Danio rerio (zebrafish): 334839
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Entry
334839 CDS
T01004
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
dre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
334839 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
334839 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
334839 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
dre03400
]
334839 (gtf2h4)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
334839 (gtf2h4)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
334839 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
334839
NCBI-ProteinID:
NP_956221
ZFIN:
ZDB-GENE-030131-6779
Ensembl:
ENSDARG00000036071
UniProt:
Q6P2T8
LinkDB
All DBs
Position
19:complement(27316467..27334330)
Genome browser
AA seq
466 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELTPEILDRLYNHPATCLAVYRELPPLAKNYVMRMLFLDHPLP
QAAVALWVKKGSQKDHDQCVSVLTGLRLWHSQHLQGGLQGFVLNPVFKDNLRIALLGGGK
PWADEGANLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
ETGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTANPASGSASSALG
AIPGTGDTGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNLVVAQVTRESVQQAIS
NGITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELEKDRLQFTEGVLYNQFLSQA
DFEVLRDRAQGLGVLVWQNPAHRVMVVTPHGHSEVKRFWKRQKSHS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgcgttcagcttcagtgtaagaacttgcacgagtatctgaaagaactgacc
ccagaaatcctcgacaggctctacaatcacccagcaacatgtctagcagtatacagggaa
cttccaccactggcaaagaattacgtgatgcgcatgctgtttttagaccatccactcccc
caggctgcggttgccctgtgggttaaaaaaggcagtcaaaaagaccatgatcaatgtgtg
tcggtgttaactgggctacggctctggcacagtcagcatcttcaaggtggacttcaaggt
ttcgtgctcaaccccgtgtttaaggacaacctgagaatagcacttctaggcggtggtaaa
ccgtgggcagacgagggtgccaatctgggtcccgatcggcatgcgagggatgtagagagt
ctggaccgctatgctatggagcgctgggaggtcatccttcacttcatggtgggctctcct
agcgcagctgtcagtcaggatctggctcagctcctcatacaggccgggctcatgaagagc
gagactggtgaggctccatgcatcacatcagcagggtttcagttcctgctgctggacacg
gcatctcagttgtggtacttcaccctgcagtacctcaaaacagcacagtcgagaggaatg
gacctggtggagattctttcctttttgttccagctgagtttttccactcttggaagggat
tattctgtggagggcatgagcgagtccctgctcacatttttgcagcatctacgagagttt
ggtctggtttttcaaagaaagaggaagtcaagaaggtactaccctacgagactcgccata
actctcgctgcaggagtcactgcaaacccagcctcgggatctgcctcttctgcactggga
gcaataccaggaacaggagacactggattcatcgttgtagaaactaattatcgcatatat
gcctatacaaactctgaacttcagattgcactggtcgctctgtttagtgagatgttgtat
cggtttcctaacctggtggttgcacaggtcacccgagagtctgtgcagcaggccatcagt
aacggcatcaccgcacagcagattattcacttcttacggacccgagcacacccagttatg
cttaaacagacccccgttctccccccaaccatcacagatcagatcagactgtgggagctt
gagaaagatcgcttgcagtttaccgagggagtgttatacaaccagtttttatcccaggct
gatttcgaagtgttgcgggacagggctcagggtttaggagtgctggtgtggcagaatccc
gctcacagggtcatggtggtgactcctcatggacacagcgaggttaagagattctggaag
agacaaaaaagccattcataa
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