Dinoroseobacter shibae: Dshi_3064
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Entry
Dshi_3064 CDS
T00612
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dshi_3064 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_3064 (tag)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Dshi_3064 (tag)
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dshi_3064 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
ABV94797
RoseoBase:
Dshi_3064
UniProt:
A8LL48
LinkDB
All DBs
Position
complement(3232657..3233226)
Genome browser
AA seq
189 aa
AA seq
DB search
MAERCGWCGQDPLYVAYHDTEWGVPDRDPRALWEKLVLDGFQAGLSWITILRKREAFRAA
FAGFDPEVIAGWGPTEVERLLQDPGIVRHRGKIEATITNAQAYLGIEAAQGFSPYLWGFV
GDAPLQNRWQSLAEVPAQTDISRALSRDLKARGFKFCGPTIVYAFMQATGMVNDHLVTCP
SHARVARLA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgttgtggatggtgcgggcaggacccgctctatgtggcctatcacgacacc
gaatggggcgtgcccgaccgcgacccccgggccctgtgggagaaactggtgctcgacggg
ttccaggcgggcctgagctggatcacgatcctgcgcaagcgcgaggcgttccgcgccgcc
ttcgccgggttcgaccccgaggtgatcgcgggctggggcccgacggaggtggagcgcctg
ctgcaagaccccggcatcgtccgccaccggggcaagatcgaggcgacgatcaccaatgcc
caagcctatctcgggatcgaagccgcgcagggcttctcgccctacctgtggggcttcgtc
ggcgacgcgccgctgcagaaccgctggcaaagccttgcggaggtgcccgcccagaccgat
atctcccgcgcgctgtcgcgcgacctgaaggcgcgcggcttcaagttctgcgggccgacc
atcgtctatgccttcatgcaggcgacgggcatggtcaacgaccacctggtcacctgcccc
tcccacgcccgcgtggcgcgcctcgcctag
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