Drosophila sechellia: 116800360
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Entry
116800360 CDS
T01064
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116800360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
116800360
03019 Messenger RNA biogenesis [BR:
dse03019
]
116800360
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116800360
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116800360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
116800360
NCBI-ProteinID:
XP_032570666
LinkDB
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Position
2L:849947..851076
Genome browser
AA seq
296 aa
AA seq
DB search
MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITRNGQECDKGSACPFR
HIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQ
SKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGPSCKHMHPHFELPPLAELG
KDQLHKKLPTCHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGGHSGGYSGHSGHNEGA
EDMQSNHHSQPHGPGFVKVPTPLEEITCYKCGNKGHYANKCPKGHLAFLSNQHSHK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggacatacttttggccaacgtgagtgggctgcagttcaaggctgagcgggacctcatc
gagcaggtgggcgccatcccgctaccgttctacggcatggacaagtccatcgcggcggtc
tgcaacttcatcaccaggaacgggcaggagtgcgacaaagggagcgcctgtcccttccga
cacattcgcggggacaggacgatcgtgtgcaagcactggctgagaggactgtgcaagaag
ggcgaccagtgcgagttcctgcacgagtatgacatgaccaagatgcccgagtgctacttc
tactcgaggttcaacgcctgccacaacaaagagtgcccctttctgcacatcgacccgcag
agcaaggttaaggactgtccctggtacaagagaggcttctgccgacatggtccccactgc
cggcaccagcatctgcgccgtgtcctgtgcatggactacctagccggcttctgccccgag
ggcccgtcctgcaagcacatgcatccccacttcgagctgcccccactggcggaactgggt
aaggatcagctgcacaagaaactgcccacgtgccactattgcggcgaactgggccacaag
gccaactcgtgcaagcagtatgtgggcagcctggagcaccgcaacaatatcaacgctatg
gatcattccggcggacactcgggcggctactctggacactccggccacaacgaaggcgcc
gaagacatgcaatccaatcaccacagtcagccgcatggtcccggcttcgtcaaggtgccc
acgcccctggaggagatcacctgctacaagtgcgggaacaagggccactacgcgaacaag
tgtcccaagggccacctcgccttcctctccaaccaacatagtcataagtag
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integrated database retrieval system
