Desulfovibrio subterraneus: LN040_00985
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Entry
LN040_00985 CDS
T08953
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN040_00985 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsb03019
]
LN040_00985 (groL)
03110 Chaperones and folding catalysts [BR:
dsb03110
]
LN040_00985 (groL)
03029 Mitochondrial biogenesis [BR:
dsb03029
]
LN040_00985 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsb04147
]
LN040_00985 (groL)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LN040_00985 (groL)
Messenger RNA biogenesis [BR:
dsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LN040_00985 (groL)
Chaperones and folding catalysts [BR:
dsb03110
]
Heat shock proteins
HSP60 / Chaperonin
LN040_00985 (groL)
Mitochondrial biogenesis [BR:
dsb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LN040_00985 (groL)
Exosome [BR:
dsb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LN040_00985 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LN040_00985 (groL)
Exosomal proteins of breast cancer cells
LN040_00985 (groL)
Exosomal proteins of colorectal cancer cells
LN040_00985 (groL)
Exosomal proteins of bladder cancer cells
LN040_00985 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
Cas_APE2256
Motif
Other DBs
NCBI-ProteinID:
WBF67716
LinkDB
All DBs
Position
215017..216651
Genome browser
AA seq
544 aa
AA seq
DB search
MAKEILFDAKARERLSRGVDKLANAVKVTLGPKGRNVVIEKSFGSPVITKDGVSVAKEIE
LEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAVYKEGVKLVAAGRNPMAIKRGID
KAVESLVAELNALAKPTRDQKEIAQVGTISANSDTTIGNIIAEAMNKVGKEGVITVEEAK
GLETTLEVVEGMQFDRGYLSPYFVTNADKMIVEMDSPLILICEKKISNMKDMLPVLEQVA
KMSKPLVIIAEDVDGEALAALVVNKLRGTLQVAAIKAPGFGERRKAMLQDIAILTGGQVV
SEEMGVKLENITVADLGSAKRVVVDKENTTIVDGAGKGEDIKARVKMIRAQVEETSSDYD
REKLQERLAKLVGGVAVINVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVR
VATVLDDIKPADDDEAAGVAILRRAIEEPLRQIAANAGFEGSIVVEKVREGKDGFGFNAA
TGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPSDKPAAPAMPGGMGGM
GGMY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattctgtttgacgcaaaggctcgtgagcgcctttcccgcggtgtagat
aagcttgccaacgccgttaaggttacccttggacctaagggccgtaacgttgttatcgaa
aagtccttcggttcccccgtcatcaccaaggacggcgtttccgtagcgaaggaaatcgaa
ctggaagacaagttcgagaacatgggcgcacagatggtaaaggaagttgcctccaagact
tccgacatcgccggcgacggtaccaccaccgccaccattcttgctcaggctgtttacaag
gaaggcgtgaagcttgttgctgcaggccgtaaccccatggccatcaagcgcggcatcgac
aaggctgttgagtccctcgtggctgaactgaacgcccttgcaaagcccactcgcgaccag
aaggaaattgctcaggttggtaccatttccgccaactccgacaccaccatcggcaacatt
attgccgaagctatgaacaaggtcggcaaggaaggcgttatcaccgttgaagaagccaag
ggcctcgaaaccactcttgaagttgtggaaggcatgcagttcgaccgcggttacctgtct
ccctacttcgtgaccaacgcagacaagatgatcgtggaaatggattcccccctgatcctc
atctgcgaaaagaagatttccaacatgaaggacatgctccccgtgctggagcaggtcgcc
aagatgagcaagcccctcgtcatcattgctgaagacgttgacggcgaagctcttgccgct
ctcgtggtgaacaagctgcgtggtaccctgcaggttgcagccatcaaggctcccggcttc
ggcgaacgccgcaaggccatgctgcaggatatcgccatcctcaccggtggtcaggttgtt
tccgaagaaatgggcgttaagcttgagaacatcaccgtggcagacctcggttccgccaag
cgcgtggttgttgacaaggaaaacaccaccatcgttgacggcgcaggcaagggcgaagac
atcaaggcccgcgtaaagatgatccgcgctcaggttgaagaaacttcttccgactacgat
cgtgaaaagctgcaggaacgtctggccaagctggtcggcggcgttgcagtgatcaacgtc
ggcgctgctaccgaaaccgaaatgaaggaaaagaaggaccgcgttgaagacgctctgaac
gcgacccgtgcagccgttgaagaaggcatcgtgcctggcggcggtaccgctctggttcgc
gtggccaccgttcttgacgacatcaagcccgctgacgacgatgaagcagccggtgttgcc
attctgcgtcgcgccatcgaagaaccccttcgtcagatcgccgctaacgccggcttcgaa
ggttccatcgttgtggaaaaggttcgcgaaggcaaggacggcttcggcttcaacgctgct
accggcgaatacgaagacctcatcaaggccggtgttatcgatcccaagaaggttacccgc
attgccctgcagaatgctgcttccgtagcatccctgctgctcaccaccgagtgcgccatt
gccgagaagccttccgacaagcccgctgctccggctatgcccggcggcatgggcggcatg
ggcggcatgtactaa
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