KEGG   Danio rerio (zebrafish): 326643
Entry
326643            CDS       T01004                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    326643 (kdm3b)
Enzymes [BR:dre01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     326643 (kdm3b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    326643 (kdm3b)
SSDB
Motif
Pfam: JmjC RGCC PWWP Cupin_2 C1_2
Other DBs
NCBI-GeneID: 326643
NCBI-ProteinID: XP_005173195
ZFIN: ZDB-GENE-101007-4
Ensembl: ENSDARG00000062267
UniProt: A0A8M2BKX2
LinkDB
Position
14:complement(21622876..21660599)
AA seq 1824 aa
MGDSLGLIGKRLLLLLNDGSSAPAATGGEVERAAWLRGTVRAVSVIGLASPGVEVFVEFE
DSPWRKRAWVQLYGDEVRVVLMESAIVWANCSDPSLSTALGSSATQWPALMFKQLIDRVG
LGSVVPVEFFGARNLAFLPNGNSLHTFETEKDFTHSLLQEQPALQHAISSWHTDSELQEI
LRKGSYTIQGRRVKVYQPEFEQPWAFGLVSQHDPVSHIMEITMDQSCLKGEETQVVDPRV
IHVMLAEGKLNESQDRRKKEGDGGKGEGSRRRRTASEGDEDITLKRFKGAGEGASDNQNG
NSSNRDAEAMVTCVEMPGKGVVEGKDEAGGLGGRVTSTCSPVALSSQDSSNNSNSSQQEH
SHIRSTGFVKENGSFIPNQERISSVSAVLPASTPTPPPLKPAPSPFSNTFPSLGQMPNLV
PGAPAPKSSPTLPSSEREEGGVLSGYPKTAALVSPGPVTISSPSQENTSSVALTAPVDAN
QKPSMWGSTSEGNQTPKAPVLAPAGFGKQSSGGVFGNVSTQTNGSSQGDKPFGFSFRGAK
DSQRQDSDTSQNLFFQFISQNQSNTQGQSKAFTSLSECLNKEPPSLFKSAAPSEGFKKTV
VASASTGLFGSAPASGLAPLKEQPKVPDIKPAGNGILMNKPFGAVGEAQSKLPATFSSAI
IQAASSTEVLKPSGLGTSGLGNASGGIRNVNSSTPVSSFGLLAGNKVSDGHENLFLQPSK
ETNSFLAYGRGVPQTPFGALTSPKSSSAQSASAVSPSGSTSLLGQDPPGSDAKPNLFTMA
EPPKGILAPQFAAPALMTTPSFTSVAQDGQQISKPNREGSDDSSGTLLSTEAEGVSVPFE
QSKFSLEERLQSIKKDSESSSNSDLSDLSEGEDNAGQSQKPDLPAGNEDKNKAQAAAKSR
PRSKPFKVGQSVLKDQNKVRRLKQSGEAFLQDGSCINVAPHLHKCRECRLERYRKSREQD
SDDDDPNVACRFFHFRRLAFTKKGVLRVEGFLSPQQSDSMAMGLWLPSITIQEGLDLDTS
KYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRK
CGFGVCLDCYRLRKNRPPEVEDGPEEEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIG
DMVHAARGKWGIKANCPCTSRHKTLMRPSAPNGLSQSGAAHSSGNGTTSTSSTTRPNEES
AAGVVVKTEPVEEPTSADTTSSTSGTNSSTSSPAPAPTSAPTLLPPSLPPPSLPPPSLPP
APALVPTPPAKDSKSSSSALHWLADLATQKEPKESLRSMMGRDSRSPFGLDSFSTLSKPS
GSSPKLFNSLLLGAGPSQPKAEGTSLRDLLNSGSGKLPQGPTEGGVPFPPVFSTASQADK
MKGGLPNFLDHIIASVVETKKSEVRRASGSAEVIESATAPRREGVMGLSVLDPHTSHSWL
CDGRLLCLQDPSNPNNWKIFRECWKQGQPVLVSGIHRKLKEHLWRPEAFSEEFGDQDVDL
VNCRNCAIISDVKVREFWDGFQVISKRLQGSDGQPMVLKLKDWPPGEDFRDMMPTRFNDL
MDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGLISTEDRKVGTTNLHLDVSD
AVNVMVYVGIPEGENDQESEADLAGFKEVMQTIEEGDVDDMTKRRVYEIKEKPGALWHIY
AAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRRRLYEEYGVQGWSIVQFL
GDAVFIPAGAPHQVHNLYSCIKAAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVK
NIIYHAVKDAVATLKAHEPKLGRS
NT seq 5475 nt   +upstreamnt  +downstreamnt
atgggggactcgctcggtctgatcgggaagcggctgctgttgctgctcaatgacgggagc
tcggcgcctgcagcgacgggcggagaggtggagcgggcggcctggctccgagggaccgta
cgggcggtcagtgtgatcgggctggcgagcccgggggtggaggtgtttgtagaatttgag
