Diprion similis: 124408859
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Entry
124408859 CDS
T08947
Name
(RefSeq) endoribonuclease Dcr-1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsm03036
]
124408859
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124408859
microRNA pathway
RISC loading complex
124408859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
124408859
NCBI-ProteinID:
XP_046742063
LinkDB
All DBs
Position
8:complement(13247733..13258556)
Genome browser
AA seq
1933 aa
AA seq
DB search
MAFSLNDQIYTKSFTPREYQVELLYAALESNIIVCLGKNSEQIFIVIKLIQELANSNRRS
PSEGGKRSVYILRDTERCLTKAVYIQQLTDLRVLICDSETWPEFDRKFAESQVIVATSRV
CADLLIENKIYPSQINLAIVDQCHKAVNDEKLKFVLQKFNVSDGPRLIGFAAPVFNLTCE
PGRLEAEVELLEKTFHCRIETASDILSVLRYSPKPKEYIVEYKCGEYEELNQTLESCAMH
AMNFLCDHRYDPTEIYNDEFLEDIQKIPDPKQEPCSMIEDFLYILRTLGAWCANHAALAL
LIQAEKLKVKTPYERHYLLFNVVVSLFIKIRAICESEFENLNEREKLYKFSTPCVHRLLH
ILKCYAPSNKKELTIPDNKLSNGHSVSTCKKEIDTGKDVLQQSKYIGNVRKLRTGIKRTP
KSLRYPRSQIDPDLLCGVIFVDKGFTAKILFYLLCDACKYDKDLQFLSPLYTIEKNPEGT
SSAHDMEVQHRKQEEVLKSFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKSYQSYVQ
CKSRARAVDALHILFVSEKMSNEYIQQLAEYHYIEKTLLLKCANKEPSEEEEFLADKYGD
LLPQYKPLSIEGSPSVSFNSAISLVNRYCAKLPSDTFTRLTPEWMIEPTIVDNKTMYVCS
IRLPINSPVKYTLTSYPMPNRAMARRLAALQLCIDLHRANEIDDYLLPIGKENFKANPED
AEVPALPDETKAEFSEARPGTTKRRQYYYKKTAEVLTDCRPVPMTKSFLYHISMVLTCPL
PEEQNTRGRRIYPPEESAIGFGILTLKKIPKLCPFPIYTRSGEVHVKLELSKETVTLNAG
QIERVAAFLNYTFTNVLRLQKYLMLFDPNASEHSYFIVPVKTVTTENGPDVNVHWEFLEC
IYENRNTIPNEVSEEVRKQFKFDATKYHDAVIMPWYRNKDQPQYFYVAEICANLNPRSSF
PGADYSTFEEYYLKKYNIQIQNLNQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETK
KAKRENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAEMINL
GQQHLNPDFEWLPLDFGWSLAEVLKKSKDSSKLIEIKSDAKTTESVIPKLADSMPIAEKI
EKDISSEYDDSVDKDNEMEIGTWSNEMAINAVELNNENIFSPNLTVLQDTFSWNDIRYGS
PACDSDLDAYDTDDTSSEAMGDFSDESDEGSGGLRISFMGDNVAEAVEDENRIRKSEINK
RILDLLELERTYDEDVWQCPNDIENGLIQQHKTIQNIETNRTKEEILTNGMFIRSDQEII
LTRRSVAVQNKTELPPSEYHEYISQVSKRFTQEVINIKPLRQPIKKQSNNSQVLEEIDDS
LFSFDYQPNLNGHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYD
NIHEGKLSHLRSKQVSNLNLYRLGRQKVLGESMIATKFEPHDNWLPPCYYVPRELEQALI
ESGVPANLWNQADIPVLRAVNRNEICQLVRETEHKLEIMRTELDRSSNDSVTDFENLRCF
IPYNLITQHSIPDKSVADCVEALIGAYLIACGPRGAFLFMAWLGIHVLPFQKVSVISTNE
PLDRPPGSSSYVKEINENGETCWTQIRYGNLDEPQCPLLRHVPDPEKELSLMLDGYNDLE
ERMGYKFRDPSYLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPG
ALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVIDRFVRIQEENGHSISEEYYLI
GEDECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWRVYYRIMRSEIEQFSTNVPK
SPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALK
KLKKMQRHQREKL
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcattaaatgatcaaatttatactaagtctttcactcctagagaatatcaa
gtggagctcctctacgcagctttagagagcaacataattgtatgtctaggaaaaaattct
gaacagatatttattgttatcaaactaatacaagaattggcaaatagcaacagaagatct
ccgtcagaaggaggcaagcgttcagtatacattctaagagatacagaacgatgtttaacc
