Drosophila sechellia: 6605796
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Entry
6605796 CDS
T01064
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dse
Drosophila sechellia
Pathway
dse03022
Basal transcription factors
dse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6605796
09124 Replication and repair
03420 Nucleotide excision repair
6605796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6605796
03400 DNA repair and recombination proteins [BR:
dse03400
]
6605796
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6605796
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6605796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
6605796
NCBI-ProteinID:
XP_002030611
UniProt:
B4HIG7
LinkDB
All DBs
Position
3L:complement(15208507..15210468)
Genome browser
AA seq
499 aa
AA seq
DB search
MADTKSGSGRNSAAGGSGNTVLSPLGQGPANLECKDFQEYLRTRQTPESLEKLYNYPPIC
LAVFRELPEIARQFIIRILFVDQPVPQAVVTSWGAQRCAKEQAEATSCLTALNVWRVTAI
PGGLSAWELSPTFKKSVRQVLLGGGKPWPMTNTLDKDSKPRDIAFLDTYAMSRWRCVLHY
MVGTGNRNGTDAEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFML
QYLDTCEERGISLPECLSMLFQLSFSTLGRDYSSEGMNSQMLTFLQHLREFGLVFQRKRK
EGRFYPTRLALNVTSKEAAATASVAMDEEATQDCGYIVVETNYRVYAYTDSPLQVAVLGL
FTELLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMRMVESAIHSKSCLP
PTVVDQIKLWELERNRFTYTEGVLYNQFLSHTDFVTLRDYAQSIHMLVWQNERTRTMVVQ
KNGHDDVKRYWKKYSKSGV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgaaatccggtagtggtcggaattcggctgccgggggaagtggaaacaca
gtcctgtcgcccttggggcagggtcctgcgaacttggagtgcaaggactttcaggagtat
ctgcgcacccgccaaacgccagagtcgttggagaagctgtacaactatccgcccatttgt
ttggccgtatttcgggagcttcccgagatagcccggcagtttatcataaggatactgttc
gtggatcagcctgttccacaagcggtggtcacatcatggggtgcccaacgttgtgccaag
gagcaagccgaggctaccagctgcctgacggctttgaacgtctggcgggtcacagccatt
ccgggtggcctttctgcgtgggagctctcgcccaccttcaagaaaagcgtgcgccaagtg
ctgctgggcggcggaaagccttggcctatgaccaacacgctggataaggactcgaagccc
agggacattgcttttctggatacatacgccatgtcccgctggcgctgcgtgttgcactac
atggtcggcaccggaaatcgcaatggcaccgatgcggaggccattagtccggatgccgtt
aggattctgctgcacgctaatctcatgaaacgggatgaacgagacggtatcacaataacc
cggcagggctttcagttcctgctgctggacacgcgagctcaggtgtggcattttatgcta
cagtacctggacacgtgcgaagaaagaggaatcagcctgccagaatgcttgtccatgttg
ttccagctcagtttttcaacgctgggcagagattacagttcggaggggatgaacagtcag
atgctgaccttcctgcagcatctacgggagtttggactagtcttccaacgtaaacgtaag
gagggacgcttctatcccacacgtttggctctgaatgtgacaagcaaggaggcggctgcg
actgcttctgtggccatggatgaggaggccactcaggactgtggctacatcgtggtggag
acgaactaccgagtgtatgcctacactgattctccactccaggtagccgtgttaggtctg
tttacggagctcctctaccgctttcccaatctcgtcgtgggcgtgctaacccgcgattca
gtgcgccaggcgttgcgtggtggtatcacggcggagcagattgtctcgtatctggagcag
tatgcgcatcccaatatgcgcatggtcgagtcagccattcactctaaatcctgcctgcca
cccacagtcgttgatcaaattaagctgtgggaactagagcgaaatcgcttcacctacacc
gaaggcgtgctgtacaatcagttcctctcgcatacagatttcgtaacgctacgagactac
gcccagtcgatccacatgctggtgtggcaaaatgagcgaactcgcacgatggtggtgcaa
aagaatggccacgacgatgtcaagcgttactggaagaaatactctaagagtggtgtttag
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integrated database retrieval system
