KEGG   Danio rerio (zebrafish): 100333845
Entry
100333845         CDS       T01004                                 
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03440  Homologous recombination
dre04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100333845 (brcc3)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100333845 (brcc3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    100333845 (brcc3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    100333845 (brcc3)
   03036 Chromosome and associated proteins [BR:dre03036]
    100333845 (brcc3)
   03400 DNA repair and recombination proteins [BR:dre03400]
    100333845 (brcc3)
Peptidases and inhibitors [BR:dre01002]
 Metallo peptidases
  Family M67
   100333845 (brcc3)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    100333845 (brcc3)
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    100333845 (brcc3)
   BRISC complex
    100333845 (brcc3)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     100333845 (brcc3)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     100333845 (brcc3)
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB UPF0172
Other DBs
NCBI-GeneID: 100333845
NCBI-ProteinID: NP_001410780
ZFIN: ZDB-GENE-100215-1
Ensembl: ENSDARG00000098242
LinkDB
Position
21:complement(44545412..44556275)
AA seq 287 aa
MWKCSTVINKNKLIKAEYHTFYTLLFAMAVNAVHLESDAFLVCMNHALSTEKEEVMGLCI
GEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMRVVGWYHS
HPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSE
YERIEIPIHVVPHEAIGKVCLESAVELPRILCQEEQDTYRRIHSLTHLDPITKIHNGSVF
TKNLCSQMSAISGPLLQWLEDRLEQNKQSIITLQKEKELLTQELAAL
NT seq 864 nt   +upstreamnt  +downstreamnt
atgtggaagtgtagtacagtaataaacaaaaacaaactaatcaaagcagaatatcataca
ttttatactttactgttcgcgatggctgtcaacgcggtgcatttagagtcggacgcgttt
ctggtgtgtatgaaccacgcgctgagcaccgagaaagaggaggtgatggggctctgcatc
ggagaggtggacacgaaccgtatagtgcacattcattcagtgatcatcctgcggcgctca
gacaagaggaaagaccgagtggagatttcaccagaacagctgtcagcagcgtccaccgag
gccgagaggttggcagagatgacgggacgtcccatgagggttgtgggctggtaccactct
cacccgcacatcacagtgtggccttcgcatgtggatgttcgcactcaagccatgtatcag
atgatggaccagggctttgtcggactcatcttctcctgctttatagaggataaaaacaca
aagactggtagagtgctgtacacctgcttccagtctgtacaggcccagaaaggctcagag
tatgagcggatcgagatcccaatccatgtcgttccacatgaagccattgggaaagtgtgt
ctggagtcggcagtggagttacccagaatcctctgtcaggaagagcaggacacgtacagg
aggattcacagtttaactcacctggatccgatcacaaagatacataatggatcagtgttc
acgaaaaacctgtgcagtcagatgtcggccatcagcgggccgctcttacagtggctggag
gaccgactggagcagaacaaacagagcatcatcacactgcagaaggagaaagagctgctg
acgcaagagctggcggcattgtaa

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