Drosophila sechellia: 6616609
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Entry
6616609 CDS
T01064
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dse
Drosophila sechellia
Pathway
dse03022
Basal transcription factors
dse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6616609
09124 Replication and repair
03420 Nucleotide excision repair
6616609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6616609
03400 DNA repair and recombination proteins [BR:
dse03400
]
6616609
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6616609
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6616609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
6616609
NCBI-ProteinID:
XP_002040966
UniProt:
B4IB56
LinkDB
All DBs
Position
3L:22307539..22309199
Genome browser
AA seq
438 aa
AA seq
DB search
MADDEQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAEIIQKAKRQRQAQKTKQNRLGM
MRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKRAEKV
TELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGSLTTC
DPVDINLTIDELKKEGIRCSVISLSAEIHVARYLTQQTMGTFGAVLDDAHFRDQLMSQVD
PPPAAKTQHNSLIRMGFPHTKNEVEGKDAPLSMCMCHIENLEEPSELTTTGHHCPQCNSK
YCELPVECQSCGLTLVSAPHLARSYHHLFPVPNFEELPFEAMPASSSEFTSDVRECYGCA
KALGQGVDKVADKVVFRCGFCKQFFCVDCDIFIHDTLHACVGCNTIPGVDGLVYQQSSKS
DQVDAHPGPSKQRGQFAM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatgagcaggaggaccagaaggagtaccgctgggaaacgggctatgaaaag
acatgggaggccatcaaggacgacgaggatgggatgctggatggagccattgcagagatc
attcagaaggccaaacggcagaggcaggctcaaaagaccaagcagaaccgcctgggcatg
atgcgccacatgttcgtcgtgctagattgttctgagtccatgagcgtgcctgatctgaaa
cccacacgcctgcggtgcaccgtcaagctgctggagctgtttatcgaggagttcttcgat
cagaaccccatcagccaattaggactgatagcgctaaaagctaagcgagcggagaaggtg
accgaacttaccggcacttcgcgcgtgcacctcaaagcgctagagagcctggctaacgtg
tccttgaccagcgagccgtcgctgcaaaatggcctagatctggcgctgaaatcgcttaag
gtggtgccatcgcacgcctcccgagagatcgtcattatcatgggctctctcaccacatgt
gatcctgtcgacattaacctcaccatcgacgagttaaaaaaggagggcatacgctgctcg
gttatttccctgtcggctgagattcacgtggcccgctacctcactcagcaaacaatgggc
accttcggggctgtcttggatgacgcccattttcgggatcaactaatgtctcaggtggat
ccaccgcccgccgccaagactcagcacaactcgcttattcgcatgggcttcccgcacacc
aagaacgaagttgagggcaaggacgcgccgttgtccatgtgcatgtgccacatagagaac
ttggaggagcccagtgaactgaccaccactggccaccactgcccgcagtgcaacagcaag
tactgcgagctgccagttgagtgccagtcctgcggcctcaccctggtctctgcgccgcac
ttggcgcgttcctaccaccaccttttcccggtgccaaactttgaggaactgccgtttgag
gcgatgcctgcttcgtcctccgaattcaccagcgatgtcagggagtgttacggctgcgcc
aaagccctcgggcagggcgttgacaaggtcgccgataaagtcgtcttcagatgcggtttc
tgcaagcagttcttctgcgttgactgcgacatcttcattcacgacactttgcacgcctgc
gtgggatgcaacaccattcccggcgtggacggcctggtttaccagcaaagttccaagtct
gaccaggttgatgcacacccagggccctcgaagcagcgcggccagtttgcgatgtaa
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