Dipodomys spectabilis (banner-tailed kangaroo rat): 122098461
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Entry
122098461 CDS
T07891
Symbol
Cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dsp00535
]
122098461 (Cspg4)
Proteoglycans [BR:
dsp00535
]
Cell surface proteoglycans
Others
122098461 (Cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122098461
NCBI-ProteinID:
XP_042524825
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
MRPGPRCPAAPALALALSLALLCSPAAPASFFGENHLQVPMATALTNINLELQFSTAQPE
ALLFLAAGQADHLLLQLLAGRLQVRLVLGPEELRLQAPGGPPVTDGAPHTVLLSIADGWA
ELSVDGLNTSAAAPGAPLEAAYGVFVGGSGGLDLPYLRGASRPLRGCLHVASLNGRSLLR
PLTPGVQEGCAEEFSAGDDVALGFSGVQSLAAFPAWQAQDEGTLELTLTTRSPRAPLAFQ
AGGRRGDFIYVDIFDGHLRAVVEKAQGTVLLHNSVPVDDGQPHEVSIRVDAQRLEISVDQ
YPTQTSNRGPLGYVEPGGHLLLGGLDVEAAGHLQGHRLGLAPPSTSLEGCVEDLRVNGRR
LGLRDAQWTRHMAAGCKNEEDEYEEDVYGQYDVLSTLAPDIWPAVELPEPCVPEPGLPPA
FTNFTRLLTIRPLAVAEGGAAWLEWRHVQPTLDLTEAEMRRSQVLFRVSRGPRHGQLELD
IPGAQARKMFTLLDVVNRKVRFVHDGSEDASDQLVLEVSVTARGPVPGCLRKGQIYLLPV
EISPVDDPPRMLFPQGGLMTILENTQKPLGPEILQAYDPDSPCESLTFQILGASTGLPVE
HRERPGEPTAEFSCQDLERGDIVYVHRRGPAQDLSLRVSDGLQASAPATLRVVAVRPTLR
VRHSTGLRLAQGSMAAITPANLSVETNAVGQDVSVLFRLTGALQFGELQKRGAGGAEGTE
WWPTQAFHQRDVDQHRVRYVSTDPARRRVDAAEDVALEVQVGQETLDNLSFPVSIQRAAV
WMRRLTPLRTRHARPEPLTAAHLEAALEEEAAAEATPSPSAFRYHLVQPPKKGNLQLRGA
RLAEGQSFTQDDVHAGRVSYVATARVSQATEDAFRFRITAPPHFSPLYTFPVHVGGDPDA
PVLTNAVLSVPEGGHATLTPQHLFIESLHGDNYAYEVIESPRHGRLAWRPPRDAAGPVTT
FTNDDLRHGLLQYQHDHSETTEDDVPFVATRQGESSGGDAAWEEVRGVFRVAIRPVNDHA
PQQAVGRVLRVARGGRRLLTTDDVAFSDADSDASDAQLVLTRKDLLFGSIVAVDDPARPV
YRFTQEDLRAGRILFVHSGADHGWLQLQVSDGQHQTTAMLEVQASEPYLRVANGSGLVVP
QGGQGTVDAAAFHLETNLDIRSGEEVHYRVTAGPRWGQLLRAGQPATAFSQQDLLGGKIL
YSHNGSLAPRDAVGLSVEAGPVRTDAILQVTIALDRTPAPPQLLRHQKIYAFQGEAARIG
REQLEVSQEAVRPADIMFSVKTPPAAGHLVSQGPDAADPRSLGPVGSFSQEDVNAGRVFY
VHTRPEAEEDAFSLDVASGLGAPLEGVLLEVEVLPRVLPLEAQNFSVPEGGARTLAPPLI
QVPGPRLSTLPGLRLHVLDPPQHGALRKEGQQRPEETLLSFSWREVEEQQILYEHDGSET
LTDRFVLVANASGIRSQSAPVAFAIAIQPVNDQPPVLTTNRGLQMWEGATVPIPPEALRG
TDSDSGPDDLVYTIEQPSNGRVALRAAPGDAVQLFTQAQLDGGLVLFSHTGALDGGFRFA
LSDGAHTSPGHFFRVTAQKQVLLSLDGSRTLTVCPESVQTLSSQSLRASSSAGTEPGHLL
FRVLRGPQLGRLLRQQGGSAEPLLNFSQAEVYAGHVLYEHQASPEPFWEAQDTIELALSS
PPAPDVAVTLAVTVTFQAACPQRPSRLWRNKGLWVPEGQRAAITPAALDAANFLASVPAA
QRPEHDVLFQLTQFPTRGQLWASGEPLHAGSPHFLQSQLAAGQLVYAHGGGGTQPDSFRF
RAQLRGPAGVSATAPHTSEAFAITVRDVNERPPQPQASAPLRLTRGSRAPISRAQLSVVD
PDSAPEEIQYQVQRAPHNGFLSLAGGSPGPVARFTQADVDGGRLAFVANGSSVAGVLELS
VSDGASPPLPVSLAVEVLPSTLEVQTQAPLEVPQASGRSPLSQQQLQVFSDRPEPDVAYR
MTQGPRHGQLLVGGRPASAFSQLQVDRGEVIFTFTNFSSPHDRFGVLALARGANATATVN
