Dickeya solani IPO 2222: A4U42_18100
Help
Entry
A4U42_18100 CDS
T04410
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_18100
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A4U42_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
zf-ribbon_3
DZR
KorB
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANE77078
LinkDB
All DBs
Position
complement(4212430..4214205)
Genome browser
AA seq
591 aa
AA seq
DB search
MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE
LVEQNHAKYCALGLQADIFAAGLNQRDSDGKVVFGSVQSVARHPDKFDDAFSLLIVDECH
RISDDEDSQYQQIIQHLQRANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDSCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSNGLFSNGLFSDVELNRELKRQQ
RVTPQIVRQITEYAANRRGVMIFAATVEHAREVEGLLPTGEAALISGETPAPQRDALIAA
FKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFPGKTDCLILD
YAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCSFANLFWGKCTDDGTVIEHYGRRCQGWQ
ADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQTCEAVLVDPDDMLKAALKLKDALVLR
CSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRNAFTHVFLRAHQRAPGVPF
HWQHADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELRG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacactgcgcccataccagcaagaagcggttgacgccacccttgcctatttt
cgccagcacaccgctccggcggtgatcgttttacccaccggcgccggcaaaagcctggtg
atcgccgagctggcgcggctggcgcgcggccgggtattggtgctggcgcacgtcagggaa
ctggtggagcagaatcacgccaaatattgcgcgctggggctacaggcggacattttcgcc
gccgggcttaaccagcgcgacagcgacggcaaggtggtgtttggcagcgtgcagtcggtg
gcgcggcaccccgacaaatttgatgacgctttctcgttgctgatcgtcgatgaatgtcac
cggattagcgacgatgaagacagtcagtaccagcaaatcatccagcatttacagcgggcc
aatccccagttgcgactgctgggattgaccgccaccccttatcgcctcggccggggctgg
atctatcagtaccactatcacggcatgatccgcggcgacgatagctgcctgtttcgcgac
tgcatctacgagctgccgctgcgctacatgattcggcacggttttctggtgccgccggag
cggctggacatgccggtagtgcagtacgactttagccaactggcggcgcgcagcaatggg
ttgttcagcaatggactgttcagtgatgtggagctgaaccgcgagttgaagcgtcagcag
cgagtcacgccacaaattgtccgccagattaccgagtacgccgctaaccgacgcggcgtg
atgattttcgccgccacggtcgaacacgcgcgggaagtcgaagggctgctgccgaccggc
gaagcggcgttgatcagcggcgaaacgccggcaccgcagcgggatgcgctgatcgccgcc
ttcaagcagcaacagttgcgctatctggttaacgtgtcggtgctgaccaccggtttcgat
gcgccgcacgtcgatgtgatcgccattttgcgcccgacggaatccgtcagcctctaccag
caaatcatcggccgcggcctgcgcctgtttcccggcaaaaccgactgcctgattctcgac
tacgccggtaatccgtttgatctttacacgcccgaagtcggccacagcaaaccgcacagc
gacagccagccggtgcaggtgttctgcccgcagtgcagcttcgccaacctgttctgggga
aaatgcaccgacgatggcacggtgattgagcattatggtcgtcgttgccagggctggcag
gcggacgaacaagggcggcggcaacaatgcgattaccgtttccgcttcaaaagctgcccg
cattgcggcgccgaaaacgacattgccgcccgacgctgtcagacgtgcgaagcggtgctg
gtcgatccggacgacatgttgaaagcggcgctaaaactgaaagatgcactggtgctgcgc
tgcagcggcatgaacctgcaacacggcgccgacgccaaaggcgaatggctgcgcatcacc
tactacgacgaagacggcgccgacgtcagcgaacgtttccggctgcacaccgccgctcag
cgcaacgcctttacgcatgtgtttctgcgggcgcatcagcgcgcgcccggcgtgcccttc
cactggcagcatgctgacgatgtggtggcgcagcaggcgctgctgcgcgcgccggatttc
gtggtggcccgtttacagggcaaattctggcaggtacgggaaaagatcttcgattatcag
ggccgctatcgccgcgcccatgaactgcgcggctag
DBGET
integrated database retrieval system