Desmodus rotundus (common vampire bat): 112310196 Help Entry 112310196         CDS       T05907                                  Symbol LIG1 Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism dro  Desmodus rotundus (common vampire bat) Pathway dro03030   DNA replication dro03410   Base excision repair dro03420   Nucleotide excision repair dro03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dro00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     112310196 (LIG1)    03410 Base excision repair     112310196 (LIG1)    03420 Nucleotide excision repair     112310196 (LIG1)    03430 Mismatch repair     112310196 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dro03032]     112310196 (LIG1)    03400 DNA repair and recombination proteins [BR:dro03400]     112310196 (LIG1) Enzymes [BR:dro01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      112310196 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      112310196 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      112310196 (LIG1) DNA replication proteins [BR:dro03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     112310196 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      112310196 (LIG1) DNA repair and recombination proteins [BR:dro03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      112310196 (LIG1)    NER (nucleotide excision repair)     Other NER factors      112310196 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      112310196 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR Motif Other DBs NCBI-GeneID:  112310196 NCBI-ProteinID:  XP_024422215 LinkDB All DBs Position Unknown AA seq 919 aa AA seqDB search MQRTIMSFFHPKKEGKAKKPEEASNSIRETEPPPKVALKERNRAVPESESPVKRPGRRAA RVLCSDGEEEDEAIMPPKGQKPAPDSPPASPPSPVTVPESSPALSDSSPVRISPSGIPKR RTARKQLYKRTIQDVLEEHNKDKDRETKRKKAEEEAETPTESLPELEGAKEKEADEGGPP RMPSEPQNTCEAEAPPESSSEPEAREEDRVKPPARAPKTLSSFFTPRKPATKNEVKEVGP GTPRKEEPKGPSHLDVSSSPPDPGSYNPAKSSYHPMHDACWKQGQKVPYLAVARTFEKIE EVSARLRMVETLSNLLRSVVALSPPDLLPILYLSLNCLGPPQQGLELGVGDGVLLKAVAQ ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPALTASGVFARFRDIARLTGSAST AKKIEIIKGLFVACRHSEARFIARALSGQLRLGLAEQSVLAALAQAVSLTPPGQEFPPAV VDAGKGKTAEARKTWLEEQGMVLKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGIPL KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHFLEGGEVKIFSRNQEDNTGKYPD IISRTPKIKLPSVTSFILDAEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAF DLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDMDQIAEFLEQSVKDSCE GLMVKTLDVHATYEIAKRSHNWLKLKKDYLNGLGDTLDLVVIGAYLGRGRRAGRYGGFLL ACYDEDSEGLQAICKLGTGFSDEELEEHHRNLQALVLPTPRSYVQADGAVAPDHWLEPRM VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEAATTSAQVACLYRKQ SQIQNQQGADAESDREDFY NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaactatcatgtcatttttccaccccaagaaagagggcaaagcaaagaagcca gaggaggcatccaacagcatcagagagacagagccccctccaaaggtggcgctgaaggag cggaacagagcggtgcccgagagtgagtctccagtgaagaggccggggaggagggcggcc cgcgtcctgtgcagcgatggggaggaggaggacgaagccatcatgccccccaaaggccag aagcctgcgcccgactccccaccagcctcgccccccagtcctgtcacggttcctgagagc agccctgccctctccgactcgtctccagtacgcatctccccgtcggggatcccgaagcgt cgcacagctcggaagcagctttataaacggaccattcaggatgtcctagaggagcacaac aaagacaaggacagggaaaccaagaggaagaaggcggaagaagaagcagagaccccaaca gaaagtctcccagagctggaaggggccaaagagaaggaagcagacgaggggggcccgcct cggatgccctctgagccccagaacacctgcgaagcagaggcccccccggagagcagttcg gagcctgaggcccgggaggaggaccgggtgaagcctcccgccagagctcccaagacgctc agcagtttcttcaccccccggaagccggcaaccaaaaacgaagtgaaggaagtggggcct ggcaccccaagaaaggaggagcccaagggaccctcccacttggatgtgagctccagcccg ccggacccaggcagctacaatcctgctaagagcagctaccaccccatgcacgacgcctgc tggaagcagggccagaaggtcccttatctggctgtggcccggacattcgagaagatcgag gaggtttctgctcggctccggatggtggagactctgagcaacttgcttcgctccgttgtg gccctgtcacctccagacctcctccccatcctctacctcagtctcaactgccttgggcca ccccagcagggcctggagcttggcgtcggggatggtgtccttctcaaggcggtggcccag gccacaggtcggcagctcgagtctgtccgggccgaggctgccgagaagggcgatgtgggg ctggtggccgagaacagccgtagcacccagaggctcatgctgcccccgcccgccctcact gcctctggggtcttcgccagattccgagacatcgcccggctcactggcagcgcttctaca gccaagaagatagagatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg tttatcgccagagccctgagtggacagctgcgcctcgggctggcggagcagtcggtgctg gccgccctcgcccaggctgtgagcctcacgcctccaggccaagaatttcccccggccgtg gtggatgctgggaagggcaagacagcagaggccagaaagacgtggctggaggagcagggc atggtcctgaagcagacgttctgcgaggtgcccgacctggaccggatcgtgccggtgctg ctggagcacgggctggagcggctgccggagcactgccggctgagtccagggatccccctg aaacccatgttggcccaccccacccggggcgtcagcgaggtcctgaaacgctttgaggag gctgccttcacctgcgagtacaagtacgacgggcagagggcgcagatccattttctggaa ggcggagaggtgaagatcttcagcaggaaccaggaagacaacaccggaaagtaccctgac atcatcagccgcacccccaagataaaacttccgtcagtcacatctttcattctggacgcg gaagcagtggcttgggaccgggaaaagaagcagatccagccattccaagtgcttaccacc cgcaaacgcaaggaggtggacgcagcggagatccaggtgcaggtgtgtctatacgccttc gatctcatctacctcaatggagagtccctggtacgggagcccctctcccgacgccggcag ctgctgcgggagaactttgtggagacagagggcgagttcgtctttgccacctccctggac accaaggacatggaccagatcgctgagttcttggagcagtcggtgaaagattcctgcgag gggctgatggtgaaaaccctggatgtccacgccacctacgagatcgccaagaggtcgcac aactggctgaagctgaagaaggactacctgaacggcttgggtgacaccctggatcttgtg gtgatcggtgcctacctgggccgggggaggcgggccggccgctacgggggcttcctgctg gcctgctacgatgaagacagcgaggggctgcaggccatctgcaagcttggcaccggcttc agtgacgaggagctggaggagcaccaccggaacctccaggccttggtgctgcccaccccg cgctcctacgtccaggcagatggtgccgtggcccccgaccactggctggagccccgcatg gtgtgggaggtcaagtgcgccgacctctccctctccccgatctaccctgcagcccggggc ctggtggacagtgagaaggggatctcccttcgcttccctcggtttattcgtgtccgtgaa gacaagaagccagaggcagccaccaccagtgcccaggtggcctgtctgtacaggaagcag agtcagatccagaaccagcaaggtgcagacgcagaatccgaccgggaggacttctactag

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