VTVRALLRVWPGGPWPQGATLRLDRSVLDAGELANLTGTVPHFRLLQGPQHGRVVPTSQA
RTESRNSQLVEGFTQRDLEAGRLGLEVDRPEGPPGPVADRLTLELWAPGVPPAVASVDFI
TEPYDAARSYGVALLRVPKVVRMEAGKPEGSSPTGQPGPAAASPGPTAARGGFLGFLEAN
MFSIIIPVCLVLLLLALILPLLFYLRKRNKTGKHHVQVLTAKPRNGFAGDTETFRKVEPG
QAIPLTAVPGQGPPPGGQPDPELLQFCRTPNPALRNGQYWV
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccggcccgcggtgcccggccgccccggcgctggcgctggccctgagcctggcc
ctgctgtgcagccccgcggcgcccgcctccttcttcggtgagaaccacctgcaggtgccc
atggccacagccctgaccaacatcaaccttgaacttcagttctccacggctcagcccgaa
gcgctcctcttcctggcggcgggccaggctgaccatctcctgctccagctcctggccggg
cgcctgcaggtgagactcgtcctgggcccggaggagctgaggctgcaggccccgggagga
ccgcctgtgaccgacggcgccccgcacaccgtgttgctctcaatcgctgacggctgggcc
gagctctccgtggacggactaaacacctcggctgcggccccgggagccccgctggaggcc
gcctatggggtgttcgtggggggctcggggggcctagacctgccctacctgcggggagcg
agccgcccactgagaggctgcctccacgtcgccagcctcaacggacggagcctcctgcgg
cccctgactcccggggtgcaggagggctgcgcggaggagttctccgcgggggacgacgta
gctttggggttctccggggtgcagtcgctggctgccttccccgcctggcaggctcaggac
gagggcaccctggagctgaccctcaccacgcgcagcccgcgggcgccgctggccttccag
gcgggcgggcggcgcggggacttcatctacgtggacatctttgacggccacctgcgcgcc
gtggtggagaaagcccagggtaccgtgctcctgcacaacagcgtgcccgtggatgacggc
cagccccacgaggtcagcatccgcgtggacgcccagcggctggagatctccgtggatcag
taccccacccagacttccaatcgcgggcctctcggttatgtggaacccgggggtcacctc
ctgctcggggggctggacgtggaggccgccgggcatctccaggggcaccgcctgggcctg
gcgccgcccagcacctccctggagggctgcgtggaggatctgcgtgtgaatggacgcaga
ctcggactccgtgacgcgcagtggacacgccacatggcggctggctgcaagaatgaggaa
gatgagtatgaggaggatgtctacggccagtacgacgtgctctccaccctggcgcccgac
atctggccagctgtggagctgcctgagccctgcgtccccgagcccggcctgcccccggcc
ttcaccaacttcacgcggctgctgaccatccgcccgctggccgtggccgagggcggcgcg
gcgtggctggaatggcggcacgtgcagcccacgctggacctgaccgaggccgagatgcgc
agatcccaggtcctgttccgggtgagccggggaccccgccacggccagctggagctggac
atccccggtgcccaggcccggaagatgttcaccctgctggacgtggtcaaccgcaaggtc
cgcttcgtccacgatggctccgaggacgcatctgaccagctggtactagaggtgtccgtg
acggcacgggggccggtgcccggctgcctgcgcaaaggccagatttacctcctgcccgtc
gagatcagcccggtggacgaccctccacgcatgctcttcccgcaaggcggcctcatgacg
attctagaaaacacccagaagcccctagggcctgagatcttacaggcctatgacccagat
tccccctgtgagagcctcaccttccagatcctcggggcctccaccggcctccccgtggag
catcgagagcggcccggggaacccaccgccgagttctcctgccaggatctggagagaggc
gacatagtctacgtgcaccgccgcggccccgcgcaggacctgagcttgcgggtcagcgat
gggctgcaggccagcgccccggccacgctgcgggttgtggcggtgcggcccacgctccgt
gtccgccacagcaccgggctgcgcctggcccagggctcgatggcggccatcacgccggcc
aacctgtcggtggagaccaacgcggtgggccaggacgtgagcgtgctgttccggctgacg
