Desulfovibrio subterraneus: LN040_05070
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Entry
LN040_05070 CDS
T08953
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
LN040_05070
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
GCIP_N
Motif
Other DBs
NCBI-ProteinID:
WBF68478
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All DBs
Position
1083919..1087038
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AA seq
1039 aa
AA seq
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MDFIRFSIRKPVAVFVGVILVVMFGTIGLLSMPYQLSPTVTEPEITVTTDWSGATPYEVE
RDIIEEQEKVLKGLPNLITMESTASSGRGQITLRFKIGTDTDNALLRVSNKLNEVQSYPL
NVDKPIISATGESSSPVIWLVLKTLPDNPRPAEQYRTFFENEVRQYLERVDGVSDLFVFG
GTEREMQVIVDPRKLAAHNLTITDLITVLRTENANTSAGTLDLGRRQYRIRTIAEFNSPE
SILNTVISSSGARRITVGDVADASYGYAKHTTAMMHNGEGGIVCGIRSEAGANVLTMTDS
VEAAVSELNAGILKNNGLRMDWSYDQRPYINGAIDLVKENIMIGGVLAIVVLLVFLQSVT
STVVVAVAIPISVVGTFIFMNALGRNLNVVSLAGISFAVGMLVDNAIVVLENIDRHRSMG
KTPFRATYDGTSEVWGAVVASTLTTVAVFLPVAFIEEEAGQLFKDIAIAVTCAITLSLFV
SVSVIPMLANLFFSMSRKRATGKKLFPFVDALGKRVADAFMSLVRLAIRNTVTRLATIAL
LTAVSVFITWAAFPKMEYLPQGNRNLVLNILIPPPGLSYEERKDIGDYIQSTYRPLYTSD
TDVNGLPPIDALFYVGAADFMLFGTTSKVEDRAGEYIPEFTRTIRSIPGMYGVSMQAGIF
QDNIGKGRTIEVDLSAGDIDKLVGGAGALFGTLMQAIPGAQIRPVPSLELLFPEVRLHPE
RDRLKAAGLTSSELGIAVDVLMDGRKIGDFNEEGKKKIDLVVKADDRDVLSPEDLYHSLV
ATPTGIPVPVSSLAALERTNGITQIRHLERQRTITLQVTPPQSMPLEQAMDIIRDDTIPK
LQQGPLAGITYRLSGAADKLTQTRQALQWNFLLAVAITYLLMAALFENFIYPLIILFTVP
LASAGGILGLKLENLFIAQQPMDILTMLGFIILIGVVVNNAILIVHQALNNIREGGMQHR
EAVLESVRTRLRPIYMSATTSVFGMLPLAVAPGPGSELYRGLGSVVLGGLALSTIFTVFV
IPALLLFVIGMEKPASSDD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggacttcatccgcttttccatacgcaagcctgttgcggttttcgtcggcgtaatcctt
gttgtcatgttcggcaccatcggcctgctgagcatgccctaccagctcagccccacggtc
acggaacctgaaataaccgtgacaacggactggagcggcgccacgccctatgaggtcgag
cgggatatcatcgaagaacaggaaaaggtgctcaaggggctgcccaaccttattaccatg
gaatccactgcttccagcggcagagggcagatcacactgcgcttcaagataggcacggat
acggataacgccctgctccgcgtctccaacaagctcaacgaggtgcagagctatccgctc
aacgtggataagcccatcatcagcgccacgggtgaatcctcatcgcctgtcatctggctt
gtgctgaaaaccctgccggataaccccagacccgccgaacagtaccggaccttctttgaa
aacgaggtgcggcagtatctggagcgcgttgacggcgtctcggatctgttcgtcttcggc
ggcacggaacgcgagatgcaggtcattgtggacccgcgcaaactggcagcccacaacctg
accatcaccgacctcattacagtgctgcgcacggaaaacgccaacacctcggcaggcacg
ctcgatctgggccgcaggcagtaccgcatccggacaatcgcggaattcaactctccggaa
tccatactgaacaccgtcatatcctccagcggagcacggcgcataaccgtgggggatgtg