gacagcccttggcgtaagcgtgcatgggtgcagttgtatggggatgaggtgcgtgttgtt
ctcatggagagtgccatcgtttgggcaaactgcagcgatccttctctctccactgctcta
ggatcatctgctacacagtggcctgccttgatgttcaaacagctgattgaccgtgtgggt
ttggggtccgtggtccctgttgagttctttggtgcaagaaatttggcgtttctccctaat
gggaattcgctgcacacttttgagactgaaaaagattttacacactctctgcttcaagag
cagccggcacttcaacatgccatttcaagctggcatacagactctgagttgcaggagatt
ttgcggaaaggatcttacactattcagggtcggagagtaaaggtgtaccagccagagttt
gagcagccctgggcctttggactagtatctcagcatgatcctgtttcacacattatggag
attaccatggatcagagttgtttaaaaggtgaggagacacaagtggttgatcctcgggtt
attcacgtaatgcttgctgaaggcaagttaaatgagagccaagatcgacgcaaaaaggag
ggtgatggtgggaaaggtgagggcagtcgaagacgtcggacagcatctgaaggagatgaa
gacattacactcaaacgtttcaaaggagccggggaaggtgcctctgacaaccagaatggg
aatagctccaacagggacgcagaggctatggtaacatgcgtagagatgccgggaaaggga
gtagtggagggaaaagacgaagcgggtggtttgggtgggagggtgacgagcacctgtagt
ccagtagctttatcaagtcaagactcctctaacaacagcaattcctctcagcaggaacac
tcccatataaggagcacaggttttgtgaaggagaatggcagttttatcccaaaccaagaa
aggatttcttcagtatctgcagtgcttcctgcttctactccaacgccacctcctttgaag
cctgccccatcacctttttctaacacttttccttctttgggtcaaatgcccaacttggtg
cccggggcccctgccccgaaatcatctcccacactcccatcgtcagagagggaggaggga
ggtgttctttcagggtatcctaaaacagctgccctggtgtctccaggtcctgtgaccatt
tcatcaccttcccaagaaaacacttcaagtgtggctctcactgctcctgttgatgcgaac
caaaagcccagtatgtggggatcaacctcagaaggaaatcagacccctaaagcccctgtt
ctagctcctgctggatttggtaaacagtccagtggaggggtgtttgggaatgtctcaaca
cagactaatggatcttcccagggggacaaaccctttgggttttcatttagaggtgcaaag
gactcgcaaaggcaggactctgatacgtcacagaacctgttcttccaattcatctctcag
aaccagagcaacacacaaggccaatcaaaagccttcacatctttgtccgagtgcctgaac
aaggagccgcccagcctgttcaagtctgctgctccctctgagggtttcaaaaaaactgtt
gtggcttctgcatccactggactgtttggttcagcacctgccagtggcctggcaccactg
aaagagcagccaaaagtgcctgatatcaagcctgcaggcaatgggatccttatgaacaag
ccttttggtgctgtaggggaggcacagagcaaactcccagccactttttcttctgccata
attcaagctgcaagctctacagaggtgctgaaaccctcgggattaggaaccagtggactt
ggaaatgccagtggtggaattagaaatgtaaatagctcaaccccagtgagtagctttggt
ctgcttgctggcaacaaggtttccgatggacacgagaacctgttcttgcagccctcgaag
gagacaaattcgtttcttgcctatggcagaggtgttccgcaaaccccttttggtgcattg
acatctccaaagtcttcatctgcccagtccgcatctgctgtttcaccttcaggcagcacc
agtctgctcggtcaagatcctcctggtagtgatgcaaaaccaaatctcttcactatggca
gaacctcccaagggaatcttagcccctcagtttgcagctcctgctctcatgaccactccg
tcattcacatcagttgcacaggatggacagcaaatatccaaaccaaacagagaaggatca
gatgacagctctggaacccttctcagcactgaagcagaaggtgtctctgtgccctttgag
caaagcaagttttcattggaggaacgtcttcagtctatcaaaaaggattcagagtccagt
agtaacagtgacttgtctgatttgagtgagggagaggacaacgctggccagagccagaaa
cccgatcttccggcaggcaatgaggataagaacaaggcccaggctgcagccaagagccgg
ccacggagcaaaccatttaaagttggacagtctgtgttgaaggaccagaataaggtacgg
cgcttgaagcagtctggagaggcctttctacaagatggctcctgcattaacgtggctccc
cacttgcacaaatgtcgtgagtgccgtctggagcgctacaggaaatcgcgtgagcaggac
