Danio rerio (zebrafish): 321948
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Entry
321948 CDS
T01004
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
321948 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
321948 (ddx46)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
321948 (ddx46)
Spliceosome [BR:
dre03041
]
Complex A
U2 snRNP components
U2 related factors
321948 (ddx46)
Complex B
321948 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
321948
NCBI-ProteinID:
NP_001019988
ZFIN:
ZDB-GENE-030131-667
Ensembl:
ENSDARG00000099458
UniProt:
Q4TVV3
LinkDB
All DBs
Position
21:45717830..45732179
Genome browser
AA seq
1018 aa
AA seq
DB search
MGRESRHYRKRSSSRGRSGSLSKSRSPDSKRSKKDDRTASRTHSRRERSRSRERRRSRER
KRQRRSSRDRRRSRSRERRRSKSRSRGRSKEKPENGDQTADKKKIKEEKEEEKPEDQDFD
QNTLEEEMRKRKERVEKWREEQRKTAMENIGEIKKELEEMKQGKKWSLEDDDEEQDKAAE
AEESERMEEEEVGEEVDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTK
KMPHATKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFR
KNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNY
EKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMT
PTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGA
NNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALAR
RILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHA
DGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVV
NYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQL
WTNFKEQQKAEGKIIKSSSGFSGKGFKFDETEHALANERKKLQKWALGLHDSDDEDTALD
IDEQIESMFNSKKRVKDFSAPGSVSAGSAGGVSGSVSAVSGLGSLSTPSAGNIQKLEIAK
KLALRIQAQKNLGAEAQDVMQQATNAILRGGTIIAPSVSAKTIAEQQAEKINAKLNYTPV
EKLEEERQAAEAAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYF
PPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagagtcacggcactacaggaagcgctccagctccaggggcaggtcgggcagc
ctttctaagagccgctctccagactcgaagcgctctaagaaagacgaccgcaccgcttcc
agaacacacagcagacgagagagatcccgcagcagagagagacgcagatccagagaacgc
aagagacagaggcggtccagtcgagaccggagacgctcacgcagtcgagaacgcaggagg
agtaagagcaggagcagaggcaggagcaaggagaagccggagaatggagatcagacggct
gacaagaagaagatcaaggaggagaaggaggaggagaagcctgaagatcaggactttgat
cagaacacgctggaggaggagatgaggaagaggaaggagcgtgtggagaagtggagagag
gagcagaggaagacggccatggagaacatcggggagatcaagaaggagctggaggagatg
aagcagggcaagaagtggagtctggaggacgatgacgaggagcaggataaagcagcagaa
gcagaagagtccgagcgtatggaggaggaggaggtcggagaggaggtggacccgctggac
gcctacatggaggaggtcaaggaggaggtcaagaagttcaacatgggcactatgaaggga
gcaaacgacaagaaaggagggatgtctgtgaccaaagtggtgacggtggtgaagaccaag
aagatgccgcacgccaccaagaagaagggggagctgatggagaacgaccaggacgccatg
gagtattcgtcagaggaagaggaagtggacctccagacggcgctcacaggcttccagacg
aagcagaggaaggttctggagccggtggatcaccagaagatccagtacgagcccttcagg
aaaaacttctatgtggaggtgccggagctggcccgcatgagccctgaagaggtgagcgag
taccgtctggagctggagggaatcagtgttaaaggaaaaggctgtccgaagcccatcaag
acctgggtgcagtgtgggatatccatgaaagtgctgaacgcgctgaagaaacacaactac
gagaagccgacgccgatccaagcgcaggccataccggccatcatgtcaggacgagacctc
atcggcatcgccaaaacaggaagcggaaagaccatcgccttcctgttgcccatgtttcgg
cacatattagaccagcggccggtgggagaggctgaaggacccctcgcggtgatcatgacc
ccgacgcgagagctcgctctgcagatcactaaagagtgtaagaagttctccaagagtctg
gctctgcgggtggtctgtgtgtatggcggcaccggcatcagtgagcagattgcagagctg
aagcgtggagcggagatcatcgtctgcactcccggccggatgattgacatgctgggagcc
aacaatggtcgggtcactaatctgcgcagggttacatatgtggtgatcgacgaggctgac
cgaatgttcgacatgggcttcgagccgcaggtgatgcgtatcgtggataacgtgcgaccc
gaccgtcagaccgtcatgttctccgccacgttcccccgcaccatggaggctctggcccgc
aggatcctgtccaaacctgtggaggtgcaggtgggcggacggagcgtggtgtgttcagat
gtggagcagcatgtgattgtgatcgaggaggagaagaagttcctgaagctgctggagatt
ctgggccactatcaggagaagggctccgtcatcatcttcgtggacaagcaggagcacgcg
gacggcctgctgaaagacctgatgaaggcctcgtacccctgcatgtctctgcatggaggc
attgaccagtatgacagagacagcatcatcaatgactttaagaacggggcctgtcggctg
ctggtggccacgtcggtggcggcgcgaggtcttgacgtcaagcagctgatcctggtggtg
aactacagctgccccaaccactatgaggactacgtgcaccgcgcaggacgcaccgggcga
gccggaaacaagggttatgcctacaccttcatcacagagggccaggcccgatactctgga
gatatcctgaaggctctggagctgtcgggatcgtccgtccccgcggagctcgagcagctc
tggacaaactttaaagagcagcagaaagcagaggggaagatcatcaagagcagcagtggg
ttctctgggaaaggctttaagtttgacgagactgagcatgctctggccaacgagaggaag
aagctgcagaagtgggcgctcggcttgcacgactctgatgatgaggacactgcgctcgac
atcgatgagcagatcgagagcatgtttaactctaagaagcgggtgaaggatttctcggct
ccgggctccgtgtctgcggggtctgcaggtggtgtgagcggctccgtgtctgcagtgtcc
ggcctgggcagtctgagcactccgtctgccggaaacatccagaagctggagatcgccaag
aagctggcgctcaggatacaggcgcagaagaacctcggtgcagaggcgcaggatgtgatg
cagcaggccacgaatgccattctgcgcggcggtaccataatcgctccttcagtttcggct
aaaaccatcgcggagcagcaggcggagaaaatcaacgccaagctgaactacacaccggtg
gagaagctggaggaggagagacaggcggcggaggctgcagagaccgtcaagagatacgaa
gaggagctggagatcaacgacttcccacagacggcgaggtggaaggtcacgtctaaagaa
gctctgcagcgaatcggcgagtattcagaggccgctatcactatacgaggaacatacttc
cctccaggaaaagagcccaaagagggagaacgcaagatttatctggccatcgagagtgcg
aatgaattggctgttcagaaggcgaaggcagaaatcacacggctcatcaaagaggagctc
atccgcctgcaaaactcttaccagccgaccagcaaaggccgatacaaggtcctgtag
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integrated database retrieval system