ggggccttgcagtttggggagctgcagaagcggggggccggcggggcggagggcacggag
tggtggcccacgcaggccttccaccagcgcgacgtggaccagcaccgcgtgcgctacgtg
agcaccgatcccgcgcgccggcgcgtggacgcggccgaggacgtggcgctggaggtgcag
gtggggcaggagacgctggacaacctgtccttccccgtgtctatccagcgggccgccgtg
tggatgcggcgcctgacgcctctgcgcacgcgccacgcccggcccgagccgctgaccgct
gcgcacctggaggccgccctggaggaggaggcggcggcggaggccaccccgagccccagc
gccttccgctaccacctcgtgcagccccccaagaagggcaacctgcagctccggggtgcc
aggctggccgagggccagagcttcacgcaggacgacgtccacgcgggccgggtcagctac
gtggccacggcacgtgtgtcccaggccacggaggacgccttccgcttccggatcacggcc
cccccccacttctccccgctctacaccttccccgtccacgtgggcggcgacccggacgcc
ccggtgctcaccaatgccgtgctgtccgtgcccgagggcggccacgccacgctgaccccg
cagcacctgttcatcgagagcctccacggcgacaactacgcgtacgaggtgatcgagagc
ccccgccacgggcggctggcgtggcggcccccgcgggacgccgccgggcccgtgaccacc
ttcaccaacgacgacctgcgtcacggcctcctgcagtaccagcacgaccactccgagacc
acggaagacgacgtcccgttcgtggccacgcgccagggcgagagcagcggcggcgacgcg
gcgtgggaggaagtccggggcgtcttccgcgtggccatccggcccgtgaacgaccacgcg
ccccagcaggcggtcggccgcgtgctgcgcgtggcgcggggcggccggcggctgctgacc
accgacgacgtggccttcagcgacgccgactcggacgccagcgacgcgcagctggtgctc
acgcgcaaggatctcctcttcggcagcatcgtggcggtggacgaccccgccaggcccgtg
taccgcttcacgcaggaggacctgcgggccgggaggatcctctttgtgcactccggggcc
gaccacggctggctgcagctgcaggtgtctgacgggcagcaccaaaccaccgccatgctg
gaagtccaggcctcggagccctacctccgcgtggccaacggctcgggcctcgtggtgccg
cagggcggccaaggcaccgtcgacgcggccgcattccacctggaaaccaacttggatatc
cgcagcggagaggaggtccactaccgagtcacggcgggcccgcgctggggacagctgctc
cgagccggccagccggccaccgccttctcccagcaggatctgctgggtgggaagattctc
tacagccataatggcagcctcgctcctcgggacgctgtggggctctccgtggaggcgggc
ccagtgcgcacagacgccatcctacaggtgaccatcgcgctggaccgcacgccggccccg
ccgcagctgctcagacaccagaagatctacgccttccagggagaagcagcgaggatcgga
agagagcagctggaggtgtctcaggaggccgtgcgcccggcggacatcatgttctcggtg
aagacgcccccggctgccggccacctggtgtcccagggccctgatgcggccgatccccgc
agcctgggccccgtggggagcttctcccaggaggacgtgaatgcgggcagggtcttctac
gtgcacactcgccccgaggctgaggaggacgccttctccctggacgtggcctccggcctt
ggcgcccccctggaaggcgtcctcttggaggtggaggtactgcccagagtcttacccctg
gaggcccagaacttcagcgttcccgagggcggagcgcgcaccttggctccgcccctgatc
caggtccccgggccacgcctctccacactgcccggcctccggctgcacgtgctggacccg
ccccagcacggggccctgcggaaggaggggcagcagcggccagaggagaccctactcagc
ttttcctggagagaggtggaagaacagcagattctctatgagcacgatggaagcgagacg
cttacggatcgcttcgtgctggtggccaacgcctcgggcatccgcagccagagcgcgccc
gtggccttcgccatcgccatccagccggtgaacgaccagcctcccgtcctcaccacaaac
aggggcctgcagatgtgggagggggccaccgtgcccatcccccccgaggccctcaggggc
acggacagcgactcagggcccgatgacctggtctacaccatcgagcagcccagcaacggc
