Danio rerio (zebrafish): 556003
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Entry
556003 CDS
T01004
Symbol
sema4f
Name
(RefSeq) semaphorin-4F isoform X1
KO
K06521
semaphorin 4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dre04090
]
556003 (sema4f)
CD molecules [BR:
dre04090
]
Proteins
556003 (sema4f)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
Motif
Other DBs
NCBI-GeneID:
556003
NCBI-ProteinID:
XP_005166611
ZFIN:
ZDB-GENE-130530-860
Ensembl:
ENSDARG00000100308
UniProt:
A0A8M2BE08
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All DBs
Position
7:59334477..59470356
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AA seq
797 aa
AA seq
DB search
MNSVTGLFVLSVLLCSTLSSWSATVNSNGAEFPRLSGFGNLSTFLLHSESGMLYLGARDA
VIVVDTAKLSKKMIEWSVPEDRRKSCVAKGKTEDDCRNYVRLLEFLDDGRIYACGTFAFD
PQCAFINISTFSLEKQDDGFIKMETGKGKCPFEPSQPYTAVMAGGILYTAVTSNFLGTMY
DISRATGIEQERIRTEQSINWLSDPEFISSAFIQEDAKNNPTGEDDKIYFFFTEVAKEYD
LYTKVKVPRVARVCKSDVGGMKTLQRRWTTFLKAQLVCEDRASGQRFNILTDVFTVQHQP
GDPSSTHFYGIFTSQWEREELSAVCVYSLEEITKVMNGPFKELKKSCENWINPEPIPTPR
PGQCLNSDQRELGFESSLKLPDKVLTFMRDHPLMENSVVAVPLMIRYGITYTKLAVTLTP
AFSGQKQHITTVLHLGTDHGELHKVAVVGPNATLIEEITLFSAQEPVNNILLYKGEAVVG
SPHSLVKLPILGCSLYSSCEVCARAGGLGCIWRHNRPACAMAKPGEVVEAEDLVRQCNKR
EGLCSPPVIEMRVVEGLRVLLSCVQLSPRPCHWDHPPGSHTRHHNYDLEVQITNKSLGIY
VCLCDEAGRDQPPCRKAVYQLTLDNPRVEGNKAIAGSRHFMASHIFLFVIGFMLGGILLF
LIYKRQGGMTVGGNSSSTLEKGRDLLHSTDTPQSPSSASLLSEAVPITEKRNGTLNGHGH
SMHPGGHNGRHIYTNSSGLKLQESAVNLADELDGRERAGPDGEEEGLEEGLSEMEEAFSK
MPCLQGAPLAQCEESSI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagttactggtctatttgttttaagtgtgttgctgtgttcaacgttatcgtcc
tggagcgcaactgtcaacagtaatggagcagaatttccaagactgagtggatttggcaat
ttaagcaccttcctgttgcacagtgagtctgggatgctctaccttggtgcacgtgatgca
gtcattgtcgtggatactgctaaactttcaaagaaaatgattgagtggagtgttccagag
gacaggagaaaatcttgtgttgctaaaggaaaaacagaggatgactgcaggaattatgtt
cgtttgctggagtttttggacgatggccgcatatatgcctgtggaacatttgcttttgac
cctcagtgtgcttttattaacatctctacattctctctggagaaacaggatgatggtttt
ataaagatggagaccgggaaggggaaatgcccctttgagcctagccagccttacactgca
gtcatggcaggaggtattctgtacactgctgtcactagtaattttcttggcacaatgtat
gacatttccagagcaacaggcatcgagcaggaacgcatccgaactgagcaatcaatcaac
tggcttagtgatcccgagtttattagttctgcattcattcaagaggatgcaaagaacaat
cctactggtgaagatgacaaaatttacttcttctttactgaggtggctaaagaatatgac
ctctacaccaaagtcaaagtgcccagagtagccagagtctgcaagtctgatgtaggtggt
atgaagactctgcagagacgatggacgacatttctgaaggcacagctggtgtgtgaagat
cgagcaagtggacagcgatttaacattctgactgatgtattcactgtacagcaccaacct
ggagaccccagcagcacacacttctatggcatattcacctcacagtgggaaagagaggag
ctgtcagccgtgtgtgtgtacagtctagaggagattactaaggtgatgaacggacccttt
aaagagctaaaaaaaagctgtgagaactggattaacccagagcccataccaacaccacga
ccaggacagtgtttgaatagtgatcagagggagctgggatttgagtcttcactgaagctg
ccagataaagtacttactttcatgcgagatcaccctcttatggagaacagtgtggtagca
gtgcctttgatgatcagatatggtatcacatatactaaactggctgttaccttaacaccg
gcattcagtggccagaagcaacacatcacaactgttttgcaccttggaacagatcatgga
gagctacacaaagtcgctgtagttggtccaaatgcaactcttattgaagaaataaccctg
ttctctgctcaggagcctgtgaataatatattgctatacaaaggtgaggctgttgtgggc
tctcctcactctctagtgaagttacctatcttgggttgctccttgtactcttcttgtgag
gtgtgtgcgcgagccgggggccttggctgcatttggaggcataataggccagcttgtgct
atggcaaagcctggtgaagtggtggaagcagaagatttggtaaggcaatgcaacaaacgt
gaaggtctctgctctccgcccgttattgaaatgcgtgttgtagagggtctgcgagttctc
ctttcctgtgtgcaattgtcacctcgtccctgccactgggatcatccacctgggagtcac
acccgccaccacaattatgatctggaggtgcagattacaaacaagagtctgggcatctat
gtgtgcctatgtgatgaagcgggcagagaccagccaccctgtcgcaaagctgtgtatcag
ctgacacttgacaaccccagagtggagggtaacaaagccattgcaggtagccgacatttt
atggcctcgcacatatttctttttgttataggtttcatgctgggtggcatccttttgttt
ctaatttacaaacggcaaggtggcatgacagtaggtggaaactcatcatccacactggaa
aagggacgggaccttcttcattctacagacacccctcagtctccaagcagtgctagtcta
ctgtctgaggctgttccaataacagagaaaaggaatgggacactgaatggccacggacac
agtatgcacccaggtggtcacaatggcaggcacatttataccaattccagtgggctaaaa
ctgcaggaatcagctgtgaacttggcagatgagctggatggtagggaaagagcggggcca
gatggagaggaggaaggactggaggaggggcttagtgagatggaggaggcgttttctaag
atgccttgtctacaaggagcaccacttgcacaatgtgaagaaagctctatctga
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