Danio rerio (zebrafish): 321707 Help Entry 321707            CDS       T01004                                  Symbol atn1 Name (RefSeq) atrophin-1 isoform X1 Organism dre  Danio rerio (zebrafish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Atrophin-1 Motif Other DBs NCBI-GeneID:  321707 NCBI-ProteinID:  XP_005158246 ZFIN:  ZDB-GENE-030131-426 Ensembl:  ENSDARG00000092067 UniProt:  F6PDP0 LinkDB All DBs Position 16:31846384..31868912 Genome browser AA seq 1666 aa AA seqDB search MKTRTHKESMPARSGRRRGGSEERRGRRPHPSPSRAERNERQTQRTAGEELSVGRFNRRS QGHDSSESEGEEHLPPPKRQKVQDSSNPSAPPISTNTPTSAPPPASSNSQSRESDNEDGQ SQGSRSSVVGSLANSSSSISSGRDIDQDNRSSSPSLSASPLASLDSESDSPDSPKQGDKN KDGGGSKCVAEERRGSGRSEDSRPEDQKDSEGGIEGDLSPLKSSASHYTSHHGMVDNTND PSSNRKSYFPLDSKVASKLEYTSPGGPEVIHTSSRIPSKTSTQCGKPGVGGAEYSHGNSN VSHASPLPPPPALKPLEVGQNAPSGDSKADKPEKGDKSAPPSLLPQTSTIPQQPPPPNTH HYTPTSWSGGPPTNCPGNWGYVRYPGNHHTHPSQQPPVQQQLPSVYNTTSSTRHSSHPPY LSHPHPHPHKEFLPRYGTTAERERAGREFGNRDFPASNSSSNANSSSGSICGSTSGGGGP NSNVSRDFGTSIPGQSRDYASNRDGPSGPQSGREYAPGFRDRERGTGREFPLPNQQLQAQ GREFVPENTGGGGCHSRDKENRWGELSSQVRESGSNNYAGNPNQAPVGAQSSALPSATLA NRDPTSSPQNSTSHPSFSTANSIPPNRDYSSPMDANVQGQTPQASSNSADLPPPPHYLRE YPPPGAKDPYPPPGSSSSSVPLSGVQREFPSPPGLAPNLTREYPGGPLPHHSHYPGQTGL PMQHRDREREKDSTASSLHSNRNHPPSLSPSSSGSGTGHGHPTSSTYPPPLPPPSTSSHG QPPPIASLPGNHARQGPYSSSNQTPPTPLSPLPSPSNNPIGGFTFPLTSAPSVPLPASGV STSCPSGCRPTPYHGTLSSHTPFSSSYHGNGNHGNSNASGNAPNNSNSTSTPSLLHSPQN NKVQPHIGNAGHNNSTSTSSTSLGGDGHPDSSSGPVPPTVIKEEPVEEREELESPPPVLR SPSPEPKPVDIPIHASQSARFHRVLDRGSGNSCARSDVLFVPLDGSKLWKKRNEAIERAR REVEQRARDLREKEREREREKERERDLDRHLQQKDSGTSAGLGAAGARQGSSLFFPSSSS ILLDPSSSSSSSVNPSHPAVHPQHHPAHHAAHPHHIHPSHLHPSLSHSIPHSLLLPSMAG GSPVVGGPQGALGIGLGGPYLGPDTPALRTLSEYARPHAMSPLSAAARAQAHHPHLHHHP HPHMHAHAQAHPHVHPSFFLSQFQNPALAHPHHLPADAATAAAILGFLYGGGLEGGPVHP GPGPGPGGLAGAGLGGMGFPHAVAAQRERVKPGFEFKSEERVYTAGALADPAIALSHAHS HAHSHSLLLGGGAGGGPPVSEVALYGTTPPPAPPPQALAAAARNPNPVPPPLSVPPTSSI LPATLPTHQAPAGAPVTPAASAPPPQPPPPPPPPPPPTASSLHHPSPHSTFPTTHPSCQP PPLPAQAPPSERYPTPVRTPPSTERARSVERERERERVIPAAERERERDRERAGTGGGAA GGGTTAGGGGGTGGGDSLSRLQMLNVTPHHHQHSHIHSHLHLHQQDTAAGGVHPLMDPLA SGSPLARLPYPGAALGPPILAHSLTDSEVLRQQLFGGPFREMPQSSSLGGSMSAAHQLQA MQQAQSAEIQFQRLALEQQWIHHHHHHSLTQDEYYSHLKKESDKTL NT seq 5001 nt NT seq  +upstreamnt  +downstreamnt atgaagacccgaacccacaaagaatcgatgcccgctcgaagtggacgtaggagggggggc agcgaggaaaggaggggtagacgtccgcaccccagcccctctcgagcagagcgcaatgaa aggcaaacacaaagaaccgctggagaggaactctctgttggacgcttcaaccgacgatct caaggtcatgattcatcagaaagtgaaggggaggagcatctgccaccacctaaaagacag