aaagctgtatatatacaacaattaacagatttacgtgtgcttatctgtgattcagagaca
tggccagagttcgatagaaaattcgctgaaagtcaggtgattgtcgccacgtcacgtgtt
tgtgcagatctgttaattgaaaataaaatttatccaagtcagataaatttggcaattgta
gatcaatgccacaaagcagtcaacgatgaaaagctaaagtttgttttgcaaaaatttaac
gtctctgatggccctcgactgattggttttgctgcaccagtttttaatctaacttgtgag
ccaggacgactagaagcagaagttgaactcttggaaaaaacctttcattgtagaattgaa
acagctagtgatattttatcagtattacgatatagtccaaaaccaaaagagtacattgta
gaatacaaatgtggcgaatatgaagaattaaaccagactctggagagctgtgctatgcac
gctatgaactttttatgtgatcatcgctatgatcccactgaaatttacaacgatgagttc
ctcgaggacatacagaagattcctgatcctaaacaggaaccttgctcaatgatagaagac
tttttgtacatacttcgaacacttggggcttggtgcgccaatcatgctgctctggctttg
ctaatccaggcagaaaagctgaaagtaaaaaccccttatgagcgacactacttattattc
aacgttgtagtttccttgtttattaaaataagagctatatgtgaaagtgaatttgaaaat
ttgaacgaaagagaaaaattgtacaaattctccactccatgtgttcatcgactattacat
atacttaagtgttatgccccatctaacaaaaaggaattgactatcccggacaacaaactg
agtaatggacatagtgtatctacctgcaagaaagaaattgatactggaaaagatgtcctc
caacaatcaaaatacattggaaatgtcagaaaattgcgaactggcattaaaagaactcca
aaatcattacggtacccacgtagtcaaattgatccagatctgttgtgcggagttattttt
gtggataaaggatttacagcaaaaatattattctatctgctgtgtgatgcttgtaaatat
gacaaagatttacaatttctttctccactttatacaattgaaaagaatcctgagggaaca
agctctgctcatgacatggaggttcagcatcggaaacaagaggaggttttaaagagcttc
cggatacacgaatgtaatcttttgattgctacatcgatattggaggagggaatagatata
ccaaaatgtaattttgtgatgaggtatgatttccctaagagctatcagtcttacgtgcaa
tgcaaaagccgagctcgggcagttgatgcccttcatatacttttcgtgagtgaaaaaatg
tccaacgagtatatacaacagctagctgaatatcactatattgaaaagactttattatta
aaatgcgccaataaggaaccatcggaagaagaagaattcttggcggataaatatggtgat
ttgttacctcagtacaaaccattaagcattgagggctcacctagtgtttcttttaattct
gcaatatctttggttaacaggtattgtgccaagctgcctagcgatacgttcactcgatta
acaccggaatggatgattgaaccaacaattgttgacaataaaaccatgtatgtttgttcc
atacgtttgccaataaactcgcctgtgaaatatacactaacgtcatatccaatgccgaat
agagcaatggctcgtcgcttggctgcacttcaactctgtatagatcttcatagagctaat
gaaattgatgattatttgttacctattggaaaagaaaattttaaagcaaacccagaagat
gctgaagtacctgcactaccagatgaaacaaaagctgagttttccgaagcgcgtccaggt
accactaaacgaagacaatactactataaaaagactgccgaagtgttaacagattgcagg
cctgttccgatgacgaaatcgtttttatatcatattagtatggtactcacttgccctttg
cctgaggaacaaaatacaagaggtcgtcgaatatatcctcctgaagagtcagctatagga
tttggtatcttaactctaaaaaaaataccaaagctatgcccattcccaatatacacaaga
tcgggagaggttcatgtgaaacttgaattaagtaaggagacagttacattgaatgctggt
caaattgaacgcgtagcagccttcctcaactacacgttcacaaatgttctaaggctccaa
aaatacctgatgctatttgatccgaatgcttccgagcattcatactttattgttcctgta
aaaacggttaccacagaaaatggcccggatgttaatgtgcattgggagttcttagaatgt
atatatgagaacaggaatacaataccgaatgaagtgtctgaagaagttcgcaaacaattc
aaatttgatgcaactaaataccatgatgctgttattatgccatggtatagaaataaggat
cagccacaatatttttatgtagcggaaatttgtgccaacttgaacccaagatcttctttt
cctggggctgactacagtacatttgaggagtattatttgaagaaatataatatacagatt
cagaatcttaatcagccgttacttgatgtagatcatacgtcagctcggctcaatttcctc
acaccaagatatgttaatcgtaaaggtgttgcattacccactagtagtgaggaaaccaag
