KEGG   Dickeya solani IPO 2222: A4U42_18100
Entry
A4U42_18100       CDS       T04410                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
dso  Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:dso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dso03400]
    A4U42_18100
DNA repair and recombination proteins [BR:dso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     A4U42_18100
SSDB
Motif
Pfam: ResIII DEAD Helicase_C SWI2_SNF2 AAA_30 zf-tcix zinc_ribbon_2 SLFN-g3_helicase AAA_22 zf-ribbon_3 DZR KorB AAA_16
Other DBs
NCBI-ProteinID: ANE77078
LinkDB
Position
complement(4212430..4214205)
AA seq 591 aa
MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE
LVEQNHAKYCALGLQADIFAAGLNQRDSDGKVVFGSVQSVARHPDKFDDAFSLLIVDECH
RISDDEDSQYQQIIQHLQRANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDSCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSNGLFSNGLFSDVELNRELKRQQ
RVTPQIVRQITEYAANRRGVMIFAATVEHAREVEGLLPTGEAALISGETPAPQRDALIAA
FKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFPGKTDCLILD
YAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCSFANLFWGKCTDDGTVIEHYGRRCQGWQ
ADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQTCEAVLVDPDDMLKAALKLKDALVLR
CSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRNAFTHVFLRAHQRAPGVPF
HWQHADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELRG
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgtcatttacactgcgcccataccagcaagaagcggttgacgccacccttgcctatttt
cgccagcacaccgctccggcggtgatcgttttacccaccggcgccggcaaaagcctggtg
atcgccgagctggcgcggctggcgcgcggccgggtattggtgctggcgcacgtcagggaa
ctggtggagcagaatcacgccaaatattgcgcgctggggctacaggcggacattttcgcc
gccgggcttaaccagcgcgacagcgacggcaaggtggtgtttggcagcgtgcagtcggtg
gcgcggcaccccgacaaatttgatgacgctttctcgttgctgatcgtcgatgaatgtcac
cggattagcgacgatgaagacagtcagtaccagcaaatcatccagcatttacagcgggcc
aatccccagttgcgactgctgggattgaccgccaccccttatcgcctcggccggggctgg
atctatcagtaccactatcacggcatgatccgcggcgacgatagctgcctgtttcgcgac
tgcatctacgagctgccgctgcgctacatgattcggcacggttttctggtgccgccggag
cggctggacatgccggtagtgcagtacgactttagccaactggcggcgcgcagcaatggg
ttgttcagcaatggactgttcagtgatgtggagctgaaccgcgagttgaagcgtcagcag
cgagtcacgccacaaattgtccgccagattaccgagtacgccgctaaccgacgcggcgtg
atgattttcgccgccacggtcgaacacgcgcgggaagtcgaagggctgctgccgaccggc
gaagcggcgttgatcagcggcgaaacgccggcaccgcagcgggatgcgctgatcgccgcc
ttcaagcagcaacagttgcgctatctggttaacgtgtcggtgctgaccaccggtttcgat
gcgccgcacgtcgatgtgatcgccattttgcgcccgacggaatccgtcagcctctaccag
caaatcatcggccgcggcctgcgcctgtttcccggcaaaaccgactgcctgattctcgac
tacgccggtaatccgtttgatctttacacgcccgaagtcggccacagcaaaccgcacagc
gacagccagccggtgcaggtgttctgcccgcagtgcagcttcgccaacctgttctgggga
aaatgcaccgacgatggcacggtgattgagcattatggtcgtcgttgccagggctggcag
gcggacgaacaagggcggcggcaacaatgcgattaccgtttccgcttcaaaagctgcccg
cattgcggcgccgaaaacgacattgccgcccgacgctgtcagacgtgcgaagcggtgctg
gtcgatccggacgacatgttgaaagcggcgctaaaactgaaagatgcactggtgctgcgc
tgcagcggcatgaacctgcaacacggcgccgacgccaaaggcgaatggctgcgcatcacc
tactacgacgaagacggcgccgacgtcagcgaacgtttccggctgcacaccgccgctcag
cgcaacgcctttacgcatgtgtttctgcgggcgcatcagcgcgcgcccggcgtgcccttc
cactggcagcatgctgacgatgtggtggcgcagcaggcgctgctgcgcgcgccggatttc
gtggtggcccgtttacagggcaaattctggcaggtacgggaaaagatcttcgattatcag
ggccgctatcgccgcgcccatgaactgcgcggctag

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