Desulfovibrio subterraneus: LN040_11185
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Entry
LN040_11185 CDS
T08953
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb01501
beta-Lactam resistance
dsb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN040_11185
01503 Cationic antimicrobial peptide (CAMP) resistance
LN040_11185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_11185
01504 Antimicrobial resistance genes [BR:
dsb01504
]
LN040_11185
Transporters [BR:
dsb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LN040_11185
Antimicrobial resistance genes [BR:
dsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LN040_11185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Motif
Other DBs
NCBI-ProteinID:
WBF66294
LinkDB
All DBs
Position
complement(2537326..2540460)
Genome browser
AA seq
1044 aa
AA seq
DB search
MAAFFINRPIFAWVIAIVIMLAGVLALGRLPVAHYPDIALPQISISAQYPGASASIVDRS
VTQIIEQQLKGLDNLLHMSSTSGSSSGSEINLTFTAGTDIDTAQVQVQNKLQQAMSLLPE
AVQRQGVQAFKAVENSFMTVALYDARNMMRASDISDYVASSLVDPLSRIQGVGSVTLYGS
QNAMRIWCDPDKMRQYRLNPQDVLTAIREQNSQVAGGQVGESPAPPGQEINIAINASSSL
ETVEQFEQILLRVEENGAVLLLKDVARIELNEESATGGTYFNGHAGTGLSFKLSSGANVL
KTTQAIKAELEALAAFFPPGLTYAYAEDKAPIVEKSIQSVVRTLLEAIALVVVVMFLFLQ
SFRATLVSAIAVPVVLLGVFAVLAVAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERLM
REEKLSAREAALKSMRQITGALVGVAVVISAVFIPMAFISGSTGSIFRQFSITIVASMVL
SVVVAIVLTPALCATILTVKTHRAEAGVFGRFNRWFDALTGRYAIQVAGIVKRPKTWTTT
VVFVVAMCAVLFSRLPDSFLPDEDQGILYVDVQLPSGASQERTEKIVKEIDEYFRTEEKD
AIQSVMSVVGWGFSGSGQSSAMVFPLLKDWSERGQGQGVFDVMERASARFSSIHGADIVV
MAPPAAMDLGTSSGFEMELMDRGGNGRAALLKAKDALLEDVAKRPSVSYARYGGMEDAEQ
YDLLINNGKAGAYGLSRGDINNAISAYWAGEYINDFSDRGRTKKVYFQAEPSFRTGVDDF
RRYYLRNAKDEMVPFSNFLAVKSGLASPSLTRYQGIPSVKIEGAAVQGKSSGQAMLEMEE
SAAKLPSGFDYAWTGLSYQQRMASNQAPLLYVISIIVVFLSLAALYESWTIPLAVLMAVP
TGVIGALGGVYLRGMNNDIYFQIALLTIVGLSAKNSILIVEFARALHHEGKDLLTATVEA
SRLRLRPVLMTSLCFILGVVPLAFSTGAGSAAQNALGTAVMAGMITATGLGVYYTPLFFV
LVTRLFGRKKGHEHAPASSTVPNA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttctttatcaatcgccctattttcgcctgggttatcgccatcgtcatcatg
ctggccggagtgcttgccctgggcaggcttccggtggcccattatccggacatagccctg
ccgcagatatccatttccgctcagtatcccggagcctccgcgtccattgttgaccggagc
gtaacacagattatcgagcaacaactcaagggactggacaacctgctgcacatgagctcc
accagcggctcttccagcggttcggagattaatctcacgttcacggccggaacggatata
gatacggcacaggttcaggtgcagaacaagttgcagcaagccatgtccctgctgcctgaa
gcggtgcaaaggcaaggagttcaggccttcaaggccgttgagaactctttcatgaccgtt
gccttgtatgacgcccgtaacatgatgcgggcaagcgacatcagtgattacgtggcgagt
tcccttgttgatccgttaagccggattcagggagtgggttctgtcactctctatggctct
cagaacgcaatgcgtatctggtgcgatcccgacaaaatgcggcagtacaggctgaatcct
