Drosophila sechellia: 6618438
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Entry
6618438 CDS
T01064
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dse
Drosophila sechellia
Pathway
dse03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
6618438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dse03400
]
6618438
Enzymes [BR:
dse01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
6618438
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
6618438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
DNA_ligase_IV
BRCT
Motif
Other DBs
NCBI-GeneID:
6618438
NCBI-ProteinID:
XP_002042708
UniProt:
B4IG48
LinkDB
All DBs
Position
X:complement(13506324..13509546)
Genome browser
AA seq
918 aa
AA seq
DB search
MSVDIASTIKFRDICGLFEKLKTTQKVVNKEEVLKSYYESFCRHRESFRRQTGLNDDQPE
DGASSFYSVLRLLLPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQHRTGTMYR
DYGDVVYSVLKPRCFNPPSNLRLNQIHQMLDTIANEDTEVKQQQLICFTEQASPEEQKWL
IRLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADQTTDLDASTSKDSKAA
VKFVNLNSVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYF
SRNGVDYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDV
KSLKPEGSWQPCFVVYDLLYFNGKSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSV
QEFNELFQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAF
YNRKRTFVDSFLLGVLQPAPPGSSNRPEVFSIGVVANNTKQRGVLNHTLKPHWHDVVNEP
PPLWFHYKPKERAGCPDLWIEPQNSVILQVKAADLAPNGAFFTRKSLHFPRTEMKRDDKP
WSECMTLKEFNDLCQGPLAIKKLNKRQLRLEDVTTKRKQMRMTPSERSRLGLAVYEKRYD
ASTSASTSKLFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDE
TFLVKRLILQQPRTCDIVRMEWLLRVCQKQELELRPRDLIAATEPLQQDLAECFDQHGDS
YTKDIANVEELQDLLEGIDLTADNVAGITASNLNALEDQLLDGKKNLNMFCHLNAFFYSP
HGDELAKLLFLQNGGRIVDDSDPELNLGFICMSSDIDNDHLEHWRQNHFKLSADKVLNSA
WIHQCHREGILLPMHSFI
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagatatagccagcacgatcaagttccgggatatctgcggcctgttcgagaag
ctgaagaccacccaaaaggtggtcaacaaggaggaggtcctcaagagctactacgaatcc
ttctgccggcaccgcgaatcctttcgccggcaaaccggattaaacgacgaccagccagag
gacggtgccagtagcttctattccgtgctacgactgctgcttccaggtgcggacacgggt
cgggatacctatggattgcagatcaccgcgctgggcaggctctacatcagggtgctccag
ctacccacggactccagcgatgccatcaggctgcagcaccgcaccggaaccatgtaccgg
gactacggcgatgttgtttattccgtgcttaagccaaggtgctttaatccgcccagcaat
ttgagactgaatcaaatccatcagatgctggacaccattgccaatgaggacacagaagtt
aagcagcagcaactcatctgctttacggagcaggcgtcgcccgaggaacagaagtggcta
atccggctgctgctgaaaagcctcgggctggggatcggtgagcaaaagatcttcggtgtg
ctgcaccccaaggcgcaggacatctaccagcgctgctccgatctgggacatgtgtgcaat
ctgctggcagaccaaaccaccgacctagacgccagcaccagcaaggacagcaaggcggcg
gtgaagtttgtaaacctgaattccgtcatacggccattccaccagatacgacccatgctg
tgcgaacgattcccgggtgacatccaggagctgatgcagtcggatgtgctctatctggag
accaaaatggatggcgaacgctttcagctgcacatcgatcggggtcgtttcatgtacttt
tcccgcaatggagtggactacaccaggaactttggccacagctacgatcacggcaccttg
acgccaaagctgaggggacttctgccgctgggcctggagtccatcatactcgacggcgag
atgatggtgtgggataccaacaaactgcgctttcgggaaaaaggcgagaatacggacgtg
aagagcctgaagccggagggcagctggcagccttgtttcgtggtatacgatctgctatat
tttaatggcaagagtctgttggaccatacctacattcagcgggcgtacaaattgcagaaa
ctcatagttgaacagtcgggtgtgctgcagttgatgcgtgcacgcaaaatcggttccgtc
caagagttcaacgagctgttccagcaggcactcgactcccacgccgagggcattgtgctg
aaaaagcagggatcaagatatcagcctggcgtaaggctgggcggtgggtggtacaaggac
aaggctgattacatcaaaggactgattaccgagttcgatgtgctgatcatcggagcattc
tacaatcgcaagcgcacctttgtggactcatttttactgggagttctccagccggccccg
ccaggcagctctaatcgtcccgaagtcttcagtattggagtggttgccaacaatacgaaa
cagcgcggagtgctaaatcacacactgaaaccacattggcatgatgtggtcaatgagcca
ccgccactgtggtttcactacaagcccaaggagagggccggatgccccgatctgtggatc
gaaccgcagaactcggtaattttgcaagtgaaggctgctgacctggcgcccaatggagca
tttttcacccgaaaatcgttgcactttccgcgcactgagatgaaacgagatgataagccc
tggagcgagtgtatgacactgaaggagtttaacgatctctgccagggtcctttggccatc
aagaagttaaacaagcggcaactgcgactagaggatgtgaccaccaagcggaagcagatg
cgtatgacgccctcggagcgaagccgactgggattggccgtctatgagaagcgctatgac
gcgagcacctccgctagcacttccaaactcttcgacggtctgagcttttgcatactgagc
ggatctgccggacgacacagcaagcatcagctgcaggagctggctgttaaaaacggtggc
tgcatcgtggagaatcccctgcccaatgatccaaagtgcttttgcatcgcaggcgatgag
acgtttttagttaagcggctcatccttcagcagccacgcacctgtgacattgtgcgcatg
gagtggctacttagggtctgtcagaagcaggagcttgaactgaggcctagagatcttatt
gcggccactgaaccactgcaacaggatctggctgaatgttttgaccagcacggtgatagc
tacaccaaagacattgccaacgtggaggagttgcaggatctgcttgaaggcattgatttg
acagctgataatgtggctggcataaccgcatctaacctaaatgctctggaggatcagctt
ctggatggaaaaaagaatctgaacatgttctgccaccttaatgcgtttttctatagtccg
catggtgatgaactggctaagcttctgtttcttcaaaacggcggccggatagtcgacgat
tccgatccggaacttaatctgggatttatctgtatgtcttctgacatcgataacgaccac
ttggagcactggcggcaaaatcatttcaagttgagcgctgacaaggttttaaactcggcg
tggatccatcagtgccatcgcgaaggcatcctacttcctatgcactctttcatctaa
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