Danio rerio (zebrafish): 100538330
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Entry
100538330 CDS
T01004
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
100538330 (rbfox3a)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100538330 (rbfox3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100538330
NCBI-ProteinID:
XP_021336046
ZFIN:
ZDB-GENE-111213-1
Ensembl:
ENSDARG00000010083
UniProt:
A0A8M9QJ91
LinkDB
All DBs
Position
12:32501498..33248209
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AA seq
429 aa
AA seq
DB search
MVPQTRFIGQSDLPRSDCPLLPTESDTSVVAVRPQQAQPQLYMETPSWAETKPGNGLCKT
GSIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQEAPAPPEAMAQPYAPAQYPPPPPQNGL
PGEYTHPGQDYTGPSPVPEHAAALTIYTPTQTHSEPPGTDSSTPSLTGTSSLTQADDVVQ
TDGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPYTNGWKLNPVVG
AVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYNTFRAAPPPPPIPAYGAVVYQDG
FYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATADPYHHTIGPAATYSVGTMASLYR
GGYSRFTPY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggttccacaaaccaggttcatcggacagagtgacttgccacgctccgactgccccctt
ctccccacagaatcagacacttctgtggttgcagtaagaccccaacaagctcagccacag
ctgtacatggagacccccagctgggcagaaaccaaaccaggaaacgggctgtgtaaaaca
ggaagcattgctctctttggaaacgtagtgtacagcgggctgctgaacgatcacttttgg
catttcggggttccccttgtcacaagactgggtaaccaggaggccccagctcccccagaa
gccatggctcagccgtacgccccagctcagtatcctcctcctccacctcaaaacgggctg
cctggcgaatacacccaccctgggcaggactacacagggcccagtccggtccctgagcat
gcggcggccctcaccatctacacaccaacacagacacacagcgagccgcctggcaccgac
agcagcacaccatccctcacagggaccagcagcttaacacaggcggacgatgtggtacag
acagacggatctcagcagcttcagctccagccatcagactcttcggagaagcagcagccc
aaacggttacacgtctccaacattcccttccgcttccgagacccagacctccggcaaatg
ttcgggcaatttgggaaaattttggatgtggaaattatttttaacgagcgaggctctaag
ggttttggttttgtaacttttgaaacaagtgcagatgcagaccgtgcacgggagaaatta
aacggtacaatcgtagagggacgcaaaattgaggtaaataatgcaacggcacgagtaatg
acaaacaaaaaagtggccaacccctatacaaatggctggaagctgaatccagtggtggga
gctgtctatggtcctgaattttatgcagtgacaggcttcccctatccaaccacaggggcg
acggtggcttacaggggcgcccacttgagaggcagaggtcgtgccgtctacaatacgttc
cgtgctgcgcctccaccccctcccattcccgcctacggagctgtggtttaccaagatggc
ttctacggtgctgagatctatggtggctatgcagcatacagatatgcccaaccagccgca
gcagccgcagccgcctacagtgacagctatggcagagtctatgcaacagcagacccttat
caccacacgattggacctgcagccacgtacagcgtgggcactatggctagcctttacaga
ggaggttacagtcgcttcacaccctactaa
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