Danio rerio (zebrafish): 566352
Help
Entry
566352 CDS
T01004
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
566352 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
566352 (arid2)
03021 Transcription machinery [BR:
dre03021
]
566352 (arid2)
03036 Chromosome and associated proteins [BR:
dre03036
]
566352 (arid2)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
ARID
566352 (arid2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
566352 (arid2)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
566352 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
566352
NCBI-ProteinID:
NP_001071231
ZFIN:
ZDB-GENE-030131-6311
Ensembl:
ENSDARG00000007413
UniProt:
A0JPE6
LinkDB
All DBs
Position
4:complement(1647096..1684431)
Genome browser
AA seq
1570 aa
AA seq
DB search
MANSTGKNLPEQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGF
AKVSDKNQWVELVEDFQFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSTDFIPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHAGVFDDSLGSFSAVFGTDWQEKTSRDFVRFWKDV
IEDNEVKDLISDKSCTPQNGLELRDICTPLFHPARNTGIGDVEGQRVLQVAMILRNLSFE
EANIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNFAGELQLDPVDFRTTHLMFHTI
TKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREIIALLTLPDVMLVISAL
EVLYQLAELGEITCSKISSVERSIDLLVRLVSVDLQTFGPDALTAVKLIEHQASSSQVSE
VRPQLVEHVPAATQGTPAAVNRTPVQSTPPPGIVEIDGEKFTTQWLNAHFEVHSDGSVSR
SEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLNGQAQIHVVGVRKR
AIPLPVQLYYQQQQQASPAPVPKHEAPSETPQAHSALPPGVGGQPVRAPAPSLTAGQAAP
QVAFTMHAPPLANSPSAPAPRPPLNPPGQAALPPCPPAAAPVPIRPNDILKTAMIQSSIP
TASAAPAVPNHSGSSTQQPLLHHAPVALIQQGPPPQGHVFTGQVHGVCTSVGQQRPQAPS
QEAMVLAQPQYVTTPCTPLMAGGQVVTVAGVTGSRVAFQNIAPKPTHQVQSPQPPPTQPQ
SLVIVSPNQQPNTAFAPAIHQIVLTNPNPQQTPAPTSPNAAVPNPAPVQPHTVSQMLSVK
RQFQPTPPPAASPVQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPAPVSTRAPSPQ
VVYQVTNSAPVPPQPQLNVQLMQSPGAVPISILPGQIISTSTSGTILQATPSNQVTFTVV
PNSGFPGQGVQTPPTIGLQLTQTPPLPVAGATPIPPFRGDKIICQKEEEAKDATGLHVHE
RKIEVMENNSIADASAKASNGETAEAEAPKLLNGRKFDSSLPPYHSGNSPSEAPNGPVAQ
SGCDGKQTPADPKKLMVNGVCDFERSDDASHPSKNIPNHKASKHMGNGEVLSPKAHGALG
LAEDTARAEPPERLANGPCHGADLSNGPSSETLSLRPQHAPHNHSPPPAAPNPPSANGTA
ESRTLKRPLEDADRGTSAIPAKMGVRIVTISDPNNAGNSATMVAVPAGADPSTVAKVAIE
NAAQQRPSVPSPLPETNAQPVSVQTPPPVDPAAQGTNQSSPAPALSPEQTRKPGQNFKCL
WQACKRWFDTPSQVFYHAATLHGSKDSYPGQCQWEGCEPFPRQRLSFITHLQGKHCSREA
LIAALKLEEQTQGSNPNTSKSPPAAVSSPPPPPRPPKALVNHPSAALMALRRGSRNLVFR
DFTDDKEGPVTKHIRLTAALTLKNIAKYSDCGRKMVKRHENHLSVLALSSMEVSTTLAKC
LYELTRSLQA
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagcagcggaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccacagcagaggatctccgtttaaaaaggttcccgtggtg
ggtgggaaggagctggacctgggcgctctctatgtgagagtggtgtctttagggggcttc
gcgaaggtgtccgacaagaaccagtgggtcgagctggtcgaggatttccaattccccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgctatttagagaagtat
gaaaaggtgcatcactttggagaggaagatgaagaagagcagccggggaatcctaaacat
ttgcttccgattggtgcaatacccacgtcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctatcgacggattttatccctccatccgattacaacaaa
ctggtgctgtccctcttatctgggctcccgaatgaggtggacttcgccattaacgtgtgc
acgctgctgtccaacgagagcaagcacgccatgcagctagaaaaagagcccaaactcgtc
acactgctgctggcacacgccggagtattcgacgactcattaggcagcttttctgctgta
ttcgggacggactggcaggagaaaacgtcacgagattttgtgaggttttggaaagatgtt
attgaagacaatgaagtcaaagatcttatctcagataagagctgcacacctcaaaatgga
ttggagctgagggacatctgcactcctctcttccacccggcccgtaacacaggcattggg
gacgtggagggccagcgggtgctgcaggttgcgatgatcctgaggaatttgtccttcgag
gaggcaaacattaaactgctggcagctaatcgcacatgtctgcgcttcctcttactgtgc
gctcactgcaccttcatccagctgcggcagctcggcctcgacacactcggaaacttcgcc
ggagagcttcagctggatccggttgatttccgaacaacgcatctgatgtttcacaccatc
accaaatgcttattgtcacgggatcgttttctcaaaatgagggccatggaaatcctgggg
