Danio rerio (zebrafish): 557693
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Entry
557693 CDS
T01004
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X5
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
557693 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
557693 (rapgef2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
557693
NCBI-ProteinID:
XP_009289555
ZFIN:
ZDB-GENE-030131-6959
Ensembl:
ENSDARG00000005482
UniProt:
A0A0R4IBW6
LinkDB
All DBs
Position
14:complement(47782644..48033615)
Genome browser
AA seq
1618 aa
AA seq
DB search
MASYVDNSFRQAVMVNPSDRTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPAGKPPVARGYHTECVKA
QLPADFSRLHLADGIHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTHPDSRNEILCMGNSF
GVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLPSPMVVGKRLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFEYNLEREKMCGHLRLLNIACAA
KAKLRVVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQ
NFENVPLSKANEILKNNTHLSITVKTNLLVFKELLARPDQDQEQEQEEEPDRKNGAPHIP
KIGDIKKASRYSIPDLAVDVEQVMDLEKASKKAKANSAGGRNKLKKIFDKTLTSILPPKP
YNDVGVGQSQDDSIVGLKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPEAVPIN
MSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIK
QRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQELLRESHISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKLKTRLTGPPSLKLFEEAINRETFWVATEVVREANQLK
RMKIVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFSDLQDL
FDPSRNMAKYRNLLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMAAVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLTLETNEESLQTLSMQCEPSINTLPKSSGDRKRPDTSPVV
SRAATHQRQQLQKANQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEAGD
RHRKQAEDSVSNNSSQLSSPPTSPHSSPKKAIASIRSHGMKGFSSLCSKSPTGYGRAGDY
LSDSGHSEISSRSSLVSTSSLDMGQDERRQRYGGTAGEGHGSGHRLERRATADPDQYSLG
SYSSMQDCRGLYAGATVLSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTM
QQGRSWEALAEGAGLWGSRGSWASACSSSSSVACWGEDSEGDTGTIKRRGGRDVTTDPET
SSITSTGSEESRQHSRRPSPITAGNTKASITRKDGRYRDPPPTPPGYTALTITDVTEGTP
HSGRKPPDYTTALQRSRLVTHSLDSQQPPAAGKPDPRGREEDEAVEVEEEEDEQVSAV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctatgtggataacagttttcggcaggcggtgatggtgaatccgtcagacagg
acgcaacaggacctggagatcgtttattcatacctgcatgggatggaggctctgtccaac
ctccgcgaacaccagctgaggataatgtgtgaaacggtccgctacgaaagacacgaagcc
aacgaagtgctgtattatccagatgacattggcacatgctggtacattctactttccgga
tcggttttcatcaaagagtccatgttcttgccacgctccagtttcgggaagaggtctgcc
gggagtttgcgtcgtggatgcgagtgcatcgttctggagccgtccgagatgattgtggtg
gactatatggatgagaatgaggagtatttccagcggcaggcatcgcaccgacagtcacgc
cgacgctttcgcaagatcaaccagaagggcgagcggcagaccatcatcgacaccgtagac
ccctatcctgctggcaagccccccgtggcgcggggataccatacggaatgtgttaaagct
cagctgccggcagacttcagcaggttacacctggcagacgggattcaccctcaggtgaca
cacgtgtcctccagtcattcaggatgtagcatcaccagtgactctggaagcagcagcctg
tcggacatttaccaggccaccgagagtgagccgggcgacatggacctcagcggtctgcct
gagacggccgttgactccgaggaggacgatgatgaggaagacatcgagcgtgcctcagat
cccctcatgagccgagacatcgtccgagactgcctggagaaagaccccatggaccgaaca
gatgatgacatagagcaactgttggagttcatgcaccagctaccagcctttgccaacatg
accatgtctgtcaggagggagctgtgtgctgtcatggtgttcgctgtggtggaacgggcc
ggcaccatcgtccttaatgatggcgaagagctggactcgtggtctgtgattctgaatgga
tcggtggaagtgacgcatccagacagccgcaatgaaatcctctgcatgggcaacagcttc
ggcgtttctcccaccatggagaaagagtacatgaagggggtgatgaagaccaaggttgat
gactgccagtttgtgtgcatcgctcagcaggattactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtggaggaggaaggagagatcgtgatggtgaaggagcacagagag
ctggaccgcacaggcaccaggaaagggcacatcgtcatcaagggcacatcagagcgtctc
accatgcaccttgtagaagagcactcagtggtcgacccgacttacatcgaggacttcctg
ctcacctaccgcaccttcctgccgagccccatggtggtgggcaagagactgttggagtgg
tttcatgaccccagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaat
cactttaatgactttgagggcgaccctgcaatgacacattttctggaggagttcgagtac
aatctggagagagagaaaatgtgtggccacctaagactgttaaacatagcatgtgctgcc
aaagctaagctgcgtgtggtgaccctgaccaaaccctcgagggaagccccgctggccttc
accctgctgggcggctccgagaagggctttcgcatcttcatcgacagcgtggaacccggc
agtaaagctgcagaggccggccttaaaagaggagatcagatactggaggtaaatgggcaa
aactttgaaaatgtgccgctatccaaagccaacgagattctcaaaaacaacacgcacctg
tccattactgtgaaaaccaatctcttggtgtttaaggagctgctggccaggcctgaccag
gatcaggagcaagaacaagaagaggagcccgaccggaaaaacggggctccgcacatccct
aaaatcggggacattaagaaagccagccgctactccatccctgacctggctgtggacgtg
gagcaggtcatggatctggagaaagccagtaagaaagccaaggctaacagcgcaggcgga
agaaacaagctgaagaagatcttcgacaagacactgaccagtattcttccacccaaacct
tacaatgacgttggggtgggacagtcccaggatgacagtattgtgggcctgaagcagtca
aagcagattcctcctgctctccctgtcagtggaaacctttcatcaagcaaccctgacctg
ctgcagtcacaccatcgcatactcgacttcaacaaccagcctgaagcggtccctataaac
atgtcagaccaggtattgcgagtgttcaaggcggaccagcaaagtcggtacatcatgatt
gggaaggacaccacggcaaaagaagtggtggctcaggccatccgagagttcgccctcacc
gctgctgccgaagcctattcgttgtgtgaggtgtcagtcactcccgaaggagtcatcaag
caaaggagactccctgaacaactctccaaactggctgacaggatccagctgagtggaagg
tactacctgaaaagcaacatggagacagagacactgtgctcggatgaagatgcgcaggag
ttgctacgagagagccatatcagcctgctgcagctcagcacggtggaagtggcaacccaa
ctctccatgcgcgcctttgagctgttctgtgccatcgagcccaccgagtacatcgatgac
ctgtttaagctgaaaactcgcctcaccggaccccccagcctcaagctttttgaggaggcc
atcaatcgggagactttctgggtggccacagaggtggtgcgagaggccaaccagctcaaa
cgcatgaagattgtcaagcacttcattaagattgcactgcactgccgcgaatgcaagaac
ttcaactccatgtttgccatcatcagtggtctgaacttggcaccagtgtccaggctgaga
ggcacatgggagaagctgcccagcaaatacgagaagctgtttagcgatcttcaagacctc
ttcgatccctccaggaatatggccaagtatcgcaaccttctaaacagccagaacctgcag
ccccctatcatcccactcttccccgtaatcaagaaggatctcactttcctgcatgaaggg
aatgactccaaagtggacggtttggtgaactttgagaagctgcggatgatcgctaaagag
atccgacacgtgggcagaatggcagccgtaaacatggaccctgcactgatgttcagaacc
aggaagaagaaatggaggagtttagggtcactcagccagggcagtgccaacgcggctgtc
ctggatgtgacccagacgggtgggcacaagaagcgggtcagaaggagttccttccttaat
gccaagaagctgtacgaggacgcacagatggcacgcaaagtcaaacaatacctgtccaac
ctcaccctggagaccaacgaggagagcctgcaaacgctctcaatgcagtgtgagccctca
atcaacaccttgccgaagagttctggggacagaaagagacccgacacatcacccgtagtc
tcacgggctgcgacccaccagcgccagcagcttcaaaaagccaaccaggcgcttcaagtg
cctgccgtagccctctacccatcccgcaaaaaagtgccagtcaaagacttaccgccattt
ggcacaagctcaccacagtctctgaagaagatcctgtccctttcagaggaggcaggagac
agacaccgaaagcaggcagaggacagtgtgtccaacaactcctcacagctctcgtctcct
ccaacatctcctcacagctcacccaaaaaagccatcgcatcaataagaagtcatggtatg
aagggcttttcctccttgtgtagtaaatcaccaacaggttatggacgagctggtgattac
ctgtccgactctggccacagtgagatctcctcccgctccagtctggtgagcacttcttct
ctggacatggggcaggacgagcgccggcagcgttacggaggaacggccggagaaggacac
ggcagtggccaccggctcgagcgcagagctactgctgaccctgaccagtacagcttgggg
tcctactcctccatgcaggactgtcgtggtctgtacgcaggcgccaccgtcctgtcctca
cccagctcagaggagctcacgcaggaccagggtgaccgggtgtccctggacgctgcggat
tccggtcgtggcagctggacttcgtgctccagcggctctcatgataacatccagaccatg
cagcagggccgcagctgggaggcgctggcagagggcgcaggcctgtggggcagcagaggg
agctgggcatccgcatgctcctcttcttcttcggtggcatgttggggcgaggactctgaa
ggcgacactggcaccatcaaacggagaggagggagggatgtgaccacagatccagagacc
agcagcatcacctccaccgggtcggaagagtccagacagcacagccgacggccctcaccc
atcaccgcaggaaacaccaaggcttccatcacacggaaggacggccgctatcgggaccct
ccaccaacgccgccgggttacaccgcgctgaccatcacagatgtgaccgagggaacgcca
cattcgggcaggaaaccaccagactacaccaccgccctgcagcgctcgcgcctcgtcaca
cactccctcgactcccagcagcccccagccgcagggaaaccggacccccggggccgagag
gaggacgaggcagtggaggtggaggaggaggaggatgaacaagtgtctgctgtctga
DBGET
integrated database retrieval system