caggacgttctgaccgctatacgtgaacaaaattctcaggttgcaggcgggcaggtgggc
gaatcacccgctccccccggtcaggaaataaatattgccatcaatgcctcctcgagtctg
gagaccgtggagcagtttgagcaaatacttctgcgcgtggaagagaacggggcagttctg
ttgctcaaggatgttgcccgcatcgagctcaatgaagaaagcgcaactggcgggacctat
tttaacggccatgcgggaacagggttgtcattcaaactttcctccggagccaacgtcctg
aaaaccactcaggccatcaaggccgaactggaagcgcttgccgcctttttcccgccgggg
ctcacttacgcctatgccgaagacaaggcgcccattgtagaaaaatccatacaatcagtt
gttcgcactcttctcgaggccatagccctggtcgtggtggtgatgttcttgttcctgcaa
agcttccgcgccacgcttgtttcggccatcgctgttccggtagttttgctcggtgtattt
gcggtgctggcggttgccggtttttccatcaacacgctgaccatgttcggcatggttctg
gctatcggcctgctggtcgatgatgccattgtcgtggttgaaaacgtggaacgcctgatg
cgggaggagaaactctctgcccgagaagccgcgctcaaatccatgcgccagataaccggg
gcacttgtcggcgttgccgtggttatttccgccgtgttcattcccatggctttcatatct
ggttcaacaggctctattttcaggcaattctccattaccatcgttgcctccatggtgctt
tccgttgttgtggccattgtgcttacaccggctttgtgcgccaccatcctgacagtaaag
acgcacagagcggaggctggtgtgttcggcagattcaacaggtggttcgacgcgctcacc
ggacggtacgccattcaggtggctggtattgtgaaacggcccaaaacgtggacgaccaca
gttgtctttgtggtcgcgatgtgcgcggtgttgttctcgcgcctgccggattcctttttg
cccgacgaagatcagggaatcttatatgtcgatgtgcagcttccgtccggcgcatcacag
gagcgcaccgagaaaatagtcaaagaaatcgatgagtatttccgcactgaggagaaagat
gccatccaaagtgtcatgtcggttgtggggtggggcttcagtggctcaggccagagttcg
gccatggtgttccccttgctgaaggactggagcgaacggggacaggggcaaggtgtcttt
gatgttatggagcgggcttccgcccgtttttcgtccattcatggtgctgacattgtcgtt
atggcaccaccggctgccatggatctcggcacgtcctcaggctttgaaatggagctgatg
gatcgcggaggcaacggccgtgcggctctgctcaaagccaaggatgctctgctggaagac
gtcgcgaaaaggccctccgtctcctacgcccgttatggcggaatggaggacgcagagcaa
tatgaccttctgattaataatggaaaagcaggcgcatacggcctttccagaggggacatt
aataacgccatcagcgcatactgggctggggagtatatcaacgacttttcggaccggggc
agaacgaaaaaggtgtattttcaggctgaaccatcgtttcggaccggcgtggacgacttt
aggcgctattacctgcgcaacgccaaagatgaaatggtgccgttcagcaactttcttgct
gtgaagtcgggtttagcctcgccaagcctgacgcgctaccaagggattccatccgtgaaa
atcgaaggggccgcagttcaagggaaaagttccggacaggcgatgctggaaatggaagaa
agtgcggcaaaactgccttccggttttgactatgcatggacgggcctttcataccagcag
cgcatggcctccaatcaggctccactgctgtacgtcatttccatcatcgttgtctttctg
agccttgcagcgttgtacgaaagttggacgattccgctggcggtgctcatggcggtcccc
acaggcgtaattggagccctaggtggggtgtaccttcgcggcatgaataacgacatctat
tttcagatagccctgctcaccatcgttggcctgtccgccaagaactccatcctgatagtg
gaattcgcaagagctttgcaccatgaggggaaagatctgctcacggccaccgtggaagct
tcgcgtctccgtttgcggcccgtgctcatgacctcgctgtgcttcattcttggtgttgtg
cctttggccttcagcaccggtgccggttccgctgcgcaaaacgccctcggaacggctgta
atggcgggtatgatcaccgcaacggggctcggtgtttactacacaccgctgttcttcgtt
ctggtgacccggctgtttgggcgaaaaaagggtcatgaacatgctccggcctcatcgacg
gttcctaacgcataa
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