Drosophila sechellia: 6605432
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Entry
6605432 CDS
T01064
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6605432
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
6605432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
6605432
NCBI-ProteinID:
XP_002030265
UniProt:
B4HFM0
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All DBs
Position
3L:complement(12089991..12095812)
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AA seq
1216 aa
AA seq
DB search
MFKKLKPGESEEDVLRMAAEFNAERAKDPNFQPAAAFVRMDKAPKKSMFAQRREQAKLGR
VTSTTAKNEEQIQPVHKIIIPEIPTSVSKERGTHVSQVLLDEIQENILGDVKGSKMDPNS
LGNVLGELVERTKGTRRSALPDSKKVDSGKPLSIFAKKLLGAKSVNEEKSKKESDSPRND
TSSIIKDAKLGKELHQENLNVLNQMNEQDILVEKERLLASLDPSLIALLSKKRQATPNSK
PPNPNSPKIIEAPPMPTQSTRAQDPQISSLTDGNPAIELLQESDKGNWVNFNLVEEHKLA
WMRDIPAKISELKPGEQFNARFDWKGVLLPHTLKDQDASKQIDERELYLHGEEADRPGYA
LQELFRLARSTVLQQRLSAFGAIAGIFSIYNQGFYDQVLSLPISKIFFLLRFGLDDNAPA
QLEVVSRALSNLFYNETDEVLLDHVQDNAYCHWQPTLEVLGNGSDGKGEDTDTNSIAFLQ
RYMKLLTTSKSVRAEVDDDESESRTSMDDFQLAETDLMDCLLRTNILQRIRFILDSVKPD
NSTVESCLKLLIRIARTSTKVARQLANESHLLDTLFKHFLPSSSGSNQFYGQPQVLFLKL
IRVLTCQHLDIAKGISKGVLIGRLQQYLFLQDNKVQMVRVQIEALRILRCLLLLGIVDRD
IFRQFLPALRQLLDWHGNHCAFDGVGGSGLVRQHAAALLVALVASGESGACDVEGQKLLV
EPLNNCCCGWMHAASRVAKIKDFSQMTLLSAALYAVGWFSRNSLLGTTSLLPFLRSILPK
FVQSSGFIACVHDLVKGSIMLRRPIDRRHVHAALPNVGAVLMHDYGPQLVVSETYPVHLL
SNLWALLAVSLESGEKPLLAALIQPAVLEPLAEYLRQLSTQLNRVLATNFFARSELRLIH
QLLTTDGIEIYLERQQMLQLVYNYLCCLSTAHATQIKSVFERFIFNGDFVKLDESSLKLL
QQSCLEMVYPHIIADNSEPSLSLSYTQAPILPADWPFFQLRVILSNYLQNVQQRPAAIHS
ENQVVRMTLTFVRQLEREGLQIVSPLEKLMYLMIAFMGPDSQFLAPDLHELLRDCLMDFY
RENAGHVFDFDAELVDKARFEPLYYLFVEHFEAASYGDELFSSLVLVPLAQKYDNKWRRR
LWSEHVQAVRFINCDEALLMGGLSAYLEPVEEEPSLVKLYGDALAQKMVRPGSIAYRIAQ
HHFNHSTSVHKATLFS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaactcaagccaggtgaaagtgaggaggatgtcctgcgaatggcagcagag
ttcaatgcagagcgagcgaaggatcccaatttccagcctgcagcggcttttgtgcgcatg
gataaagctcctaaaaagtccatgtttgcacaaaggcgagagcaggcaaaattgggacgt
gttacttctactacggcaaaaaacgaggagcaaattcaaccagtgcacaaaataatcatc
ccagagattccaacaagtgtctcaaaagaacgtggaacgcatgtcagccaagttcttctc
gatgaaatccaggaaaacattctgggcgatgtgaagggcagcaagatggatccaaattcc
ctaggcaatgtgctgggcgaattggtagaaagaactaaaggaaccaggagatctgccctc
ccagattccaaaaaggttgattccggcaagccgcttagcattttcgccaaaaaactttta
ggtgctaagtctgtaaatgaagaaaaatcaaagaaagagtcggattctccaagaaatgac
acaagttccataataaaagatgctaaactgggaaaggaactgcatcaggaaaacctaaat
gtactcaatcaaatgaatgaacaagatattttggtagagaaagaaagattgctggcttct
ttggatccttcgttgatagctttgttgtcgaagaaacgccaagccacgccgaattccaag
ccgcccaacccaaattcaccaaagattatagaagcaccacccatgcccacccagtctaca
agagcccaagatccacaaatttcttctttaaccgatggcaatccagcaattgagctattg
caagagagcgataaaggaaattgggttaatttcaatctcgtcgaggagcataaattggcg
tggatgcgggatattcccgccaagataagtgaattgaagcctggagagcagttcaatgct
