Danio rerio (zebrafish): 554360
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Entry
554360 CDS
T01004
Symbol
lmx1bb
Name
(RefSeq) LIM homeobox transcription factor 1, beta b
KO
K09371
LIM homeobox transcription factor 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
554360 (lmx1bb)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
554360 (lmx1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
HTH_32
Motif
Other DBs
NCBI-GeneID:
554360
NCBI-ProteinID:
NP_001020338
ZFIN:
ZDB-GENE-050114-2
Ensembl:
ENSDARG00000068365
UniProt:
Q4L1M6
Q4VJ29
LinkDB
All DBs
Position
8:complement(33260675..33381913)
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AA seq
375 aa
AA seq
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MLDGIKIEDHPLRSGQATLGVMLGTECHHQAVCEGCQRPISDRFLMRVNESSWHEECLQC
AVCQQPLTTSCYFRERKLYCKYDYQQLFATKCSGCLEKIAPTEFVMRALECVYHLNCFCC
CVCDRQLRKGDEFVLKDGQLLCKSDYEREKDLLGSVSPDDSDSEKSEDEELDIKPEKGSG
GTGKGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV
WFQNQRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRMEGMMNSYTPLAPAQQQMVALENG
YSTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFMASSDAGSMQARVGN
PIDRLYSMQSSYFAS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgttggacggtataaaaatcgaagatcatccgctgcggtcgggacaagcaacacttgga
gttatgctcgggacggagtgccatcaccaggcggtgtgtgaggggtgccagcggccgata
tccgaccgctttctgatgcgcgtcaacgagtcttcatggcacgaggagtgtttgcaatgc
gccgtgtgtcaacaaccgctcaccaccagctgctacttccgggagaggaaactttactgc
aaatatgactaccaacagttatttgcgaccaaatgcagcggatgcctggagaaaattgca
cctacagaatttgtgatgcgggcgctggagtgtgtttaccatctcaactgcttctgctgc
tgtgtatgtgaccgacagctgaggaaaggagatgagtttgtgctgaaggacggacagttg
ctgtgcaagagcgattatgagagggaaaaagacctgctcggctctgtcagcccagatgac
tcagattcagagaaaagcgaagatgaggagctggatatcaagccggagaaaggctcggga
ggcaccgggaagggagatgatgggaaagaccctagaagacccaagagaccacgtaccatc
ctcaccacacagcagagacgagccttcaaggcgtcgttcgaggtgtcttccaaaccctgc
cggaaggtaagagagacactggctgcagagacaggtctgagcgtacgcgtggttcaagtg
tggttccagaaccaaagagctaagatgaagaagttggcgcggagacagcagcagcaacag
gagcagcagaactcccaaaggctgggccaagaggtaatgtccaatcggatggagggtatg
atgaactcctacacaccattggctccagcccagcagcaaatggttgcactggagaacggc
tacagcaccgaccccttccagcagggcctcacccctcctcagatgcccggtgaccacatg
aacccatatggaaatgactcgatattccacgacattgacagcgacacttctctgaccagc
ctcagtgactgctttatggcctcgtctgacgcgggatccatgcaggcccgagtgggaaac
cccatcgaccgactctactccatgcagagctcctatttcgcctcatga
DBGET
integrated database retrieval system
