Dickeya solani IPO 2222: A4U42_20810
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Entry
A4U42_20810 CDS
T04410
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00250
Alanine, aspartate and glutamate metabolism
dso00310
Lysine degradation
dso00350
Tyrosine metabolism
dso00650
Butanoate metabolism
dso00760
Nicotinate and nicotinamide metabolism
dso01100
Metabolic pathways
dso01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A4U42_20810 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A4U42_20810 (gabD)
00310 Lysine degradation
A4U42_20810 (gabD)
00350 Tyrosine metabolism
A4U42_20810 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A4U42_20810 (gabD)
Enzymes [BR:
dso01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A4U42_20810 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A4U42_20810 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A4U42_20810 (gabD)
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Motif
Pfam:
Aldedh
LTXXQ
DUF742
Motif
Other DBs
NCBI-ProteinID:
ANE77574
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Position
complement(4861880..4863340)
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AA seq
486 aa
AA seq
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MQLKNKTLFRQQCLIGGEWQDSLNGERLSVTNPATGTALGSIPLATAEQTQQAITAAGQA
LTAWRQRTGKERAALMQAWAQLIRANQDDLAAILTAEQGKSLAEASGEIAYATSFIDWFA
EEAKRVEGSVLQSPQASQRLLVIKQGIGVCAAITPWNFPAAMITRKAAPALAAGCTMIVK
PAEQTPFTALALAELAQQAGIPAGVLQVVTGDAPAVGKVLCDSPVVRKLSFTGSTEVGRI
LMAQCAPTVKKLSLELGGNAPFIVFDDADLEQAIKGILASKFRNSGQTCVCANRIYVQRG
IYPALAARLVEEVEKLKVGDGTQPGVMQGPLIDDDAVGKVEQHIDDALSKGAKLLTGGSR
HALGGTFFTPTVIGGVTRDMRFAREETFGPVAPLFPFDDEAQAVAMANDTEFGLAAYVYT
RDAIRQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRFGIEEYLEMKYLCV
DLTPSA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaaaataaaacgttatttcgtcaacaatgcctaatcggcggcgaatggcag
gatagcctcaatggggaacgcctgagcgtgaccaaccccgcgaccggcactgcgttggga
agcattccgctggcaacggcggaacagacccagcaggcgattaccgccgccggacaggcg
ctgaccgcgtggcgtcagcgcaccggcaaagaacgcgctgcgctgatgcaggcgtgggcg
caattgattcgcgcgaatcaggacgatctggcggccattctgaccgctgaacagggcaaa
tcgctggcggaagccagcggtgaaatcgcctatgccacctcgtttatcgactggtttgcc
gaagaggccaaacgggtggaaggcagcgtgctgcaatcgccgcaggctagtcagcgtttg
ttggtgatcaagcagggtatcggcgtgtgcgccgcgatcacgccgtggaacttcccggcg
gcgatgatcacccgcaaagccgcgccggcgctggcggccggttgcaccatgatcgtcaag
ccggcggaacagacgccgtttaccgcgctggcgctggcggaactggcgcagcaggccggt
attcccgccggtgtgctgcaggtggtgaccggcgacgcgccggcggtcggtaaagtcctg
tgcgacagcccggtggtgcgcaagctgagttttaccggttccaccgaagtcggccgtatt
ctgatggcgcaatgtgcgccgacggtgaaaaagctgtcgctggagctgggtggcaatgcg
ccgttcatcgtgtttgacgatgccgacctggagcaggcgataaaaggcattttggcgtcc
aaattccgcaatagcgggcaaacctgcgtctgcgccaaccgcatttatgttcagcgcggt
atttatccagcgctggcggcccggttggtggaagaggtggagaagttgaaagtgggcgac
ggcacccagcccggcgtgatgcaaggcccgttgatcgacgacgatgcggtcggcaaagtc
gagcagcatattgacgatgcgctgtcgaaaggggcgaaactgctgaccggcggctcgcgc
cacgcgctcggcggcactttctttaccccgacggtgatcggcggcgtgacgcgcgatatg
cgtttcgcccgcgaggagacgtttggcccggtggcgccgttgttcccgtttgacgatgag
gcgcaggcggtggcgatggccaacgataccgagttcggcctggctgcctacgtctacacc
cgcgacgccattcggcagtggcgggtgccggaagcgcttgaatacggcatggtggggatc
aacaccggcctcatttccaacgaagtagcccccttcggcggggtgaaacaatcagggctg
gggcgcgaaggttcacgcttcggcatcgaggaatacctggagatgaaatatctctgcgtt
gacctcactccgtcagcctga
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