aaggcaaaaagagaaaatttggaacaaaaacaaatattggtagcagagctttgtgctatt
cacccatttcctgcctcattatggagacaagcagtttgtctgccatgcatactttataga
atcaacgcacttcttcttgctaatcaaatacgatgccaggtagcagaaatgataaatttg
gggcagcaacatttaaatccagactttgaatggttgccattagactttggttggagtttg
gcggaagttttgaagaaatcaaaggacagtagtaaattgattgaaattaaaagtgatgct
aaaactacagaatctgttatacctaaattggcagatagtatgcccatagcagaaaaaatt
gagaaagatatttcttcagaatatgacgattccgtggataaagataatgaaatggaaatt
ggaacgtggtccaatgaaatggccataaatgcagtggaattgaataatgaaaatattttt
tcaccaaatttaacggtgctacaagataccttttcttggaatgatattaggtatggctcc
cctgcctgtgattctgacttagatgcttacgacactgatgacacctctagtgaagcaatg
ggagatttttcagacgaaagtgatgaaggcagtggtggtctacgcatttctttcatggga
gataatgttgcagaagcagtggaagatgaaaacagaatacgtaaaagtgaaattaataaa
agaattttagatttattagagttggaaagaacttacgatgaagatgtttggcagtgtccc
aatgatattgagaatggattaattcaacaacataagacaattcaaaatattgaaactaat
cgaaccaaagaagaaattctgacgaatgggatgtttattcgtagcgatcaagaaatcatt
ttgacgaggcgctcggtagctgtgcaaaataaaactgagttaccgccatctgagtatcat
gaatacatctctcaggtttcgaaaagatttacacaggaagttattaatattaagcctctg
aggcaacccattaagaaacaatcaaacaactctcaggtattagaagagatagatgattct
ctttttagttttgattatcaaccgaatttaaatggacaccctggaccaagtccaagttta
attcttcaagcgttgacaatgtcaaatgctaatgatggtattaatctagagaggctcgaa
actattggagattcttttctaaaatatgccataactacatacttgtattgtacatatgac
aatatacatgaaggaaaattgagtcacctgagatcaaaacaagtgagcaatttaaattta
tatagattaggccgtcaaaaagtattgggtgaaagtatgatagcaactaaatttgaacca
cacgataactggttaccgccatgctattatgtaccacgtgaattagaacaagcattaata
gaatctggagtgccggcaaatttgtggaaccaagcagatattccagttctcagagctgta
aatcgaaatgaaatatgccaacttgtccgagaaacggagcataagctcgagattatgcga
actgaattggatagaagcagtaatgattccgtgactgattttgaaaatctacgatgtttc
ataccatataatctaattacacagcatagtatacctgataaaagtgtcgctgactgtgtg
gaagctttaataggagcatatttaatagcatgtgggcccagaggagcttttttatttatg
gcctggctaggaattcatgtcttaccattccaaaaagtttctgtcatatccaccaatgaa
cctctcgacagacctccaggtagttcatcctatgttaaggaaattaacgaaaatggagaa
acatgctggacacaaatacgctatggaaacttagatgagccacagtgcccacttttgagg
catgtaccagatcctgaaaaggagttgagtctgatgctggatggctataacgatcttgaa
gaaaggatgggttataagtttcgagatccgagttacttactgcaagcattcacccatgca
tcttatcagccaaataaattgacagattgttaccagcgtttagaatttcttggagacgca
gttttagattatctgataacaagacatttgtatgaggatacaaggcaacattcccctggt
gctctcacagatttgaggtcagctttggtaaataatacaatatttgcttcgctggcagtg
agatgtgggtttcataaatattttcgccatctatcaccaggtttaagtgtagtcattgac
agatttgtgagaatacaagaagaaaatggtcactctatcagtgaagaatattatttaatt
ggagaagatgaatgcgaagaagcagaagacgttgaagttccaaaggcattaggtgatgtt
tttgaatccttagcaggagcaatttatttagacagtggtatgtctcttgatgctgtttgg
agggtgtattatagaatcatgaggtctgaaatagaacaattcagtacgaacgtaccgaaa
tctccaataagagaattattagagttagaacctgaaaccgcaaaatttgggaagcctgaa
aaactagctgatggtcggcgggtacgagtcacggtagatgtgtttggaaagggttctttc
aaaggaataggaaggaattatcgcattgctaaatgtacagcagcaaaatgtgcacttaaa
aaactgaaaaaaatgcaacgacatcaaagagaaaaactgtga
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integrated database retrieval system
