Dinoroseobacter shibae: Dshi_0085
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Entry
Dshi_0085 CDS
T00612
Symbol
ipmi1
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00290
Valine, leucine and isoleucine biosynthesis
dsh00660
C5-Branched dibasic acid metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01210
2-Oxocarboxylic acid metabolism
dsh01230
Biosynthesis of amino acids
Module
dsh_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Dshi_0085 (ipmi1)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Dshi_0085 (ipmi1)
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Dshi_0085 (ipmi1)
4.2.1.35 (R)-2-methylmalate dehydratase
Dshi_0085 (ipmi1)
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GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
ABV91834
RoseoBase:
Dshi_0085
UniProt:
A8LKJ1
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All DBs
Position
complement(83697..85100)
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AA seq
467 aa
AA seq
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MTARTLYDKIWDAHLAHEAEDGTCLLYIDRHLVHEVTSPQAFEGLRMAGRTVRAPDKTIA
VPDHNVPTTLGRENPDQMTEDSRIQVEALDKNAKDFGIHYYPVSDIRQGIVHIVGPEQGW
TLPGMTVVCGDSHTATHGAFGALAHGIGTSEVEHVLATQTLIQKKSKNMKVEITGKLRPG
VTAKDITLSVIGATGTAGGTGYVIEYCGEAIRDLSMEGRMTVCNMAIEGGARAGLIAPDE
KTYEYVQGRPHAPKGAQWEAALAWWKTLYSDDDAHWDKVVTIKGEDIAPVVTWGTSPEDV
LPISAMVPAPEDFTGGKVDAARRSLDYMGLTPGTPLSEIEIDTVFIGSCTNGRIEDLRAA
AEILKGKKIAVKRAMVVPGSGLVRAQAEEEGLADIFKQAGFEWRMAGCSMCLAMNPDQLS
EGERCASTSNRNFEGRQGYKGRTHLVSPAMAAAAAVTGKLTDVRDLM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccgcacgctttacgacaagatctgggatgcgcacctggcccatgaggccgag
gatggcacctgcctgctctatatcgaccgccatctggtccacgaggtaaccagcccgcaa
gccttcgaaggtctgcgcatggcgggccgcaccgtccgcgcgccggacaagaccatcgcc
gtgccggaccacaacgtgcccacgacgcttggccgcgagaaccccgaccagatgaccgag
gacagccgcattcaggtcgaagccctcgacaagaacgccaaggatttcgggatccattac
tacccggtttccgacatccgccagggcatcgtccatatcgtggggcccgagcaaggttgg
accctgccgggcatgaccgtggtctgcggtgacagccacaccgccacccacggcgcgttc
ggcgcgctggcgcacggtatcggcacgtcggaggtcgagcatgtgctggccacccagacc
ctgatccagaagaaatccaagaacatgaaggtggagatcacgggcaagctgcgccccggc
gtgaccgccaaggatatcaccctctcggtgatcggcgccacgggcaccgcgggcggcacc
ggctacgtgatcgagtattgcggcgaggccattcgcgacctgtccatggaaggccgcatg
accgtctgcaacatggcaatcgaagggggtgcacgtgcgggcctgatcgcgccggacgag
aagacctatgaatacgtgcagggccgcccccatgcgccgaagggcgcacagtgggaggcc
gcgctggcctggtggaagaccctctattccgacgacgacgcccattgggacaaggtcgtc
accatcaagggcgaggatatcgcccccgtggtcacctggggcacctcccccgaagacgtg
ctaccgatcagtgccatggtgcccgcgccggaggatttcaccggcggcaaggtcgacgcg
gcccggcgctcgctcgactacatgggcctgaccccgggcacgccgctgagcgagatcgag
atcgacacggtcttcatcggctcctgcaccaatggccggatcgaagacctgcgcgccgcc
gcggaaatcctgaagggcaagaagatcgccgtgaagcgggcgatggtggtgccaggctcc
ggtcttgtccgcgcccaggccgaggaagaaggccttgccgacatcttcaagcaggccggg
ttcgaatggcgcatggcgggctgttccatgtgcctggccatgaaccccgaccagctgagc
gaaggcgagcgctgtgcctctacctcgaaccgcaatttcgaggggcggcagggctacaag
gggcggacgcatctcgtctcgcccgccatggccgccgccgccgcggtcaccggcaagctc
acggacgtgcgggacctgatgtaa
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