatcaca
ctggcagcattcaaacagaatctagagccgtttgttggcgtgccctccactcagttcaag
gtcttccgagtttacgccaacaaccaggagtttgagagcgtcaggctcaatgagacgctc
tcctttttctccgatgacaacaagatcaccattcgattgggacgtgctctgaagaaagga
gagtacagggtgaaggtctaccagctgctagtcaatgacccagagccctgtaagttcctt
ttggacactgtgttcgcaaagggcatgactgttcgacagtctaaggaggagttactgcct
cagctaaaagaccagtgcaaactggacctcagtatagacaggtttagactcaggaagaag
acctggaagaacccaggcacggtgtttctggattatcacgtctacgaggaggacatcaac
atctccagtaacctggaggtgtttctggaggtccttgaagaaccggagaggatgaagtct
atgtcccagttggcggttctgacccgtcgctggtgtccggcccagatgaagctggaggcc
tttcgggaggtggtgctggagagcagcagcgtggaggagctcaaggagaagctcagtgaa
gtgagtggaattcctctagaaaacctggagtttgccaagggacgaggaacttttccttgt
gacatttcagtgctggagatccatcaggatttagactggaatccaaaggtctccaccctt
aatgtatggccgctctacatctgcgacgacggcgctgtgatcttctacagggacagcagt
gaggagctgatggagctttccgaagaggagcgcaatgaactgatgaagaaggagagcagt
cgcctgctgaagacgggccaccgggtcagctactcgccccgcaaagagaaagcactcaaa
atctacttggacggagggcccaccaaagacccaggactggactga
DBGET
integrated database retrieval system