gcagatgcctcttacggctatgccaagcacaccacagccatgatgcataacggcgagggg
ggcattgtctgcggcatacggtcagaggcgggtgccaacgtcctgaccatgacggacagc
gtggaggctgcggttagcgagctgaatgcgggcattctgaaaaacaacggcctgcgcatg
gactggtcctacgaccagcgcccctacatcaacggcgccattgatctggtaaaagaaaac
atcatgatcggcggggtgctggccattgtggttctgctggtcttcctgcagtcggtcaca
tccaccgttgtggtagccgtggccattcccataagcgtggtaggcaccttcatcttcatg
aacgcgctgggccgcaacctcaacgtggtgagccttgcgggtatctcctttgccgtgggt
atgctggtggacaacgccattgtcgtgctcgagaatatcgaccgccaccgcagcatgggc
aaaacacccttccgcgccacctatgacggcacatcagaagtgtggggagcggttgtggcc
tccaccctcaccaccgtggccgtattcctgcccgtggccttcatcgaggaagaagctggc
cagcttttcaaggatatagccattgccgttacctgcgccataacgctcagcctgttcgtt
tccgtctcggtcatccccatgctggccaacctgttcttttccatgagccgcaaacgggca
acgggcaaaaaactctttcccttcgtggatgctctcggcaagcgcgttgccgatgccttc
atgtcgctggtacggcttgccataagaaacacagttacacggcttgccaccattgcgctg
ctcaccgcggtttccgtcttcatcacctgggcggcctttcccaagatggaatacctgccg
cagggcaaccgcaacctcgtgctgaacatcctcataccgcctccgggcctttcgtatgag
gaacgcaaagacataggcgactatatccagagcacctaccgtccgctctatacctcggat
acggacgtgaacggattaccgcccatagacgccctgttctatgtgggtgcggccgacttc
atgctctttggcaccacatccaaggtggaagaccgcgcaggtgaatacattccggaattc
acccgcaccatacgctccattcccggcatgtacggcgtttccatgcaggcgggcatattt
caggacaacatcggcaagggccgcaccattgaagtggacctttccgcaggcgacatcgac
aaactggtcggcggggcgggcgcactcttcggcacgctcatgcaggccattcccggcgca
cagatacgccctgttccctcgctggaactgctctttcccgaagttcgcctgcacccggaa
cgcgaccggctgaaggcggcggggctcacctcttccgaactgggcatagcggttgacgtg
ctcatggacggccgcaagataggcgacttcaatgaagaaggaaaaaagaagatagatctg
gtggtcaaggcggacgaccgcgacgtgctctcgcccgaagatctgtaccactcgctggtg
gccacgcccaccggcatacctgttcccgtgtcttcgcttgcggcattggagcgtaccaac
ggcattacgcagatacgccaccttgaacgccagcgtaccatcaccctgcaggtcacaccg
ccccagagcatgcctctggaacaggctatggatatcatccgtgacgataccattcccaag
ctgcaacagggaccgcttgccggaatcacctaccgtctttcaggcgctgcggacaagctg
acccagacccggcaggcactgcaatggaacttcctgctcgccgtggccattacctacctg
ctcatggctgcgctgttcgagaacttcatttatccgctgatcatcctgttcacggttccg
ctcgcctccgcagggggaattctgggactgaagcttgagaacctgttcattgcccagcag
cccatggatattctgaccatgctcggcttcatcattctcatcggggtggtggtgaacaac
gccatcctcattgtgcatcaggcgctgaacaacatccgcgagggtggcatgcagcacagg
gaggccgtgctggaatcagtgcgcacaaggttgcgccccatctacatgagcgcgacaacc
tcagtcttcggcatgctgccgcttgccgttgctcccggccccggttcggaactctaccgg
ggactcggttccgtggtgctgggcgggcttgccctttccaccattttcacggtcttcgtc
attcccgcactgctgctctttgtcattggcatggagaaacccgcctcttccgacgactga
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