aaagtccaggattcctccaatccctcagcaccacctatttcaactaacactccgacttca gctccacctccagcatcaagcaacagtcaatcaagagaaagtgacaatgaggatggtcaa tcacaaggaagtcggagctcagtagttggcagtttagccaatagtagcagtagcataagc agtggtcgggatattgatcaggacaatcgatcctcctctccaagtctttctgcttccccc ttggctagtttggattctgaatctgactctccagattcccctaaacagggtgacaaaaac aaagatggagggggatcaaagtgtgtagcagaagagcggagaggttcaggaaggagtgag gatagcagaccagaggaccagaaggacagtgaaggaggaatcgagggagatttgtctccc ttgaagtcctcagcatcccactatacatctcatcatggaatggtggacaatactaatgat ccaagtagcaacaggaagtcatacttccccctggattccaaagttgcaagcaagctagag tatacaagtcctggtggtcctgaggtgatacacaccagcagtcgcatcccttctaaaaca agcactcagtgtgggaaacctggggtgggtggagctgaatattcccatgggaattcaaat gtgagccacgcatcaccacttccacctccacctgccctgaaacctctagaggtagggcag aatgctccaagtggagacagtaaagcagacaaaccagagaaaggtgataagtctgctcca ccttccttgcttccgcaaactagtaccattccccagcagcctcctcctcccaacactcat cattacacccccaccagctggtcagggggacctcccactaattgtcctggcaactgggga tatgtacgttacccaggtaaccaccacacacatccaagccagcagcccccagtacagcaa cagctaccatcagtgtacaatactacttcatccactcgacactcttcccacccaccttac ctttctcaccctcatccacatccacacaaagagtttctgcccaggtatggcactacagct gagcgagagagggcagggagggagtttggtaacagagacttccctgctagtaatagcagt agcaatgcaaacagtagcagtggtagcatctgtggtagcacttctggtggtggtggaccc aactccaatgtgagccgagattttgggacctctatacctggacaaagcagagactatgcc tcaaaccgggatggaccttcaggaccacagagtggtcgggaatatgcaccagggtttaga gatcgtgaacgagggactggtagagaatttcctttgccaaaccagcaacttcaagcacag ggcagagagtttgtacctgaaaatactggagggggaggatgtcattcaagagacaaggaa aataggtggggagaattatcaagccaggttagggagtcggggagtaacaattatgctggt aatcccaaccaagcacctgttggtgcccagtcatctgcgctaccttcagccaccctggcg aatcgtgacccaaccagttcaccacagaacagtactagtcatccttctttttccactgca aattccatccctccaaacagagactattcctctcctatggatgcaaatgtgcaaggacag actccccaagcatcgtccaattctgcagaccttcctccccctccacactatttaagagag tacccccctcctggagcaaaggatccctatccccctcctggatcatcctcttcatctgtc ccactttctggtgtgcagagggagttcccaagcccacctggattggccccaaaccttact cgagagtatcctggaggaccacttcctcatcactctcactatcctggccagacagggttg cctatgcagcatagagacagagagcgtgaaaaggacagcacagcatcttctcttcattca aatcgtaatcatcccccatctctttctccttcatcaagtggctctggcactggacatgga caccccacatcttctacctatccccctccccttcctccaccctcaactagttcacatggt cagcctccacccattgcatcccttccaggcaatcatgctcgacaaggcccatattcttca tctaatcagactccaccaactccactctcgccactgcccagtccctcaaacaatccgata ggaggtttcacttttccattaacctctgctccttctgtaccacttcccgcatcaggtgtg tccacctcttgtccatcaggttgcagacctactccttaccatggcactttaagcagtcat actccattcagtagctcttaccatggcaacggaaaccatggaaatagcaatgccagtggc