Diprion similis: 124410193
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Entry
124410193 CDS
T08947
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dsm
Diprion similis
Pathway
dsm03022
Basal transcription factors
dsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124410193
09124 Replication and repair
03420 Nucleotide excision repair
124410193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsm03021
]
124410193
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124410193
Transcription machinery [BR:
dsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124410193
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124410193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
124410193
NCBI-ProteinID:
XP_046744330
LinkDB
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Position
9:complement(6626366..6630887)
Genome browser
AA seq
402 aa
AA seq
DB search
MADEDDGKEYRWETGYEKTWEAIKEDDDGLLEGAVADIIQRAKRKRQSERHGGARLGMMR
HLYIVLDCSEAMSNQDLKPTRLLCSIKLLEDFIDEFFDQNPISQLGLIVTRNKRAEKLSE
LAGNPKKHIKELKGLHLTALTGEPSIQNSLELALKSLKLLPSHASREILVLMGSLTTCDP
GDINTTIETLKSEGVRCSVIGLAAELHICKRLATATGGDHGVVLDDKHYKEQLSIHVDPP
AAATRLDSALVKMGFPHHALHSTAETPMTMCMCHCESSEEDSKLVTTGYLCPQCLSKHCE
LPVECRACGLTLVSAPHLARSYHHLFPVENYREETYEGSPSICYGCRKVLTQLDKKVYMC
GKCQQGFCLDCEIFIHETLHTCPGCATNPDTFQISSEKVPIN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggatgacggaaaggaatatcggtgggaaactggatatgagaaaacatgg
gaggcgatcaaggaagacgacgatgggttgttggaaggagcggtggcagatattattcaa
agagcgaagaggaaacgtcagtcggaaagacatggcggtgcaaggctgggaatgatgaga
catctttacattgttttagactgttcggaagctatgtctaatcaggacttgaaaccaacg
agattactttgttccataaaacttttggaagatttcattgatgaattcttcgatcaaaat
cctataagtcaacttggtttgatcgtaacaaggaataaacgggctgagaaattgagcgag
cttgccggaaacccaaagaaacacatcaaggaattgaagggcttgcatcttacagctttg
acgggtgaaccgtcgattcaaaactcactagaactggcactaaaatccctaaaattgctg
ccgtcgcatgcaagtagggaaatccttgtgttgatgggttcgctaactacctgtgaccca
ggggacatcaatactacaatagaaactttaaaatctgaaggagtgcgctgtagtgtgata
ggattggctgctgaattacatatctgtaaacgtttggctaccgcaactggtggcgatcac
ggagttgttttagacgacaagcattacaaggaacagttgagcattcatgtagatccacca
gcagctgctaccagattagactcggccctggtgaagatgggcttccctcatcatgcattg
cattcgactgcggaaacaccaatgacgatgtgcatgtgccactgtgaaagttcggaagaa
gatagcaagcttgtgacaactggatacttgtgtccacaatgtctgagtaaacattgcgaa
ttacccgtcgaatgtcgagcatgtggactgacccttgtgtcagctcctcatttggctcgt
tcttatcaccatttatttccggttgaaaactatagagaagaaacgtatgaaggatctcct
tctatatgttatgggtgtagaaaagtcctcactcaattagataagaaggtatacatgtgc
ggtaaatgtcagcaaggcttttgtttggactgtgaaatatttattcacgaaacgctccac
acttgtcctggatgtgcaacgaatcctgatacgtttcaaatatcttcagagaaagttcca
atcaattag
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