Drosophila sechellia: 6620367
Help
Entry
6620367 CDS
T01064
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dse
Drosophila sechellia
Pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6620367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6620367
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6620367
Spliceosome [BR:
dse03041
]
Complex A
U2 snRNP components
U2 related factors
6620367
Complex B
6620367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
6620367
NCBI-ProteinID:
XP_032582203
LinkDB
All DBs
Position
X:15226534..15232110
Genome browser
AA seq
1219 aa
AA seq
DB search
MSKSSGRDRDRERDRERERERDRERERDRDRERDNRHDSRSRDYDMGKSRNGGGGGGSRN
MREDRKRGKDMVSDRERRDDKRRKCSRSKDYEDNSPHYRRLDKDRDRDRDRDRQREKERE
REKEKEREKEKEREKEKDRDRDRQREKESDSRRAAASAPLIIPLLSTSCSEEEVEEIDKE
EQQRRLEQEMIKRRERIERWRAERKRDTKAAVVAPSVVNSAKKWSLEDESEEDDSNPAPP
LESGKKDAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTFSKSFGKLGIGLATKAEADI
KKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVATGEKTKKEPEQPHVHAKADPEVCDKPQ
PEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKKKTTTLKKGEVIE
QNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMT
AGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAI
MSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIR
KFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV
VLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGR
SVVCKDVEQNVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPC
MSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHR
CGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQTLWMEYKALQEAEGKT
VHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKR
TVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAASAPATG
GAPSVAMGGALSSDKLELAKRLASKINSSKNLDTKGSVVTVEPMIKGPHATGAAATLLTA
RTVAEQMAAKLNNKLNYQPKEDEEGLSPLVGGTPNPFTKYEEELEINDFPQQARWKVTSK
EALAQISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITRLIKEE
LLKLSSAHHVFNKGRYKVV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttccgggcgtgatcgagacagggagcgcgaccgggaaagggagagggag
cgcgaccgtgagagagagcgcgacagggatcgtgagcgggacaaccggcacgacagtcgc
agtcgcgactatgacatgggcaagtccaggaacggaggaggcggtggcggctcccggaac
atgcgcgaggaccggaagcgaggcaaggacatggtcagcgatcgtgaaagacgcgacgat
aagcggaggaagtgttccaggtcaaaggattacgaggacaattcgccccattacaggcgc
ctggacaaggatcgtgaccgtgatcgggatcgcgatcggcagcgtgaaaaggaacgggag
cgcgagaaggaaaaggagcgcgaaaaggaaaaagagcgcgagaaggaaaaggatcgggac
cgagatcgccagcgagaaaaggaatcggatagcaggcgagcggccgcatcagctccgctc
atcataccattgctctcgaccagctgctccgaagaggaggtggaggagatcgacaaggag
gagcagcagcgtcgtctggagcaagagatgattaagcggcgcgagcgaatcgaacgttgg
cgcgcggaacgcaagcgggacaccaaggcggctgttgtggcgccatcagtggtcaattca
gcaaagaaatggagtctggaggacgagtccgaggaggacgacagcaatcccgctccgccg
ctggagagtgggaaaaaggacgccgaacccgactcgccgccctcaaaattccacagcata
cgcaagcgcttcgacgatgacgtggtcgagtcgaagttctcgcccgttaagcgccccacc
tttagcaaatcatttggcaaattgggcattggcctggccaccaaagccgaggcggatatc
