Danio rerio (zebrafish): 100333845
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Entry
100333845 CDS
T01004
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
dre04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100333845 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100333845 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
100333845 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
100333845 (brcc3)
03036 Chromosome and associated proteins [BR:
dre03036
]
100333845 (brcc3)
03400 DNA repair and recombination proteins [BR:
dre03400
]
100333845 (brcc3)
Peptidases and inhibitors [BR:
dre01002
]
Metallo peptidases
Family M67
100333845 (brcc3)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100333845 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
100333845 (brcc3)
BRISC complex
100333845 (brcc3)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
100333845 (brcc3)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100333845 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
100333845
NCBI-ProteinID:
NP_001410780
ZFIN:
ZDB-GENE-100215-1
Ensembl:
ENSDARG00000098242
LinkDB
All DBs
Position
21:complement(44545412..44556275)
Genome browser
AA seq
287 aa
AA seq
DB search
MWKCSTVINKNKLIKAEYHTFYTLLFAMAVNAVHLESDAFLVCMNHALSTEKEEVMGLCI
GEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMRVVGWYHS
HPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSE
YERIEIPIHVVPHEAIGKVCLESAVELPRILCQEEQDTYRRIHSLTHLDPITKIHNGSVF
TKNLCSQMSAISGPLLQWLEDRLEQNKQSIITLQKEKELLTQELAAL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagtgtagtacagtaataaacaaaaacaaactaatcaaagcagaatatcataca
ttttatactttactgttcgcgatggctgtcaacgcggtgcatttagagtcggacgcgttt
ctggtgtgtatgaaccacgcgctgagcaccgagaaagaggaggtgatggggctctgcatc
ggagaggtggacacgaaccgtatagtgcacattcattcagtgatcatcctgcggcgctca
gacaagaggaaagaccgagtggagatttcaccagaacagctgtcagcagcgtccaccgag
gccgagaggttggcagagatgacgggacgtcccatgagggttgtgggctggtaccactct
cacccgcacatcacagtgtggccttcgcatgtggatgttcgcactcaagccatgtatcag
atgatggaccagggctttgtcggactcatcttctcctgctttatagaggataaaaacaca
aagactggtagagtgctgtacacctgcttccagtctgtacaggcccagaaaggctcagag
tatgagcggatcgagatcccaatccatgtcgttccacatgaagccattgggaaagtgtgt
ctggagtcggcagtggagttacccagaatcctctgtcaggaagagcaggacacgtacagg
aggattcacagtttaactcacctggatccgatcacaaagatacataatggatcagtgttc
acgaaaaacctgtgcagtcagatgtcggccatcagcgggccgctcttacagtggctggag
gaccgactggagcagaacaaacagagcatcatcacactgcagaaggagaaagagctgctg
acgcaagagctggcggcattgtaa
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integrated database retrieval system