Danio rerio (zebrafish): 564274
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Entry
564274 CDS
T01004
Symbol
cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X7
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
564274 (cacna1e)
04020 Calcium signaling pathway
564274 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
564274 (cacna1e)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
564274 (cacna1e)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
564274
NCBI-ProteinID:
XP_017212913
UniProt:
A0A8M6Z865
LinkDB
All DBs
Position
8:14612844..14829685
Genome browser
AA seq
2285 aa
AA seq
DB search
MARFGDDVPGLLGAGDGGSERSRNRDAPAVSTGGVSPAFKQTKAQRARTMALYNPIPVRQ
NCFTVNRSLFIFGEDNIVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPM
AKRLEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVSSGILATAGAHM
NISLDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHKQCEPVGKDSERADSPENEFPCGSKLCPDHYNCSGYWTGPNDGITQFDNILF
SLLTVFQCITMEGWTTILYYTNDALGSTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKE
RERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIK
RRGVDDARRAPEEQYADISSLGMPLNRASIRSAKRGPTSYFRRKERLLRISVRRMVKTQT
FYWTVLGLVALNTLCVAIVHHKQPQWLSSLLYYAEFLFLGLFLTEMFLKMYGLGPRLYFH
SSFNCFDCGVIVGSIFEVFWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLM
NSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFDEYTPTNFDTFPAAIMTVFQILTGED
WNEVMYNGIRSQGGVKSGMWSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEE
EEEAFNQKHALQKAKEVGPMSSFMSSERRRRPYLYRKRAIHRSRAAYSFEDAESLADARP
FNASNSFMSRRERRRRLTMSVWEQRTSQLRRHRQMSSREILFSSPSEEQDGPPGCPLHRK
PGLSPSGSKRRATETTSTTIMPEGTLEPPMPMDMPVDEQALPISIPEPPLAIPIPEPPMP
VDACLPEPPVTLNLPLTEPSESKTSPEGALDINNHCPRLNGNRRQRAVRKHRPPAMGDML
TPDMGPRPRRPRHRELHTDPRGKETLQGDGVDGKEQKPGSEGDEKSDGEISPDGRGLEQR
QNKPDNTESSTESKPANSPRKIPPLDSEPATLQLTDNTLQQSSQGTTCAGETDNNNHGSL
NQDKSSLNTSIVIEVTDTQPSMELTSITGNSKDVEASKPEKEEETPDAPKGPPPVSMFIF
KPNNPVRRACHYVVNLRYFEMSILLVIAASSIALAAEDPVNTNSDRNKVLRYFDYVFTGV
FTFEMIIKMIDQGLVLHYGSYFRDPWNILDFIVVVGALVAFALTNVMGSNTGRDIKTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFY
YCTDSSKDTENECKGYYIDYDKDKKKEKREWKRRDFHYDNVVWALLTLFTVSTGEGWPQV
LQHSVDVTEEDRGPSQGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEEC
SLEKNERACIDFAISAKPLTRYMPQNRQTLQYRLWQFVVSPSFEYTVLTMIALNTIVLMM
KHHDPRLEGYDDVLKYLNTIFTVIFSVECVLKILAFGIMNYFRDTWNIFDFITVLGSITE
ILVDKFQTGKTFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQVFGNIKINEKTQINEHNNFRTFFGALMLLFRSATGESWQEIMLSCLGEKEC
EIDTSVNSTTKTIKNDCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFVRIWGEYDRAACGRIHYTDMYEMLTCMSPPLGLGKKCPSKVAYKRLVLMNMPV
