Danio rerio (zebrafish): 562327
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Entry
562327 CDS
T01004
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
562327 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
562327 (pcgf5a)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
562327 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-Nse
zf-RING_10
zf-RING_6
E3_UbLigase_R4
zf-rbx1
DUF3337
zf-C3HC4_5
zinc-ribbons_6
DUF1272
zf-RING_16
TRAF3_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
562327
NCBI-ProteinID:
NP_001122184
ZFIN:
ZDB-GENE-080723-33
Ensembl:
ENSDARG00000071007
UniProt:
B3DK16
LinkDB
All DBs
Position
17:complement(23433603..23446686)
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AA seq
234 aa
AA seq
DB search
MATHRKHLVRDFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEHQESEFWRKHKIKSNGEDGPRAKKSRLSG
EDDDGNGGDYHRSDPQIAICLDCLRNNGQSGESIVKGLMKKFIRCSTRVTVGTIKKFLCV
KLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGDSAYPMVLEYRPRIDFG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccaccgaaagcatctggtccgagatttcaacagatacatcacttgctccatt
tgccgtgggtacttgatcaagcccacagctgtcacagaatgcctgcacaccttttgtaag
agctgtatcgttcagcattttgaggagagtaatgagtgtcctgaatgtgggatacaagtc
cacgaaacaaatcctttagagatgctgaggctagataagaccctagaggagatcatcttt
aaactggtgcctggactaagagaaaaggaggaacatcaggaaagtgaattttggagaaaa
cacaagatcaaatcaaatggagaagatggtcctagagctaagaaatctcgactgagtggt
gaagatgatgatgggaatggtggcgactaccacaggagtgatcctcagattgctatttgt
ctggactgtctaagaaacaatggccagtcaggagaaagcatagttaagggtttaatgaag
aaattcatccgctgctccacccgtgttacagtgggaaccattaagaagttcctctgtgta
aagttgaagctgccaagctcttatgaacttgatgttttgtgtaacggtgagattatgggt
aaagatcacaccctggagttcatctaccgaacccgctggagacttcaaggggacagtgct
tatcccatggttctcgagtaccgtccaaggatcgactttggctaa
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integrated database retrieval system
