Devosia rhodophyticola: PSQ90_13395
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Entry
PSQ90_13395 CDS
T09920
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
drp
Devosia rhodophyticola
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
WDR05275
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All DBs
Position
complement(2728988..2731420)
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AA seq
810 aa
AA seq
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MADGKLEKYRGKRNFAKTTEPTGTSDGGSNRFVVHKHSATADHYDLRLELGGVLKSWAVP
KGPSLNPADKRFAAATEDHPVDYLDFEGVIPAGEYGGGPMIVWDTGTWAPMGDPAIDLEN
GAFKFRLVGEKLRGGWMLARLKGKPNEGEKSNWLLFKERDQAMDIEGDILLDRPESVKSG
RLIEDLVATPTPSKKQAKPQPGKRVGAVKKPFPTSLKMQLASPADAPPRQGNWLHEIKFD
GYRTLAFLEGDTARLITRGGLDWTKRYGGLPAAFAKLNCREAVIDGEIVVLDDKGISRFG
KLQDALSNGAGNQLVFYAFDLLHLDGWDLRNVPLVKRKLLLAQLLSGHIDTRSAIQFSDH
VEGDGTPLFDHASDLGLEGIVSKRADSKHTDGRSKSWLKIKALKTGDFVIAGYSDSPANG
GIGALAMAEWVGDDLIYRGKVGTGFDAATIKSLADRLGTMRIEDPIEGAPREILPVKPML
KARIQYAAITSDGMLRHAVFKGLRETELTTAPTAPRQRIVSDADLAGIWVTNPTRRLFGK
SGPTKLEIAVYYAAVGDFMLPHLFGRPVSLFRCPTGKPQDCFFQRHPFTGMPATLASFPT
QNSEGEKQTYISIEDAKGYLALAQFGVVEFHAWGTHKSHLDKPDRVIFDLDPGEGIAWRD
VANAAVHLRAGLEAMGFVPFVKTSGGKGVHIVVPVTQKLGWKQTHSACAAIATKLATTGR
DTFVTTMGADNRKNRIFIDYHRNARSATAVAAYSLRARPHLPASTPLDWRDLESIDSPSD
LNYSTLPGLLTTSGDPWADINESERDLTPG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggccgatggcaaacttgaaaaataccggggcaaacgcaactttgccaaaacgacggag
cccaccggaacgtcggacggcggcagcaatcgcttcgtcgtccacaagcattccgccacc
gccgaccattatgatttaaggctggaactcggcggcgtcctcaagagctgggcggtgcca
aaaggcccgtccctcaatcccgccgacaaacgcttcgccgccgccaccgaagaccacccc
gtcgattatctcgatttcgaaggcgtaatccccgcgggggaatatggtggcggtccgatg
atcgtatgggacaccggcacctgggcgccaatgggtgacccggccattgacctcgaaaat
ggtgcgttcaaattccgactggtcggcgaaaagctgcgcggcggctggatgctggcgcgg
ctcaagggaaaaccgaacgagggcgaaaagagcaactggctccttttcaaggagcgcgat
caagcgatggatatcgagggagatattctgctcgaccgccccgaaagcgttaaatcaggc
cgcctgatcgaagatcttgtcgccacgcccactccgtccaaaaagcaagccaaaccccag
ccgggcaaacgtgtcggggcagtcaaaaagccgttcccgacttctctcaagatgcaattg
gcttcccccgcagacgccccgcccagacagggcaattggctgcacgagatcaaattcgac
ggctatcggactttggcgtttcttgaaggcgacaccgcccgccttatcacgcggggcggg
ctcgattggaccaagcgttacggcggcctcccggcggcctttgccaagctcaattgtcgc
gaagcggtcatagatggcgaaatcgtcgtgctggacgataaaggcatcagccgcttcgga
aaattgcaggacgcgctgtcgaacggggcaggcaatcagctggtgttttacgcattcgac
ctgctgcatcttgatggctgggaccttcgcaacgtgccgttggtcaagcgcaagctcctg
cttgcccaactcctatctggccacattgatactcgctcggccatccagttcagcgatcac
gtcgagggcgacggcacgccgctgttcgaccatgcctccgatctgggtttggagggcatt
gtctccaagagagccgacagcaaacacaccgatgggcgctccaagagctggctcaaaatc
aaggcgctcaaaaccggcgatttcgttatcgctggctatagtgatagtccggccaatggc
ggcatcggggcgctcgccatggccgaatgggtaggtgatgacttgatctaccgcggcaag
gtagggaccggttttgatgccgccactataaagtcgctcgcagatcggctgggcacgatg
cgcatcgaggatccgattgagggcgccccaagagagatcctaccggtcaagccaatgctc
aaggcgcgcattcaatacgccgcaatcaccagcgatggcatgcttcgtcacgccgtgttc
aagggtctgcgcgagaccgaacttacaacggcaccaacggcgccgcgccaacgcatcgtc
tcggatgccgatctggccggcatctgggtaaccaatcccacccggcgcctgttcggaaag
tccggccccaccaagctcgaaatcgccgtctattacgctgccgtaggtgacttcatgctg
ccccatttgtttggccgcccggtgtcgctgtttcgttgccccaccggcaaaccgcaggac
tgtttcttccagcgtcacccattcaccggcatgcccgcaacccttgcctcttttcccacc
cagaattcggaaggcgaaaagcagacctatatttcaattgaggacgccaagggctatttg
gcactggcccagttcggcgtcgtggaattccacgcctggggcacccataagagccatctc
gacaaacccgaccgcgtaatttttgatcttgatcccggcgaaggcatcgcctggcgcgac
gtagccaacgccgccgtccacctgcgcgctggtcttgaggccatgggctttgtgcctttt
gtcaaaacctctggcggcaagggcgtccacattgtcgtccccgttacccaaaaactgggt
tggaagcagacccactctgcctgcgccgccatcgcgacaaagctcgccaccacgggccgc
gacactttcgtcaccacaatgggcgccgacaatcgcaagaaccggattttcattgattat
catcgcaatgcgcgcagcgccactgccgtagcggcctattccttgcgcgcccgcccccac
ctgcccgcttcaacgccgctcgattggcgcgatctggagtccatagactctccatcggac
ctgaattactctacacttccgggtttattaaccacttctggcgacccctgggccgacatt
aatgagtccgaacgggatttgacgccaggatag
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