cgttttgattggaaaggtgtgctcctgcctcacacgctcaaggatcaggatgcatcgaag
caaatcgatgagcgagaactttatttacacggcgaggaggcagatcgacctggctacgca
ctacaagagctgtttcgattagccagatccaccgtcttacagcaaagactatctgccttt
ggagccatagctgggatctttagcatctataaccagggattctatgatcaagtcttgtct
cttcccatatcaaaaatattctttttgctgcgttttgggctcgatgacaatgcacctgca
caacttgaggttgtaagccgagctctatccaacctgttctataacgaaaccgacgaagtg
cttctcgatcatgttcaagacaatgcctactgtcattggcaaccaaccttagaggttttg
gggaacggcagtgatggcaaaggggaagatacagataccaactccatagcattcctgcag
cgttacatgaagctactgaccaccagtaaatctgtgcgtgcagaagtggatgatgatgaa
tcggagagtcgcacgtccatggatgactttcaactggctgaaacagatctcatggactgc
ctgcttagaacaaatatattgcaaagaattcgcttcatcttggactctgtgaaaccagat
aatagcactgtagagtcctgcctgaaattacttataaggatagctcgtacaagtaccaaa
gtggctcgtcagctggccaatgaaagccatcttttagatacactctttaaacattttcta
ccctcttcgagcggaagcaatcagttttatggccagccgcaagttctatttctaaaacta
attcgagtgttgacttgccaacaccttgatatagctaaaggtatttccaaaggagtcctg
attgggcgacttcaacaatacctgttccttcaagacaataaggtccagatggtgcgcgtt
cagatcgaggcactgcgcatcctgcgctgtttgctgctcttgggaatcgtggatcgggat
atattcagacagttcctgcccgcgctgcgacagctactggactggcatggcaatcactgc
gctttcgatggagtgggcggatccgggctggtgcgccaacacgcagccgccctgctggtc
gcactggtggccagtggcgagagcggagcatgcgacgtcgagggacagaagctgctcgtg
gagccgcttaacaactgctgctgcggctggatgcatgctgcttcccgcgttgcgaagatc
aaagatttcagccagatgacgcttctgagcgctgctctgtacgctgtaggctggttttct
cggaacagcttgttgggaaccaccagtttattgccttttctgcgcagcatacttccgaaa
tttgtgcaatccagcggatttatagcttgcgtacatgacctagtcaagggctccataatg
ctgagacgccccatcgatcggcgccacgtgcatgcggcgttgcctaacgtgggcgcagtg
ctgatgcacgactacgggccgcagttggttgtcagtgagacgtatccggtgcacctgttg
agtaacctgtgggccctgcttgccgtttcgctggagagcggcgagaaaccattgctcgcg
gcgctaatacaaccggcggtgctcgagcctctggccgaatatctgcgccagctgagcacc
cagctgaatcgcgtcctggccaccaacttctttgcccgcagcgagttgagattaatccat
cagctgcttacaacagatggaatcgagatctatctggagcgacagcagatgctgcagttg
gtgtacaattacctatgctgcctgtccactgcccatgccacgcagatcaaaagcgtcttt
gagcgcttcattttcaatggcgactttgtcaaattggacgaatctagtctgaaactgctg
cagcaatcgtgtctggagatggtgtatccccacatcatagctgacaactcggagccgtcg
ctatccttgagctacacacaagcgcctatcctgcccgcggactggcccttctttcagctc
cgggttatcctcagcaattacttgcaaaatgtgcagcagcgtccagcggctatacactca
gaaaaccaggtggtccgcatgacgttgactttcgttcggcagttggaacgagagggactg
cagattgttagcccgctggaaaagcttatgtatctgatgatagccttcatgggcccggac
tcgcagttcctggctcctgatttgcatgagctgcttcgtgattgcctgatggatttctac
agggagaatgcaggccatgtattcgactttgatgcagaacttgtggataaggcgagattt
gaaccgctctactatctgtttgtggaacactttgaggcggccagctatggtgatgaactg
ttcagttctctggtgctggtgcctctggcacagaaatatgataataagtggcgaaggcgt
ctttggtcggagcatgttcaggctgtgcgtttcataaactgtgatgaagctttgctaatg
ggaggactgtctgcgtatttggagcccgtggaggaggagccttctttggtgaagctgtac
ggcgatgcattggcacaaaagatggttcgtcctggcagcattgcctatcgaatagcccag
caccacttcaaccactccacgtcggtgcataaagccacattgttttcataa
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