Dactylococcopsis salina: Dacsa_2300
Help
Entry
Dacsa_2300 CDS
T02378
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsl03021
]
Dacsa_2300
Transcription machinery [BR:
dsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dacsa_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFZ50914
UniProt:
K9YVJ3
LinkDB
All DBs
Position
complement(2336135..2337121)
Genome browser
AA seq
328 aa
AA seq
DB search
MPTAKLDKNNDKPIFSADMVRTYLHEIGRVPLLTHEQEIILGKQVQKMMGLIEQKEELEK
ELEREVTEEEWVEKTELTSAELQKAIKDGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKI
KKVQRELAQKLGRNATPTEIAKELELEPSQIREYLSIARQPISLDVRVGDNQDTELSELL
EDDENSPETYLTQESMRQDIDSMLSELTPQQREVLSLRFGLEDGNELSLAKVGKKLNLSR
ERVRQLEHQALAKLRRRRGGVQEYIAAG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgcaaaactagataaaaataacgataagccaatcttctctgccgacatggtg
cgaacctatctccatgagatcggtcgtgtccctctgctaacccacgaacaagagatcatc
ttgggtaagcaagtgcagaagatgatggggctgatagaacagaaagaagaattagaaaaa
gaactggaacgagaggtaactgaggaagaatgggtggaaaaaaccgaacttacctcagcc
gagttgcaaaaggcgatcaaagatggtaatcgtgccaaacggaagatgattgaagccaac
ttgcgtttagtggttgccattgccaagaagtaccagaagcgaaatatggaattcttggac
ttgattcaagaaggaacattagggctggaacggggtgtagaaaagtttgaccccactcgc
ggttataagttctctacttacgcttactggtggattcgccaggcaattactcgcgcgatc
gcccaacaggctcgtgccattcgcttaccgatccatattaccgaaaaactgaacaaaatt
aaaaaagtacaacgggaactggcgcaaaaactgggacggaatgcaaccccaacggaaatc
gctaaggaattggagttagaaccttcgcaaattcgggaatatctgagcattgctcgtcaa
ccgatttccttagatgtgcgtgtgggagataatcaagatacggagttatctgagttactc
gaagatgatgaaaactctcctgaaacttatctcactcaagagtcaatgcgtcaagacatt
gattctatgctttcggaattgactccccaacagcgagaggtgctttccctacgctttggt
ttagaagatggtaatgagctttctttagccaaggtggggaaaaagctcaacttaagtcgg
gagcgagttcgtcaactggaacaccaagcattggcaaaactccgcagacgacgcggcggc
gtacaggaatacatcgcagccggttaa
DBGET
integrated database retrieval system
