Danio rerio (zebrafish): 449554
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Entry
449554 CDS
T01004
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
449554 (rbfox1)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
449554 (rbfox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
449554
NCBI-ProteinID:
NP_001005596
ZFIN:
ZDB-GENE-040927-11
Ensembl:
ENSDARG00000014746
UniProt:
Q642J5
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All DBs
Position
3:complement(27984158..28428193)
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AA seq
373 aa
AA seq
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MEEKGSKMVEQGNQDAPAPPETMAQPFPSAQFAPPQNGIPAEYTPSHPHPTPDYSGQTPV
AEHTLNLYTPAQTHSEPSGPDNSIQAVSGTATQTDDSAQTDSQQQTQSSEITEIKTQPKR
LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESSADADRAREKLHG
TVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAA
AAYRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDGFYGADIYGGYTAYRYTQPATA
TAAAYSDSYGRVYAADPYNHALAPAATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQA
SIYRGGYSRFAPY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagggagcaagatggtggaacagggtaatcaagacgccccagcaccccca
gaaaccatggcccagcctttcccatcggcccagttcgctccccctcagaacggcattcct
gctgagtacacgccgtcccaccctcacccgaccccagactactcgggccagaccccggtg
gcagagcacacgctgaacttgtacacccctgcccaaacgcacagtgagcccagcggacca
gacaacagcatacaggcggtctccggcacagccacacagacagacgattcagcacagaca
gacagccaacagcaaacacagtcatccgaaatcacagaaatcaaaacgcagcccaagagg
ctccacgtctccaacatccccttcaggttcagagatccagacctcaggcaaatgtttggc
caatttggtaaaatcttagatgttgaaatcatatttaatgaacgaggatcaaagggtttt
ggtttcgtaactttcgaaagtagtgccgatgcggacagggccagagagaaattacacggc
acggtggtagaaggtcgtaaaatagaggttaacaatgcaacagcacgggtaatgacgaat
aaaaagacagtcaacccatatgcaaatggctggaagttgaatccagtcgtgggtgcagtc
tacagcccagaattctatgcagtgccaggcttcccatacccagcagccacggcggcagcg
gcggcgtacagaggggcacacttaagaggaagaggccgcaccgtctacaacacgtttcgg
gcagccgcgcctcccccacacatcccagcctatggaggtgttgtttaccaggacgggttt
tacggtgcagatatttatggtggttacactgcctaccgatacactcagcctgctactgct
accgccgctgcctacagtgacagttacggacgagtttatgctgccgacccctacaaccac
gcacttgctccagcagccacatacagcgttggtgccatgaatgctttcgcacccttgact
gatgccaagaccagaagccacgccgatgatgtgggtctcgttctttcttctttgcaggct
agtatataccgaggtggatacagtcgtttcgcgccatattaa
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