aacctgagcaaagtggaggataacggtgtgctgatctgcgagtatgtggatcaggagtca
taccgagaaatcattgctcttctgacgctgccggacgtcatgctggtcatctctgcgctg
gaggtcctgtatcagctggctgagctcggagagataacctgctccaaaatctcctccgtg
gagagaagcatagatcttttagtacggctggtctcggtggacctgcagacattcggaccg
gatgcactgacggcagtgaaactgatcgagcatcaggcctccagctctcaggtgtccgag
gttcgaccgcagctcgtagagcatgttcctgcagctacgcaaggcactcctgctgctgta
aataggacacctgtgcagtctacgcctccaccagggatcgtggaaatagacggagagaaa
tttacgactcagtggctaaacgctcattttgaggtgcattcagatgggtcagtctcgcgc
tcagagatgtactctgaatatctggcaacctgcagcaagatggcacggggtggtgtgcta
acatccaacaacttctacaaatgcctgcggacgctgtttcctaatcacacagtaaaacgt
gtggaggacacacggctgaatgggcaggctcaaatccacgtggttggtgttcgaaagagg
gcgattcctcttcctgtccagctttattatcagcagcagcagcaggccagtcctgcacca
gttcccaaacatgaagccccctcagaaacccctcaggcccattcagcattgccccctggt
gtgggtgggcagcctgtccgggcaccagcaccaagccttactgccggccaggcagcacca
caggtggccttcaccatgcatgcaccgccgctcgctaactctcctagtgctccagctcca
cgtcccccgctcaacccaccaggacaagccgcacttcccccctgcccaccagccgctgcc
ccagttcccatacgcccgaatgacatcctcaaaacagccatgatccagagctccatcccc
acggcctccgctgctcctgctgttcccaaccacagtggctcgtctacccagcagcctctg
ctccatcacgcccccgttgcactgatccagcaggggccacccccacagggacacgtattt
actggtcaagtgcatggggtctgtacatcggtgggccagcagcgccctcaagccccttcc
caggaggccatggtgctggcgcagcctcagtatgtgaccacaccatgcactccactgatg
gcaggagggcaggttgtaactgttgcaggcgtgacaggctctcgtgttgcatttcagaac
attgcccccaaacctacacatcaagtacagtcgccacaacctccgccaacacaaccacag
agcctagtcatcgtcagcccaaatcaacaacccaacactgcatttgcccctgccatccat
cagatcgttctcaccaaccccaatccacagcaaacaccggctcccacttctccgaatgcg
gcggtcccgaacccagcgccggtgcagccgcacactgtcagccagatgctgtcagtaaag
cgtcagttccagcccaccccgccacccgctgcttccccagtccagcctacctccactgaa
tccagtctgatcaaacagctactgcttcccaaacgcggtccttccacccctggtggaaaa
ctcatcctccctgctccacaagtccccgctcctgttagcaccagggcgcccagtccgcaa
gtcgtataccaggtgacgaacagcgctccagtgccacctcaaccacagttaaacgttcag
cttatgcagagtcccggtgccgttcccatctccatcctccccggacagatcatctccacc
tccacctctggcaccatcctccaagccacccccagcaaccaagttaccttcacagtagtg
ccaaactctggctttccaggccagggagtgcagaccccacccacaatcggcctgcagctg
actcagactccgcctctgccagtagcaggagccacgcccatcccgcctttcagaggcgac
aaaatcatctgccaaaaggaagaggaagccaaggacgccacaggactgcacgtccacgag
cgcaagatcgaggtcatggagaacaactccatcgccgacgcttcggccaaagccagcaac
ggggaaacggcagaagcggaggcacccaagctgcttaacgggaggaaattcgactctagt
ctacctccataccactcagggaacagcccatcagaggcgcccaatggtcctgtagcgcag
agcggatgcgacgggaagcagacacctgcggaccctaaaaagctaatggtgaacggagtg
tgcgactttgagcgatcggacgacgcttcccatccaagcaaaaacattccaaatcacaag
gcttccaaacacatggggaacggggaggtgctgtcgccgaaagctcacggtgcactgggc
cttgcggaggacactgccagagcagagccacctgaacgcctggccaacgggccctgccac
ggcgcagacctctccaatgggcccagctcagagactttaagcttgaggccacagcacgct
cctcataaccactcgccgcctccagccgctcccaacccgccgtcagctaacggcaccgcg
gagagccggacgctgaagagaccgctggaggacgcggaccgaggtacctccgctatccct
gctaaaatgggtgtacggatagtgaccatcagcgaccccaacaatgccggtaacagcgcc
accatggtggctgtgccggcgggcgcagacccaagcacagtagcaaaagtagcaatagag
aacgcagcgcagcagagaccaagtgtgccctcgccgctgcctgaaaccaatgctcagcct
gtgtcagtgcagactccgcctcctgtggatccggctgcacagggaaccaatcagagttct
ccagcacccgccctctctccagagcaaacacggaaacctggacagaactttaagtgtctg
tggcaagcatgcaaacggtggtttgacacgccatcacaggtgttttaccatgcagcgacc
cttcatggcagtaaagactcatacccagggcagtgccaatgggagggatgtgaacctttt
cctcgccagagattatccttcatcacacacctacagggtaagcactgctcgagggaagca
ctcatagctgcactcaaactggaggagcaaacgcaaggcagcaaccccaacacttccaag
tctcctccagcggcggtcagcagtcctcctcctcctcccagacccccgaaagcactcgtc
aaccaccccagtgcagctctgatggcgttacgcaggggctccaggaacctcgtgttcagg
gacttcacagatgataaagagggaccagtgaccaaacacattagactaactgctgcctta
acgttaaagaacatcgccaagtactctgattgtggacggaagatggtgaagcggcatgag
aatcatctctctgtgctggcgctgagcagtatggaggtctccaccacactcgctaaatgc
ctttacgaactcacgcgctctctgcaggcctga
DBGET
integrated database retrieval system
