Danio rerio (zebrafish): 560482
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Entry
560482 CDS
T01004
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
560482 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
560482 (rad54b)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
560482 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
560482
NCBI-ProteinID:
XP_688979
ZFIN:
ZDB-GENE-060810-50
Ensembl:
ENSDARG00000092134
UniProt:
E9QHY4
LinkDB
All DBs
Position
16:26732048..26757661
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AA seq
917 aa
AA seq
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MRRSGAPSQLRGNAAKKPRFMPPGPARNDGAPCLDPQPEPSQPSPPPIPALKNVLLNKVQ
RCLSSGDAPAASDAPVGSKALARVLGAAVPQGECKENHIRSMPDFPEPEESVNKDRRSPP
LNTHASCTTTAHYYSVIWCKASSRKHKRWEGDAVLVARGRTVVLKDMEGRDIGRGSGYKA
SELESLCEGQTLMVGGKQIEVMGVISDQDYAKGRCFQDAAVEIPAESPTVSKTPAYRPVS
KSFTKPALKGGALTDSELDKPICKPRYDPNAPGALVMPRPTADHQWQYNKSGAPLVDVVI
DPHLTNHLRPHQKEGVVFLYECLMGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGP
YGGRPVMKRALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFVSSPLCSVLVI
SYEMLLRSVDRLKELDFGVLICDEGHRLKNSNIKTAGALTALSCTRRLILTGTPVQNDLQ
EFYSIIEFVNPGILGTSAAYRKIYEEPILRSRQPSCTEEERCIGEERAAELFRLTGVFTL
RRTQEIINQYLSERIEWTVFCKPTELQIRLYRVLLSTRPIRACLSGSHTYTHSPHLVCIN
ALKKLCNHPALLYNTLQEKADEMYEGEVKELFPEEYSTGAFSTADSGKLLVLTDLLSAIQ
HVNRTDRVVLVSNHTQTLDLLQDVCDQIGYKWCRLDGQTPVGQRQKIVDSFNSPHSSSFL
LLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGSIE
EKIYQRQVSKQGLSGTVVDLTKKAEHISFSAEELRDLFRFDPNTTCLTHDLLNCKCSGDG
NTPGSVKESSEDTGRSCQLGRQADNAISVPQRVSMSELMHWRHFSGAVQSYGDIYLNQAC
NHITYAFQSTSKSKTTV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagatctggagctccgagtcagctccgtggaaatgctgctaagaaacccagattt
atgccaccgggtccagcgaggaatgatggagcaccttgtttggatccccaaccagaacca
tcacaaccctcaccgcctcccatacctgctttaaaaaatgtgctgctcaataaggtccag
aggtgtttgagtagtggagatgctccagctgcaagtgatgctccagtaggaagtaaggca
ctagccagggtccttggtgctgcggttcctcagggggaatgtaaggaaaaccacatcagg
tctatgcctgactttcctgaacccgaagaatcagtaaataaagacaggcgctcaccaccg
ctaaacactcatgctagctgcacaacaactgctcactactatagtgttatatggtgcaag
gcctcttcaaggaagcataagcgctgggaaggtgatgctgtgcttgttgccagagggcga
acggttgtccttaaagacatggagggccgggacattggacgaggttcaggttacaaggca
tcagagctggagagtttgtgtgagggtcagactcttatggttggagggaagcaaatagag
gtcatgggggtcatatctgatcaagactatgccaaaggccgctgtttccaagatgcggct
gtcgagattcctgcagaaagccctacagtctcgaagactcctgcatatcggccggtatcc
aaatcctttaccaagccagcgctcaagggaggcgcacttacagattctgaacttgacaaa
ccaatctgtaaacctcgatatgacccgaacgcaccaggagccctggtgatgccacggcct
acagcagatcaccagtggcagtataataaatctggagctccactggttgacgtggtcatc
gaccctcacttgaccaatcaccttcggccacatcagaaagagggcgtggtcttcctttac
gaatgcttaatgggaatgagattggctggccgctgtggggcgattctagcagatgagatg
ggattggggaaaactctgcagtgtgtttgtgttttgtggacattactcaggcaggggccc
tatggtggacgtcccgtaatgaaaagagcacttgtggtttgtcctggaagtttggtgaag
aactgggctgctgagttcaacaagtggctgggcagagagagaatcagtgtttacaccgtg
gaccaggatcaccgtgtggaagactttgtttcttctcctctttgctccgtcctggtcatc
agctatgagatgttgttgcgctctgtggaccggctgaaagaactggattttggagtcctc
atctgtgacgaaggtcatcgcctaaaaaacagcaacatcaaaacagctggagctctcaca
gccctctcatgcacacgccggcttattttaacaggtactccggtgcaaaatgatctgcag
gagttttattcaatcatcgagtttgtaaatccaggaattctgggaacatctgcggcctac
aggaagatttatgaagagcccattctccgatctcgccagcccagctgcaccgaagaagag
cggtgtattggagaagagcgtgctgctgagctctttcgtctgacaggtgtctttacatta
cgccgcactcaggagatcattaatcagtatttatctgagcggatcgagtggactgtgttc
tgcaaacccaccgagctgcaaattcgtctgtacagggtacttctgtccacgcgacccata
agagcctgtttgtctggctctcacacttacacacacagccctcaccttgtatgcatcaac
gcccttaagaaactctgcaaccaccctgcactgctctacaacacactacaggaaaaggca
gatgagatgtatgagggtgaagttaaggagctctttcctgaggaatactccaccggcgcc
ttcagcacagcagactctggcaaacttttagtgttaacagaccttctgtcagccatacag
catgtcaatcgcacagacagggttgttttggtgtccaaccacacacagactcttgactta
ctccaggacgtctgtgatcagataggctataaatggtgtcgtcttgatggacagacacca
gttggccagcggcagaaaattgttgattccttcaacagcccacattcgtccagctttcta
ctgctgctcagctccaaagctggaggagtgggactaaacctcatcggtgcctctcacctc
gttttatatgatatagactggaatcctgccaatgacatacaggccatggcacgagtgtgg
agagatggacagaagaaaacagttcatatctacagatttctcacaacaggttccatagaa
gagaagatttatcagaggcaggtgagtaaacaagggctttctgggacagtggtggacctg
accaaaaaagctgagcatattagcttttcggctgaggagctgcgagacctttttaggttt
gaccctaataccacctgcctcacacatgacttactgaactgcaagtgctctggagatgga
aatacaccaggttctgtgaaggagtccagtgaggacactggaaggtcatgtcagctgggt
cgccaagccgacaacgcaatatcagtcccacagcgagtcagcatgtctgagctcatgcac
tggaggcatttttcaggagctgttcaatcatatggtgatatttacctaaatcaggcctgt
aaccacattacatatgcctttcaaagcacttctaaatccaaaaccacagtctaa
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