DEDMSVHFTSTLMALIRTALDIKIARGGEDRGQMDVELQKEISVIWPHLSQKSLDLLVPI
HKASDMTIGKIYAAMMIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKA
LPFLTHSAGSALTRGGFVALSPISPQDLFMQPMTQDSMEEREEYQHPYHLQSMVPEHKEF
SSVMCPTSMQADPLQVPGRGVSIRASSMPRLAVEPQASLENKLMKRSFSTIGDQCVNGDW
QEEFSLERVSPDRLERPRQRSFRGVRSNLREPVDKERGRSKERRHLLSPDVSRCNSEERS
QSQERRHSPSPSEGRKHTALRQGNNTGSPIASTSDSGTPRGRRQLPQTPSRPRPHISYSP
LVCRAHPAPGDDRPRAPPAEEGEEPTATGPGTAMAHSTPHRYISEPYLPLQEDVNSPDSS
GVEETLTFEAAIATSLGRSNTISSAPQLRHSWQVPNGHFRKRLAQATAGTSGCELLSDTD
EDDRC
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgatgttcccggtctgctgggagccggggatgggggttcggag
cgcagtcggaaccgggatgctccggcggtatccacaggtggagtttcaccagccttcaaa
cagaccaaagcgcaacgagcccgaaccatggctctgtacaaccccattcctgtccgacag
aactgcttcaccgtcaacagatctctcttcatctttggagaggacaacatcgttaggaag
tatgccaagaagatcatagagtggcctccgtttgaatacatgatcctggccaccattatt
gctaactgcatcgtcctagccttggagcagcacctgcctggagaagacaagacacccatg
gctaagagacttgaaaaaacagagccctacttcataggaatgttttgctttgaagctgga
ataaaaatcattgctttgggatttgtattccacaagggctcgtacctgaggaatggttgg
aacgtcatggactttattgtcgtatcgagtgggattctggccacagcaggagcccacatg
aatatttcattagacctgcgcacactgagggctgtgagggtattacggcccctcaaactg
gtctctggcattcctagtctgcaaatagttcttaaatccataatgaaggcaatggtgcca
ttgcttcagatcggactgctactgttttttgctattctaatgtttgccattattggatta
gagttctacagtgggaaactccacaagcaatgtgaacctgtaggtaaagattctgagaga
gcagactcgcctgagaatgaatttccatgtggaagcaaactgtgtcctgaccattataac
tgctctggctactggacgggacccaatgatggcatcactcagtttgataacatcttattt
tctttactcaccgtcttccagtgcatcaccatggaaggctggacgaccatcctctattac
accaacgatgccttaggctctacttggaattggctctacttcattcctctaatcataatt
ggctccttctttgtgttgaatctggtattaggagtcctgtcaggggagtttgctaaagag
cgagagcgggtagagaaccggagagccttcatgaagcttaggagacagcagcagattgag
agggagctgaacggatatcgggcctggatcgaccgtgcagaggaggttatgcttgcagag
gagaacaagaattcaggaccttctgctttggatgtgctaaaaagagctaccaccataaag
agaagaggagtggatgatgctcgaagagctccagaagagcagtatgctgacatctcatct
ctagggatgccactgaacagagccagcatacgcagtgctaaaagaggaccaacatcctat
ttccgacggaaagagcgcctgctacggatctccgtccgccgtatggtgaagactcagacg
ttctactggactgttctgggtctggtagccctcaacactctctgtgtagccatcgtacat
cacaaacagccacagtggttatctagtctcctctactatgcagagtttttgtttctgggt
ttgtttcttaccgagatgtttctgaagatgtatggactcggacccagactctattttcac
tcctccttcaactgcttcgattgtggggttatagtaggcagcatctttgaggtgttctgg
ggcttcttcagacctggcacatcctttgggatcagcgttcttcgtgccttgcggttgttg
agaattttcaagataaccaaatactgggcgtccctgaggaacctggtcgtgtctctgatg
aactcaatgaagtctattatcagtttgctcttcctgctttttctctttattgtggtcttt
gcacttctgggcatgcagctctttggtggaaggttcatttttgatgagtacactcccacc
aattttgacactttcccagcagccatcatgacagtgtttcaaattctgactggtgaggac