aagaaggagccaccgccggtggacaccaaaaaggagatcaaaaagaagcccgaaccagta
gcggccaaaatggagatcgttgaggagcccaccgtcgcaacaggggagaagaccaagaag
gagccggaacagccgcatgtgcatgctaaagcggatccggaagtgtgtgacaagccgcaa
cccgaagccgagccagaagacgaaattgatccactggatgcctacatgcaggaggtcaac
aacgagatgcggcgtgtgaacaatttcgtcaatccacccgccaaatcgcagggtgtcgtc
attctcacgggagtggccaaaaagaagacgacgacgttgaagaagggcgaggtgatagaa
caaaacatggacagcttggagtactccagcgaggacgaactggaggacatacgtgacacg
gccgttaatctggcgatgaagcaccgcaaggagctggccaagattgatcattcctcggtt
acgtatgcgcccttccgcaagaacttctatgtcgaggtgccggaactgactcgcatgacg
gccggcgatgtggagaagtaccgctccgaccttgagggcatccaggtgaagggcaagggc
tgtccaaagcccatcaagacttgggcacagtgcggcgtcagcaagaaagagatggaagtg
ttgcgacggctgggcttcgagaagcccacgcccatccagtgccaggccataccggccatc
atgtccggacgggatctgataggtattgctaaaactggcagtggcaagacgttggcattc
attttaccaatgtttaggcatattctggaccagccgagcatggaggatggcgacggtgct
atcgctatcataatggcgcccactcgcgaactctgcatgcagatcggcaaggacatccgc
aagtttagcaagtcgcttggcctgcggccagtttgtgtttacggcggcacggggatctcc
gagcaaattgccgagctgaagcgtggcgccgagataattgtatgcacgccgggtcgcatg
atcgacatgctggcggcgaattctggacgtgtgacgaacctgcgtcgcgtcacctatgtc
gtcttggacgaggcagatcgcatgttcgacatgggcttcgagccgcaggtgatgcgcatt
atcgataacgtgcgaccggatcgccagacggtcatgtttagcgcaacgtttccacggcaa
atggaggcgttggccagacgcatacttaagaaacccatcgaggtgatcgtcggcggtcgg
tcggtggtgtgcaaagatgtcgaacagaacgtagtcattctcaacgacgatgcgaagttc
tttaagctgttggagctgctgggcatctaccaggaggcgggcagcatcattgtgtttgtc
gacaagcaggagaacgccgacatcctgctgcgcgacctcatgaaggcatcgtatccgtgc
atgagcctgcacggcggcatcgatcagttcgatcgcgactccaccatcatcgacttcaag
tcgggcaaggtgcgcctactgattgccacctcggtggcggcacgcggtttggatgttaag
gatctcatactggtggtcaactacgatgtgcccaaccactacgaggactatgttcacaga
tgtggtcgcaccggtcgagcgggcaaaaagggcagtgcctacacgtttatcacaccggaa
caatcgcgctatgcaggcgacattatccgcgccatggacctatcaggcacactgattccc
gccgagctgcagacactgtggatggagtacaaggcgctgcaggaggccgagggcaagacg
gtgcacacgggcggcggctttagcggcaagggcttcaagttcgacgagcaggagttcaat
gccgccaaggagagtaagaagttgcagaaggcggccttgggactggccgattccgatgat
gaggaggacattgagcaggatattgaccagcagattgagcaaatctttgcggcaaagcgc
acggttaaggatacttcggccgcggccacagctgcggcggcggcagctgctgcagcggca
gccgcagctgcggcagtttctggagctaatccggcactggcctcggcggcggctcaagcg
gcggcagctgcggctgctgccaatattgccattgctgcggcctcggcgcccgcaaccggt
ggagctccaagtgtggccatgggcggtgctctaagctccgacaaactggaactggccaaa
cgactggcatccaagatcaacagcagcaagaatctggacaccaagggtagcgtggtcact
gtggagcccatgatcaagggaccgcatgccacgggagccgccgcgaccctgctgaccgct
cgcacggtggccgagcagatggccgccaagttaaacaacaagctgaactatcagcccaag
gaggatgaggaaggactaagcccgctggtgggtggtacacccaacccgtttaccaaatac
gaggaggaactggagatcaacgatttcccgcagcaggcgcgctggaaggtcacgtccaag
gaggcacttgctcagatctccgagtactcggaggcaggtctcaccgtacgtggcacatat
gtgccgcagggcaagaatccgccggatggcgagcgcaagctctacctggccatcgagagc
tgcagcgaacttgccgtgcaaaaggccaagcgtgagatcacgcggctcatcaaggaggag
ctgcttaagctcagctccgctcatcacgtctttaacaagggtcgctacaaggtggtctag
DBGET
integrated database retrieval system
