Diprion similis: 124414491
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Entry
124414491 CDS
T08947
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dsm
Diprion similis
Pathway
dsm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124414491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124414491
Enzymes [BR:
dsm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
124414491
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
124414491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_IV
Terpene_synth_C
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
124414491
NCBI-ProteinID:
XP_046751398
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All DBs
Position
2:complement(21364246..21368606)
Genome browser
AA seq
903 aa
AA seq
DB search
MTLTLASKIKFRDFCTVLDRIFKAQAASKSSHLEFLIKKCRDLSEKLKEKDKDADISFFP
ILRLLLPLHDRERGAYGLKQTALAKLYVRVLGLGQTSKDAQELLHYKVPISGKQSGGDFA
AIAYSILRERVQCQESSMTVEQVNTILDSIAEKNASNISKDGEFQKLIQQLSAVEQKWLI
RILLKDLRFGLSQKKILSAYHSDAVELFDVSMSLRDVCDKLQNADIGIKCRIEIFSPFKP
MLLERCKIDDVGKFFTDQESYFVETKHDGERFQLHMKDGQFSYFSRNAFNFTEAYGKSKS
SGLLTGKIARLLNPSCRSIIMDGEMMGWHKVRQRFGSKGMSFDVKKMTPTSTHQPCFIAF
DVIMYNEKLLVDEPLTERLKVLKEAFVEEKGVLVRSQTRIVSSKAELLDAFNKSMDTCEE
GIVLKKCNSIYKPGVRVGSGCYKIKAEYSADLVEDIDLVIVGGYYGEGRFRGCINSFLVA
VTHSRDPETTNDLKFHAVSSVRTGIKIEALEELLSTLNPHWIKKCPDNVVGPRNEPPNLW
IEPKNSIVLKLRATELVRSSSYPAGYSLRFPRVVAIRRRDEKSWRECCTTEEFHSLVKDR
GVIQKLTKRHATEHDVLEDLPEKSPRKTKDRTIKVLNYTPCAKTDVARISRLLDDKEICV
VNGNNDISKESVEKIVREHGGSVVEHPGRKTFCAIVGTANKLRVKNMIQGQKYNVVNLEW
LLRATKPENFASLQPWLPWELLSATESTRSHMSTVFDDTYDSYVQDTNIESLKRSLERAA
ELAKDSQLTNEQYKEIDRELFGHETSPFSVFRGSVGYFCTSDKQRNLEFRFMGGTATGIL
DNRVTHIFALKNSDIPAEIHNSLAAGESVPKILDEQWIADCFRERKLLPDTEYSIHQNTT
NSC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttacattggcctcaaaaattaaattcagagatttttgtacggttctcgataga
atattcaaagcacaagctgcctcaaaatctagccacttggaatttttgatcaagaaatgt
cgcgatttgagtgagaaattgaaagagaaagataaagacgcggacatttcattttttcca
atactgagactactcctgccactgcacgatcgtgagcgtggagcttacggtctgaaacaa
acagctttggcaaagttatatgtacgagtcttaggacttggacagaccagcaaagatgct
caggaattactgcactacaaagttccgatatctggaaagcaaagcggtggagactttgca
gcgattgcatattcaattttgcgtgaacgtgttcaatgtcaagaaagttcaatgactgtt
gaacaagtaaatacgattctagacagtattgcggagaaaaacgccagcaacatcagtaaa
gatggagaatttcaaaaacttattcaacaattaagtgcggttgagcaaaagtggctgatc
cggattcttctcaaggatttgagatttggactttcgcagaaaaaaattctaagtgcctat
cactcagatgcggtggaactgttcgacgtatcaatgagcctccgtgatgtctgtgacaag
ttgcagaatgcagacattggaataaagtgtcgaatagaaattttctccccatttaagcca
atgctactggaaaggtgtaaaattgatgatgttggtaaattttttactgatcaagaatca
tatttcgtggagacaaagcatgacggggagagattccagctgcacatgaaagatggccag
tttagctatttttccaggaatgcatttaatttcacagaagcatatggcaaatctaaatct
tcaggtttgctgactggtaaaattgcgagattgttgaacccttcttgccgctctatcatt
atggatggtgaaatgatggggtggcacaaggttcgccagagatttggatccaaaggaatg
agtttcgacgtgaagaaaatgacaccaacgagcacacaccagccctgctttattgccttt
gacgtgatcatgtacaacgaaaagctccttgttgacgaacctttaacggaacgtttgaag
gtgctgaaggaagctttcgtcgaggagaaaggtgtcctagtccgaagccaaacgagaata
gttagcagcaaagctgaattactggacgcatttaacaaaagtatggatacttgtgaagag
ggaattgttctgaagaaatgtaacagcatttacaaaccaggggtccgtgtgggtagcggt
tgctataagataaaggcagagtattctgcggaccttgtagaagacatagatttagttatt
gtcggagggtattacggagaagggagattcaggggctgtatcaacagtttccttgttgct
gtgacgcattctcgagatcctgaaacaacgaatgatctcaaatttcacgcagtctcttcg
gtgcgaactggaatcaagatagaggcattggaagaattactgtcaacattgaatcctcat
tggattaagaaatgtcctgacaatgttgttggaccaaggaatgaaccacctaatttgtgg
attgagccaaaaaattctatagtcttgaagttacgcgccacagaattggtgcggtcaagc
tcttatccagctggatatagtttaagatttcctcgggttgtcgcaatcagaagacgagat
gagaagagttggcgcgaatgctgcacaacagaggaattccactcgcttgtaaaggatcgt
ggagtaattcaaaagctgacaaaacgtcatgcaaccgaacatgatgttctggaagatctt
ccagaaaaatctccaagaaagacgaaagacagaactattaaagttctaaactatactcct
tgtgcaaagaccgatgttgcacgtatcagtcgactgttagacgacaaggagatctgtgtc
gtgaatggaaacaacgacatctccaaggagagcgttgagaaaattgtgcgcgagcatggg
ggaagtgtagtagagcatcctggccgaaagactttttgcgctattgtaggaactgctaac
aagctcagagtaaaaaacatgatacagggtcaaaagtacaatgttgttaatttagagtgg
cttttgcgtgctacaaaaccagaaaactttgcaagcctccagccttggctcccgtgggaa
ctgctatctgccactgagtcaaccagaagccatatgtcaacagttttcgatgatacatat
gatagttatgtacaagatacgaatatagagagtttaaaacggtccttagaaagagctgca
gaattggcaaaagattcgcagttgaccaacgagcagtacaaggaaatcgacagagaactg
tttggtcatgaaacatcgccgttctcagtgttccgtggcagcgtgggatatttttgtacg
agcgataaacaacgaaatctggagtttcgcttcatgggtggaacagctactggtatactt
gacaatcgcgtgactcatatctttgctttgaagaacagcgatattcctgcagaaattcat
aacagtcttgcggctggagaatcggtgccaaagattctcgacgagcaatggatagcggac
tgctttcgtgaacgaaaattgctcccagataccgagtattcgatccaccaaaatacaacg
aacagctgttag
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