tggaatgaagtcatgtacaatggcatccggtctcaaggtggcgtgaaatctgggatgtgg
tcgtctgtctacttcattgttctcactctgtttggaaattatacgctgcttaacgtcttc
ttggctatcgctgtcgacaatttggccaatgcccaggagctcacaaaggacgaagaggag
gaggaagaggcgtttaatcagaaacatgccctgcagaaagccaaggaggttgggcccatg
tcctctttcatgtcctcagagaggaggaggaggccctacctgtacaggaagcgtgcaatt
catcggagccgtgcagcctactccttcgaggatgcagagagtctggctgacgctcgtcca
ttcaatgcctctaactctttcatgtccaggagagagaggaggaggaggttgaccatgtca
gtgtgggagcagaggaccagccagctgcggcggcacaggcagatgtccagccgcgagatc
cttttcagcagccccagtgaagaacaggacggaccaccaggctgccctctccaccggaaa
cctggactatctccatctggcagcaagcgcagagccactgagaccacttcaaccacaatc
atgccagagggtaccttagagccacccatgcctatggacatgccggtggatgagcaagct
ctgcccatttctattcctgaaccccctttagccattccaattccagagccaccaatgccc
gtggacgcatgcctccctgaacccccagttacactgaatctgcccttaacagagccatct
gaatcaaagacttcacccgagggtgctctggacatcaacaaccattgccctagactaaat
gggaacaggcggcagcgggctgtccgtaagcacagacctcctgctatgggggacatgctg
acccctgatatggggcccaggccccgacggccacgccaccgcgagcttcacacagacccc
aggggaaaagagactctgcaaggtgatggtgttgacggtaaagaacaaaagccaggaagt
gagggtgatgaaaagagtgatggagaaatcagtccagatggcagagggcttgaacaaagg
cagaacaaaccagacaacacagaatcatccacagagtccaaaccagcaaattccccccgc
aaaatcccacctcttgactctgaacctgctactctacagctcactgacaacacactgcag
cagtcttcacagggaactacatgtgccggtgagaccgataacaataaccacgggtccttg
aatcaggataagtcctccctcaacaccagcatcgtgatagaggtcaccgacactcagcca
tccatggagctgacctccattacgggtaatagtaaagatgtggaggcctcaaagccagag
aaagaagaagaaaccccagatgcacccaaagggcctccacctgtcagcatgttcatcttc
aaacccaacaacccggtccgcagggcctgccactacgttgtcaaccttcgttattttgag
atgtcaatccttcttgtgatcgccgccagcagtatcgcattggctgccgaagaccccgtc
aacactaattcggacaggaacaaagttctgcgctattttgactatgtattcactggggtc
ttcacgtttgaaatgataatcaagatgattgatcaggggttggtcttacactatggctcc
tattttcgtgacccgtggaacattctggatttcatagttgtggtgggagctctggtggct
tttgctctcacgaatgtgatggggagtaacacaggaagagacattaaaaccattaaatcg
ctgcgtgtactccgagttctgaggcctctcaagacgattaaaagacttcctaaactcaag
gctgtgtttgactgtgtggtaacatcactgaagaatgttttcaacatcctcatcgtctac
aagctgtttatgttcatatttgccgtcattgccgtgcagcttttcaaagggaaattttac
tactgtaccgacagttccaaggacactgaaaacgagtgcaaaggctactacattgactat
gataaagacaagaaaaaggagaaacgagagtggaagagacgcgatttccattatgataac
gttgtctgggctctgttgactctcttcaccgtatccactggcgaaggctggccgcaagtt
ctgcaacactctgtggatgtgacagaggaggaccggggtcccagtcaggggaacaggatg
gagatgtctatcttctatgtcatttattttgtggtgttccccttcttcttcgtcaacata
tttgtggccctcatcatcatcactttccaagaacagggtgacaaaatgatggaggagtgt
agtctggagaaaaacgagagggcttgtatcgactttgccatcagtgccaaacctttgact
cgctacatgccccagaacagacagaccttacagtacagactgtggcaatttgtggtgtcg
