Danio rerio (zebrafish): 407613
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Entry
407613 CDS
T01004
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
407613 (rbfox1l)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
407613 (rbfox1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
407613
NCBI-ProteinID:
NP_999940
ZFIN:
ZDB-GENE-040923-2
Ensembl:
ENSDARG00000021184
UniProt:
Q7ZT82
B3DK66
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All DBs
Position
16:complement(31900129..31919281)
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AA seq
382 aa
AA seq
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MLSSPTVILQPYGLPVYPQTASCYPGIVQGAAAQEAGPGNGDPSLPQVYAPPPSYPPPGQ
APPTPAARLPPLDFSAAHPNSEYADHHQLRVYQGPQHDGTESITASNTDDSLAPVTSDPQ
SLSVSVASGSGAAGGSDEEGGGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAVEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAAGW
KINPVMGAMYAPELYTVASFPYPVPTPTLAYRGSGLRGRGRAVYNTIRSAAAAATPAAVP
AYPGVVYQEGLYGAEVYGGYPATYRVAQSASAAATATYSDGYGRVYATATDPYHHSVGPT
TTYGVGTMASLYRGGYNRFTPY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttctcctactgtgatccttcagccctacggactcccagtttaccctcagacg
gcctcctgctaccccggcattgttcagggtgctgctgcccaggaggcggggccaggcaat
ggtgatccttcacttccccaggtttatgccccacccccttcatatcctccacctggacaa
gccccgcccacacctgctgcccgactgccacccctcgatttcagcgctgctcatccaaat
tcagaatatgcagatcatcatcagctgagagtctaccagggccctcagcacgacgggacg
gagtctataactgccagtaacacggatgattctctggcacccgtgacgtctgacccacag
tctctcagtgtttctgtggcctccggtagcggagctgcaggaggaagtgacgaggaagga
ggtgggaaggctcaacctaaaaggctccatgtttccaatatcccttttaggtttcgagac
ccagacttgaggcagatgtttgggcaatttggcaagattctagatgtagagatcatcttt
aatgagagaggatccaagggttttggatttgtgacgtttgaaagtgcagtggaagcagat
cgagccagagagaagctcaacggtacgatcgtggagggaaggaagattgaggtgaacaac
gctacagcaagggtggtaacaaaaaagccccagacgccattagttaatgctgccgggtgg
aaaatcaatccagtaatgggtgccatgtacgcccctgaactttatacagttgccagcttc
ccctatcccgttcccacaccaaccttggcctacagaggctctggtctccgtggacgaggt
cgagcagtttacaacacaatccgctccgcagccgccgctgccacaccagctgcagtgcca
gcctacccaggagtggtgtatcaggaaggactgtatggtgctgaggtctatggaggatat
ccagccacatatcgagtggcccagtcggcctcagcagctgcaaccgccacatacagtgat
ggatatggaagagtctatgccacagcaacagacccctaccatcactccgtgggacccaca
accacttatggagttggaacaatggccagtttataccgtggtggctacaaccgcttcaca
ccatactga
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integrated database retrieval system