Danio rerio (zebrafish): 334130
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Entry
334130 CDS
T01004
Symbol
lrrc40
Name
(RefSeq) leucine-rich repeat-containing protein 40
Organism
dre
Danio rerio (zebrafish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
334130
NCBI-ProteinID:
NP_956156
ZFIN:
ZDB-GENE-030131-6062
Ensembl:
ENSDARG00000017708
UniProt:
Q7SXW3
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Position
6:30113786..30122554
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AA seq
601 aa
AA seq
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MSRFKRGAHVDSRAGFRQEKEDCPVPYGLLKAARKSGQLNLSGRGLTEVPASVWRLNLDT
PQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPD
SIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLS
NNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQM
ESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVK
SLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGEL
LKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDA
VDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRN
NLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTL
SRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSRIP
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttaaaagaggagcacacgtggactccagagcaggattcagacaagagaag
gaagactgtcctgttccgtatggcttactgaaagctgctagaaagagcgggcagctcaat
ctgtccgggcgcggtctaaccgaagttcctgctagtgtatggaggttgaacttagacaca
cctcaggaagccaagcaaaatgtgtcttttggagctgaagatcggtggtgggaacagact
gatctgaccaaactgcttctgtcctccaacaaactccagagcatccctgatgatgttaaa
cttctgcctgccctggtggtccttgatatccatgacaatcagcttagctcgctgccagat
tctattggagatctagagcagctacagaagctgatattgagtcacaataaactgacagaa
ttgccttcgggtgtctggagactcacaaacctgcgatgtctccatctgcaacagaatctc
attgaacagattcctcgagatctagggcagctggttaacttggatgaccttgatctttcc
aacaatcatctaatagatattccagaaagccttgcaaacctccaaaatcttgtgaagttg
gatttgtcctgcaacaagctcaagagtcttcctcctgccatcagtcaaatgaaaaacctg
agaatgctggactgttcccgaaaccagatggagagcattcctcctgtcctggctcagatg
gagtcccttgaacagctttacttgagacacaacaagctacgctatttgcctgaactgccc
tgctgtaaaacactgaaggaacttcattgtggaaataaccagattgaggtattggaggca
gagcatctgaagcacctgaacgctctgagtttgctggagctcagagataataaggtgaag
agccttcctgaggaaataaccctactgcaaggcctggagcgcctggatcttactaacaat
gacatcagcagtctgccgtgtggacttggcacattacccaaactgaagtctttgtccttg
gaaggcaacccactgagggcaatccgcagagatctcctgactaaaggcactggtgaactc
ctaaaatatctcagaagtcgtgtacaagagccacctaatggaggcttgaaagaagagcca
aaaacagcaatgactttccaaagtcaagctaaaattaatatacatgccattaaaacgctg
aaaacactggactacagtgaaaaacaagacgcatcgattccggatgatgtgttggacgca
gttgatggtaatcctgtggccaatgtgaactttagcaaaaatcagctgacggctgttcca
cacagaattgtggatttaaaggacactctggcagacattaatcttgggtttaacaagcta
acgaccattccggcggacttttgtcatttgaaacagctgatgcatatagatctcaggaac
aatctactgatctcactgccaatggagctggaaggcttaatcaaactgcggagtgttatt
ttgtcttttaataggtttaagtcattcccagaagtgctgtaccgaatcccatccctagaa
accattttaatcagcagcaatcaagttggaggcattgatgctgtccaaatgaagacctta
agtaggctgtcaaccctggatctgtccaacaatgacatcatgcaagtgccaccagaactc
ggcaactgtaccagtctgagggctctaatgcttgatgggaatcctttccgtaatccaaga
gctgccatccttattaaaggcacagatgctgtccttgagtatctccgaagtcgtattcca
acatga
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