Diprion similis: 124405466
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Entry
124405466 CDS
T08947
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
dsm
Diprion similis
Pathway
dsm03013
Nucleocytoplasmic transport
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405466
09122 Translation
03013 Nucleocytoplasmic transport
124405466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124405466
03041 Spliceosome [BR:
dsm03041
]
124405466
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124405466
Spliceosome [BR:
dsm03041
]
Complex C
Other components
EJC/TREX
124405466
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124405466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
RraB
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
124405466
NCBI-ProteinID:
XP_046736320
LinkDB
All DBs
Position
4:11122580..11127466
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AA seq
652 aa
AA seq
DB search
MMASFETLRHDYNNHLEKCFKLSDLSGFQKKCLEMNTNVSNRKSIVDQALRDTLLTVLLD
DSSGNVQHLESYITFCIELCRKDLTTASMPVILLGDIFDCMTLDRCEKLFTFVENNVVVW
KEEIFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNL
ENHTEFGNEKSEKEVLEQIVEDGDKTENKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWK
VFSAHTSHVLSAFTSFKLEEQRSCPTKCTKMDTSSEENYKETHYFAKYLTNQKLLELQLS
DSNFRRYVLLQFLILFQYLNSAVKFKAETHELKPDQVEWVKTTTDQVYLLLSETPPNGSG
FAETVKNILKREEHWNAWKNHGCPPFKRPALESNSEGEEPRKQKRRIGDVIRAAEDEKKY
HLGNPELTKLWNLCPNNLEACKSMDRDFLPSLETYFAEAIEQLDPAAMVEDEYKKVNDGN
FGWRALRLLARRSPHFFVHGNNPINKLPEYLEAMIKKIAKDRPQTQSDIKTESEEIPTDG
NEAEFNEDVLKQETEQVEVEASATKFSKFNKVTADIVAKLSDILKGNWKDLAAKFGYHAD
EIAFFQKKRTQYEQCKSMLEIWAEEDEDASIENLAYILEGLGFTEAVAVLKS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctttcgagacactaaggcacgattacaacaaccacctcgaaaaatgcttc
aagttgtcagacttatccggattccaaaaaaaatgtctggaaatgaacacaaatgtctcg
aatagaaagtcgatcgttgatcaagcgctgcgagacacgctacttactgtattgctggat
gattcttccggaaatgtacaacatcttgaatcttacataacattttgtatcgagttatgt
aggaaagatttaacaacagccagcatgccggtcatattgctcggtgatatatttgactgc
atgacgttggaccgatgtgagaagttattcacatttgttgagaacaacgttgttgtgtgg
aaagaagagatatttttcagtgcctgcaaaaataatttacttagaatgtgcaacgatctg
cttagaagactttctcgctctcaacaaactgtattttgtggaaggattcttctatttctt
gccaaatttttcccattctctgagaggtcagggttgaatatagttagtgaattcaatctc
gaaaatcacaccgaattcggcaatgagaaatcagagaaagaagtgcttgagcagatcgtg
gaagatggcgacaaaacggagaacaaaattccaatcgattacaatctgtaccgaaaattc
tgggcactgcaagactttttcagaaatcctaatcagtgctacaataaaatgcattggaag
gttttctctgctcatacgtcgcatgtcttgtcggcgttcacttctttcaaattagaagag
cagcgtagctgtcccacaaaatgtacaaagatggacacttcctcggaggaaaactacaag
gaaactcactacttcgcaaagtacctgactaatcaaaagctgttggagttgcagttgtca
gattcaaactttcggagatacgtattactccagttcctgatactctttcagtacctcaac
agcgccgtaaaattcaaagccgaaacacacgagctgaaacctgatcaagtcgaatgggtc
aagacaacaacagaccaagtgtatttgttattgtctgaaacgcctccaaacggatctggc
tttgcggaaactgtaaaaaacattttaaaacgagaagaacactggaatgcgtggaagaat
catggatgtccaccgtttaagaggcctgctcttgagtctaattctgagggagaagaaccg
aggaaacaaaaaagacggatcggcgatgtaatccgagctgccgaagatgaaaaaaagtat
catttaggaaatcctgagttgacaaagttatggaatttgtgccctaacaatttggaggct
tgtaaatcaatggatagagacttcctgccttccttggagacttattttgcagaagctatc
gagcaattagatccagcagcgatggtcgaagatgaatataagaaagtcaatgatggcaac
tttggttggagagcgctgcggctacttgctaggcggagtccccatttttttgtacacggg
aataaccccattaacaaattacctgagtatttggaagctatgataaaaaaaatcgccaaa
gatcgaccgcaaacgcagtcggatataaaaacagaatccgaagaaattccgacagacgga
aacgaagccgaattcaacgaggacgtacttaaacaagagaccgaacaagttgaggttgag
gcatcagcaaccaagttcagtaaattcaataaagtgacagccgatattgttgcgaaactg
tcagatatattaaaagggaactggaaagatctggcagcgaaattcggatatcatgccgac
gaaatcgcattctttcagaagaaacgaacacagtacgaacagtgtaaaagcatgctagaa
atctgggccgaagaagacgaggacgcatcaatcgaaaatttggcttacattctcgaagga
ctgggctttacagaggcagttgccgtattgaagagctaa
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