Dactylococcopsis salina: Dacsa_0965
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Entry
Dacsa_0965 CDS
T02378
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsl03009
]
Dacsa_0965
Enzymes [BR:
dsl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Dacsa_0965
Ribosome biogenesis [BR:
dsl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dacsa_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Hydrolase_6
Herpes_ORF11
Motif
Other DBs
NCBI-ProteinID:
AFZ49693
UniProt:
K9YUD7
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All DBs
Position
965503..966246
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AA seq
247 aa
AA seq
DB search
MERVQKILSQWGVTSRRQAEKMMIAGRVKINGKVAQLGQKINLEQDQITVDGRLISPKKR
PRQLYILVNKPLGVVSTCRDTQNRKTVLDLLPNSLKNGQGLHPVGRLDINSTGALLLTND
GDLTLHLTHPRYHLPKTYEVWIKDNPPESVLEQWRNGVILDQKKTLPAAIKVLKRQREKT
LLEIVLTEGRNRQIRRVAEQLGYPVLALHRSAIGALNLKTKDKLLNESGNYRFLTAQEVY
YLKQESK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggaacgagtgcaaaaaattctctcccagtggggagtcacttcacgtcgtcaagctgaa
aaaatgatgattgctggacgagtaaaaataaatgggaaagtagcgcaactcgggcaaaaa
ataaatttagagcaggatcaaatcactgtagatggtaggttaatctcacctaaaaagcgt
ccacgccaactctatattttagtgaataaaccgctcggtgttgtctctacttgtcgggat
acccaaaaccgaaaaacagttctagacttacttcctaactccctgaaaaacggacaagga
ttgcatcctgtgggacgattagatattaattccactggcgctttactactaaccaatgat
ggagatttaacccttcatctcactcatcctcgttaccatttacccaagacttatgaagtt
tggatcaaggacaatcctccagaatctgtgttagaacaatggcgtaatggcgtaatccta
gatcagaaaaaaactttaccggctgcgattaaagttctcaaacgccaacgagaaaaaaca
ctcttggaaatcgtgcttacagaaggaagaaatcgtcaaattagacgagttgcagaacag
ttgggttatcccgttctggctcttcatcgtagcgcgatcggtgcgctcaatttgaaaact
aaggataaacttttaaatgaatctgggaattatcgatttttaacggcccaagaagtctat
tatcttaaacaggaatctaagtaa
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