Danio rerio (zebrafish): 406788
Help
Entry
406788 CDS
T01004
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
406788 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
406788 (cnot8)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
406788 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
406788 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
406788
NCBI-ProteinID:
NP_998644
ZFIN:
ZDB-GENE-040426-2845
Ensembl:
ENSDARG00000020043
UniProt:
Q7SXS5
LinkDB
All DBs
Position
21:complement(36442084..36453502)
Genome browser
AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIVQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQSQNGISNSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcaaattatctgcgaggtctgggccagcaatgtg
gaggaggagatgaggaagatacgacagatcattcagaactacaactacattgccatggac
actgagtttcccggtgtcgtggtccgtcccattggagaatttcgcagtactgttgactat
cagtaccagctcttaaggtgcaacgtggaccttttaaaaatcgttcagctgggtttgaca
tttatgaatgaagatggagactaccctccaggaaccacaacatggcagttcaacttcaag
tttaatctgacagaggacatgtactcgcaggactctatagatctcctccagaactctggg
ctgcagtttaagaagcacgaggaggaaggaatcgacacactttacttcgcagagcttctc
atgacttcaggcctggtgctctgtgaaaatgtcaagtggctctcctttcacagcgggtat
gattttggttacctggtgaagcttctcacggactcccggctgccagaggaagaacacgag
ttcttccagatcttaaatcttttctttcctgcaatctacgatgtcaaatatctgatgaag
agctgtaaaaaccttaagggtggacttcaggaagtggcggaccagttggagctcaaaaga
atcggcaggcagcatcaggccggctcagactctctgctcactggaatggctttcttccgc
atgaaagagctgttttttgaagacaacatcgatgacgccaagtactgcgggcgactctac
ggcctgggatcgggttctactcaaagtcagaacgggatctccaactcctcgcaggaagag
accaacaacaagcactga
DBGET
integrated database retrieval system
