Drosophila simulans: Dsimw501_GD20571
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Entry
Dsimw501_GD20571 CDS
T01065
Symbol
Dsim_GD20571
Name
(GenBank) uncharacterized protein
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
dsi
Drosophila simulans
Pathway
dsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dsimw501_GD20571 (Dsim_GD20571)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsi03400
]
Dsimw501_GD20571 (Dsim_GD20571)
Enzymes [BR:
dsi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Dsimw501_GD20571 (Dsim_GD20571)
DNA repair and recombination proteins [BR:
dsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
Dsimw501_GD20571 (Dsim_GD20571)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
KMZ03998
FlyBase:
FBgn0192039
LinkDB
All DBs
Position
3R
Genome browser
AA seq
803 aa
AA seq
DB search
MLLSRLTWQARFVTRLLCNKMASKGWHNEDNKLDTFRRICDEIAGESSYLKKAEKLQRFF
EKGSSGKGFKGDTLLWVQFLIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGD
VSETLRKHFAASKKLKPQAQSKLYLQEVEEMLLKLVERTKEDEQTDLLQKLCSKATDLDL
RTFIRLVKHDLRINARARHILDAFGPDAYPTYQSSRDLVAIVGQFAGKENKKDASSAVKK
VKKTNSSGIQVMTPISPMLASPCKSVEEAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRDLKKYIPLAFPGGGKMILDSEIILVDTDTGALLPFGSLGAHKKQTFA
NAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIKPIKSHVQLSESEFLKTTRELATMT
ARVLHANLEGVVLKSPDSTYQPGKRNWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGG
TLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHESLIKLTERADANAIPSWLLCSKS
LVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLDSCSKDEKVIDNKTTPEKEKKLNGNQKKLKRSNTTGSDDEDGAP
VPSKRKESKALRSLSPSQKGLKDFFKPSKELKSVVKKEPKEEESVTQSTNSEGKLFEGLV
AHFAMEKDSSKLMQQFSQHGGCCTTETRKADLVFYTSTNEPLDLEKLRTLYRRSCQHLNV
TWLQISLDTQSRQPYPLYAVMMK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctattgtccaggctaacgtggcaggccaggtttgtaactcgtcttctgtgtaataag
atggccagcaagggatggcacaatgaggacaacaagttggacaccttccgtcgcatctgt
gatgaaattgccggcgagtcaagttacctgaagaaggcggagaaactgcagcgattcttc
gaaaaggggagcagtggcaagggcttcaagggcgacaccctgctctgggtgcagttcctc
attccggcggccaaccagcgcgtctacaatctgcagaacaaggcgctaatcaaactcttt
tcgcgcatttttaacgcagaccaacagcaaatgcatctggatctagagcaggatggagac
gtttcggaaactctacgcaagcactttgctgcttctaagaaactcaagccacaagcgcaa
agcaaactctatctgcaggaggtggaggagatgctcctgaagctggtggagcgtaccaaa
gaggatgagcaaacagatctgctacagaagttgtgctcgaaggccactgacctggatctg
cgcacatttattcgcttggtgaagcacgacttaagaatcaatgcccgggcccggcacatc
ctggatgcctttggtcctgatgcctaccccacatatcagtcttcccgcgatttggtggca
attgtcggacagtttgccggcaaagaaaataagaaggacgccagtagtgccgtcaagaag
gttaagaaaacgaactcgagtggaattcaggtaatgacgcccatatcgcccatgttggcc
agtccctgcaagtcggtggaggaggccttcaagaagagccccactggactgtatagcgag
atcaaatacgatggagagcgagttcaaatccacaagcagggcaacgacttcaagttcttt
agccgcaatctaaagcctgtggtggatcacaagatacgggatctgaaaaaatatattccg
ctagcctttcctggcggtggcaaaatgatactggactctgagatcattctggtcgacact
gatacgggagcactgctgccctttggttcgttgggtgcccataagaagcagactttcgcc
aatgctgcggtatgcttattcgtcttcgattgcatactgtacgatggcgaggatttgacc
cagctgccatttcgcaagcgtcgcgagatccttgagcagaatattaaacccattaaatcc
cacgtgcagctgtcggagtcggagttcctcaagaccacgagggaactggccacgatgacg
gctagggtgttacacgccaatctggagggtgtggtcctgaagagtccagacagcacatat
cagcccggcaaaaggaactggcttaaggtcaagaaggattacctattcgacggaaaaatg
gctgacaccgcggacttggttgttttgggcgcttggtacggatcagggaagaaaggtggc
acgcttagtattttcctcatgggctgttacgatgcgtttgggcgtttgtggaagacagtg
accaaagtgcactctggattggatgatgctaccaacgcagaggtacatgaatcactgatc
aaactaaccgaacgtgctgatgccaatgcaattcccagttggctgttgtgcagtaagtcc
cttgtaccagatgtactggccaaggatccgatgaaaatgccagtatgggagattactggc
gcagagttcaccaagtccgatgcgcataccgcgtctggaatctcaatacgatttcccagg
attactcgtcgtcgcagtgataagtcagccaaagaggccaatgatctggcccacttagaa
gatcttttcgaggcctcaaaatcgaatgtaaatgttgatttacttctggacagttgtagt
aaggatgagaaagtaattgataacaaaacaactcctgaaaaagagaaaaaactcaatggc
aatcaaaagaaactgaaaaggtccaatactactggttcagatgacgaagacggagctcct
gtgcccagcaaacgcaaggagtccaaagcgcttcgaagcttgtcgccttcgcaaaagggc
ttaaaggatttttttaagcccagcaaggagcttaaatcagttgtgaaaaaggaaccaaag
gaggaggaaagcgttacacaatccactaactcggaaggcaagttgttcgaaggattggtg
gcgcactttgccatggagaaggattcaagcaaactgatgcagcagttttcacagcatgga
ggatgctgtacaacggagacacgaaaagctgatctggtcttttatacaagtacgaacgag
ccattggaccttgagaagcttagaacgctgtatcgtcgtagctgccagcacttgaatgta
acgtggctccaaatctctctcgatactcagagtcgtcagccctatcccctatacgccgtg
atgatgaaatga
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integrated database retrieval system