cgcgtggcgctgcgggcggcgccgggcgacgcggttcagctcttcacccaggcgcagctg
gacggcggcctggtgctgttctcacacacaggggccctggacggaggcttccgctttgcc
ctctccgacggtgcgcacacatctcctggacacttcttccgggtgaccgcgcagaagcag
gtgctcctctcgctggacggcagccggacactgaccgtgtgcccagagtccgtccagacg
ctgagcagccagagtctgcgggccagctccagcgccggcacggagcccgggcacctgctg
tttcgggtgctgcggggtccccagctcggccggctcctccggcagcagggcggctctgcg
gagcccctgctgaacttctcccaggccgaggtctacgcagggcatgttctgtacgagcac
caggcgtcccctgagcctttctgggaagcccaggacaccatagaactcgcgctgtcctcg
ccgcccgccccggacgtggccgtgaccctggctgtgactgtgaccttccaggccgcctgt
ccccagcgtcccagccgcctttggagaaacaaaggtctctgggtccccgagggccagcga
gcggccatcaccccagccgccctggacgccgccaacttcctggccagcgtccccgcggcc
cagcgtcctgagcacgatgtcctgttccagctgacacagttccccacgcgcggccagctg
tgggcatctggggagcccctccacgccgggagcccccacttcctgcagtcccagctggcc
gcggggcagctggtgtacgcccacggcggcgggggcacccagccggacagcttccgcttc
cgtgcccagctccggggtccagcgggggtctcggcaacggcaccccacacctccgaggcc
ttcgccatcaccgtccgcgatgtgaacgagcggccaccccagccccaggcctccgccccc
ctccgcctcacccgcggctcccgggcccccatctctagagctcagctgagcgtggtggat
cccgactctgccccagaggagatccaataccaggtgcagcgggcaccccacaacggcttc
ctgagcctggcggggggcagcccggggcccgtggcccgcttcacgcaggccgacgtggac
ggaggccgcctggctttcgtggccaatgggagcagcgtggcgggggtcctggagctgagc
gtgagcgacggggccagccccccgctgcccgtgtccctggctgtggaggtcttgccatcc
accctcgaggtgcagacccaagcacccctggaggtgccccaagcatcggggcgctctcct
ctgagccagcagcagctgcaggtgttttctgaccggcccgagccggacgtggcgtaccgc
atgacccagggaccccggcacgggcagctgctggtcggggggcggcccgcctcggccttc
agccagctccaggtggaccggggggaggtgatctttaccttcaccaacttctcctcgccc
cacgatcgcttcggggtcctggcgctggccaggggtgccaacgcgacggccaccgtcaac
gtcacggtgcgcgctctcctgcgcgtgtggcctggtgggccgtggccccagggcgccacc
ttgcgtctggaccgcagcgtgctggacgccggcgagctggccaacctcacaggcactgtc
ccccatttccggctcctccaggggccccaacacggtcgcgtggtccccacgagccaggcc
cggacagaatccagaaacagccagctggtggaaggcttcactcagcgagatctggaggcc
gggaggctgggcctggaggtggacaggcccgagggccctcccggcccggtcgctgaccgc
ctcaccctggagctgtgggcgcccggcgtccctccggccgtggcctccgtggatttcatc
accgagccttacgacgcagcgcgctcatacggcgtggccctgctccgtgtccccaaggtg
gtgaggatggaagcgggcaagccggaggggagcagccccaccgggcagccaggccccgcg
gcggccagccccgggcccaccgcggccaggggcggcttcctggggttcctggaggccaat
atgttcagcatcatcatccccgtgtgcctcgtgctgctgctcctggcgctcatcctgccg
ctgctcttctacctgcgcaagcgcaacaagaccggcaagcaccacgtccaggtgctgacc
gccaagccgcgcaacggcttcgccggcgacaccgagaccttccgcaaggtggagcccggc
caggcgatccccctcaccgccgtgcccggccaaggccccccacccgggggacagcccgac
cccgaactgctccagttctgccggacacccaaccctgccctcaggaacggccagtactgg
gtgtga
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