ccctcatttgagtacacagtactgacaatgatcgcccttaacaccatcgttctcatgatg
aagcatcatgatcctcgtcttgaaggctatgacgatgtgctcaaatatctcaacacaatt
ttcaccgttattttctctgttgagtgtgttctcaagatcctggcttttggtataatgaac
tatttcagagacacatggaatatatttgacttcatcacggttctaggaagcatcacagaa
attctggtggacaaatttcagactggaaaaacttttaatatgggcttcctgaagctattc
cgggcagctcggctgattaaactcctgcgtcagggctacaccatccgtattctgctctgg
acttttgttcagtccttcaaggctctaccatatgtctgtctgctcatcgccatgctgttt
ttcatctatgccatcattggcatgcaggtatttggcaacatcaagataaatgagaaaacc
caaatcaatgaacacaataacttcaggactttctttggtgcactcatgcttttgttcagg
agtgcaacaggtgaatcatggcaggaaatcatgctatcgtgtttaggagagaaggagtgt
gaaattgacacttctgtcaactcaacaacaaagacaataaaaaacgactgcggtaccgac
tttgcctacttctactttgtctccttcatcttcttcagttcttttctgatgctgaatctg
tttgtggctgtgatcatggataattttgagtacctgacacgtgactcatccattctgggt
cctcaccacttagatgagtttgtacggatctggggagagtatgaccgtgctgcatgtggc
cgtattcattacactgatatgtacgagatgctgacctgcatgtcgccaccgcttggcctg
ggcaagaaatgtccctccaaagtggcgtataagcggttggttctgatgaacatgccagtg
gatgaagacatgtctgtccacttcacctccacacttatggccctcatacgcaccgcactg
gacattaaaattgctcgaggaggggaagacaggggtcagatggatgttgaactgcagaag
gaaatcagtgtcatctggccgcatctctcacagaaatctcttgatctgcttgtacccatt
cacaaagctagtgacatgaccattgggaagatctatgcagccatgatgatcatggactac
tacaagcagaacaaagccaagaagctccgtcagcagctcgaggaacagaaacacgcacca
atgttccaacgcatggatgcatcctcgctgccgcaggacatcctctgcagtgccaaggct
ttgccattcctgactcacagtgcaggatctgccctcactagaggtgggtttgtggcactg
agtcctatctctcctcaagatctcttcatgcagcccatgacccaagacagcatggaggag
agggaggaataccaacacccgtatcacctgcaaagcatggtgcctgagcacaaagaattt
agcagtgtgatgtgccccactagcatgcaggctgatccactgcaagtgccaggaagaggc
gtctctatccgagcctcttccatgcctcgcctggcggtagagccacaggcctctttagag
aacaaactgatgaagcgctcattctccaccatcggggatcagtgtgtaaatggtgactgg
caggaagagttctctctggagagggtgagtcctgaccggctggagagacccaggcaaaga
agcttcagaggtgtcaggtcaaacctgcgggagccagtggacaaagagagaggacggtct
aaagaacgaagacacctgctgtctccagatgtgtctcgctgcaactcagaggaaaggagt
cagtctcaggagagacgtcattctccatcgcccagtgaggggaggaagcacacagctctc
agacagggaaataatacaggcagccctattgcctccacgtctgattcagggacgcctcga
ggacgccgccaactcccacagacaccctctcgccctcggcctcatatctcctactctcct
ttagtgtgccgtgcccatccagcaccaggggatgatcggccacgagctccacccgcagag
gaaggagaggagcccactgcaaccggcccaggcaccgccatggcccactctacccctcac
cgctacatctcagagccctacctgccactgcaggaggacgtcaacagtccagactccagt
ggtgtggaggagactctcacttttgaggctgcaatagcaaccagcctgggccgctctaat
accattagctcggcgccacagctacgtcactcctggcaggtgcctaatggacatttccgc
aaacgactagcacaagccacagctgggacgtccggctgtgagcttctcagtgacaccgat
gaggatgaccgctgttag
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integrated database retrieval system