tctgatgatgacgacccaaatgtagcctgtcgattctttcactttcgcaggttggctttc
actaaaaagggagttcttcgtgtggagggttttctgagcccacagcagagtgacagcatg
gcaatgggcctgtggcttccttccatcacaatacaagaaggacttgacctggacacgtcc
aaatatattttagcaaatgtgggggaccagttttgccaattggtcatgtcagagaaagaa
gccatgatgatggtagaaccacatcaaaaagtggcttggaagcgagctgtccgaggagtg
agagaaatgtgtgatgtttgtgaaacaaccctgttcaacatccactgggtttgtcgtaaa
tgtggcttcggcgtttgtcttgactgctatcgactacgcaagaacaggccacctgaagtg
gaagatggtcctgaagaggaggtgttctcatggctaaagtgtgctaaaggccagccacac
gaaccacagaacctcatgcctactcaaattatacccggcacggcattgtacagcataggt
gacatggtacatgcagccagaggtaaatgggggattaaagcaaactgtccctgcactagt
cggcacaaaacgttgatgcggcccagtgctccaaatggtctttcacagtcgggtgcagct
cacagttcggggaatggaaccacgtctacttcatccacaacccgtccaaatgaagaatct
gcagctggtgttgtagtcaaaactgaacccgttgaagagcctacaagtgctgataccaca
tcaagtaccagtgggacaaatagcagcacatctagccctgctcctgctccaacttctgct
cctactcttcttcctccttctcttcctcctccttcacttcctcctccttcacttcctcct
gctcctgcacttgtacctacacctcctgcaaaggatagcaagagcagttcttcagcactt
cactggctggcagatctggccacacaaaaggagcccaaagagtctctgcgctccatgatg
ggtcgtgactctcgttctccatttggcctggactcgttcagcacactttccaaaccatca
gggtccagtcctaagctgttcaacagtctgctgctgggtgcaggcccttcacaacccaaa
gcagagggaaccagcctccgagatctgctgaactctggctctggcaaactcccgcaaggg
cccacagagggaggtgtcccatttcctccagtgttctccactgctagtcaggctgataaa
atgaagggaggtcttcctaacttcctggatcatatcattgcatcagtagtggagactaag
aagtcagaggttcgtcgtgcatcaggttcagcagaagtcatcgagtctgccactgctcct
cgcagagagggggtgatggggctgagtgtcctggatccacacacttcacactcttggctt
tgtgacggccgtttgctctgcctgcaggaccccagtaaccccaacaactggaagatcttc
agagagtgctggaaacaaggacagcctgtgctggtctcaggcatacacaggaagctgaag
gaacacttatggaggcctgaggccttcagcgaggagtttggagaccaggacgtggacctg
gtcaactgtaggaactgcgccatcatctctgatgttaaagtcagggaattttgggatggc
ttccaggtcatttccaagcgattgcaaggtagtgatggccagcctatggtactaaaactt
aaagactggcctcctggagaagattttcgagatatgatgcccactcggtttaatgatctc
atggacaatcttcctttgcccgagtacacaaagagagatggccgtctcaacctggcctct
cgtcttccaaacttctttgttcggccagatctgggccctaaaatgtacaatgcgtatggt
ctgatctccacagaagacaggaaggtcggcaccactaacttgcatttggatgtgtctgat
gccgtcaacgttatggtgtatgtgggcatcccagaaggagagaatgaccaagaaagtgaa
gcagacctcgctggattcaaagaggtgatgcagactattgaagagggtgatgtagatgac
atgacgaaaagaagagtctacgagatcaaggagaaacctggggctctctggcacatctat
gctgccaaagacgctgagaagatccgagagctcttacgaaaggttggagaggaacaaggt
caagagaacccaccagaccatgatcctatccatgaccagagctggtacctggaccagacg
ttgcgtcgcaggctgtatgaggagtatggagtccagggatggtccattgtgcagtttttg
ggagatgcagtgttcatcccagctggagcaccacatcaggtgcacaacctgtacagctgt
atcaaagctgcagaagattttgtttctccagagcatgtgaagcactgttttagactgacg
caagagtttcgccacctttccaacactcacacaaaccacgaggacaagctacaggtgaag
aacatcatctaccatgctgtgaaggatgctgtggcaacactaaaagcccatgagcccaaa
ttaggccgttcttag

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