aatgctcccaacaacagcaatagcactagcactccatcactactgcactcccctcaaaac aataaagtacaaccacatattggtaacgctggccataacaacagtacttcaacctccagc acatctcttggaggagatggtcaccctgattcatcttctggcccagtgccaccaactgtc atcaaagaggagccagtagaggagagggaagaattagagagcccacctccagttctccga agtccttccccagagccaaaacctgttgacattccaatccatgctagccaatcagctcgg tttcacagggttcttgacagaggaagtgggaactcttgcgcccgtagtgatgttctgttt gttccacttgatggttctaaactttggaagaaaagaaacgaagccatagaacgtgcacgt agagaagttgaacaacgagcaagagacctgcgagagaaagagcgggaacgagagagagaa aaggagagagaaagagacctggacagacatctgcagcagaaggacagtggcacaagtgct ggtttaggagctgcaggagcacgccagggttcttcgctcttctttccttcctcctcctcc atccttctagacccttcatcttcttcatcgtcctctgtgaacccatcccacccagcagtt catccacagcaccaccctgcccaccatgccgcccacccccaccacattcacccttctcat ctacatccctctctttctcactccattcctcattctcttctcctcccttccatggcaggg ggctctccagttgttggaggccctcagggtgctcttggcattgggcttggaggtccatac ttgggccctgataccccagccctcagaaccctgagtgagtatgcccgtcctcatgccatg tccccactaagtgctgccgcccgggcacaggcacaccatccacaccttcaccaccaccct cacccacacatgcatgcacacgctcaagcccacccccatgtgcatccttcatttttcctg tctcaatttcaaaacccagcacttgcacacccccaccaccttcctgccgatgctgccacg gctgctgccattctgggctttttgtatgggggtgggctagagggaggccctgtccatcca gggcctggtcctgggcctggggggttggctggggcggggcttggaggaatgggattccct catgctgtcgcagctcaaagagagcgtgtaaagccaggatttgagtttaagagcgaggag cgtgtctacacagctggagccttagctgacccggcaatagctttgtcacacgcacactcg cacgcacactcacactccttgctgctagggggcggagccggaggcggacctcctgttagt gaggttgccctttatggtacaactccacctcctgctccaccccctcaagctttagccgca gcagctaggaatccgaatcctgttcctccacctctttcagtcccacccacatcctcgatt cttccagccacactccctacccaccaggctcctgctggagcaccagtgacgccagcagcc tctgcacctccccctcaacctcctccccctccacctcctcctcctcctccaacagcctca tctcttcatcacccctctccacactccacctttcccaccacacacccttcttgccagccc ccacccctcccagctcaggctccgccctctgagcgatatcccacccccgttcgcactcct cccagcaccgaacgggcacggagtgtggaaagggagcgggaaagagagagagtcatccct gctgcagagagggagcgagagagggatagggagagggctgggacaggtggaggagcagca ggaggaggcacgacggctggaggaggaggaggcacaggaggtggagattctctcagccgg ctacagatgctgaacgtgactcctcatcatcaccagcactcacacattcactctcaccta catctgcaccagcaggacacagccgcgggaggggtacaccccctgatggatccgctggca tcagggtctcccctggcccgtctgccgtacccaggggctgctcttgggcctcccatcctg gcacactccctcactgacagcgaggtgcttcgacagcagctctttggtggtcctttccgt gaaatgccccagtcctcgtctctgggtggctccatgtccgcagcgcaccagctccaggcg atgcagcaggctcagagtgccgagattcagtttcagagactcgccctggaacagcagtgg atccaccaccatcatcatcactccctcacgcaggacgagtactacagccacctaaagaaa gagagtgataaaacgctgtga

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